Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 0.0e+00 1429.1 732 100.0
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1283.9 734 89.9
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 0.0e+00 1282.7 734 90.3
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1275.8 732 89.6
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1264.2 732 88.8
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 0.0e+00 1238.8 705 90.2
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 0.0e+00 1144.0 734 79.7
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 0.0e+00 1094.7 755 76.4
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 2.3e-275 952.2 745 66.8
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 5.2e-275 951.0 737 66.6
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 1.1e-269 933.3 739 67.4
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 7.2e-269 930.6 737 66.9
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 3.6e-268 928.3 737 67.6
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 2.3e-267 925.6 742 66.2
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 1.2e-263 913.3 743 67.0
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 2.0e-263 912.5 798 62.9
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 3.5e-263 911.8 752 65.6
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 5.5e-261 904.4 738 64.6
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 7.2e-261 904.0 716 66.2
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 2.6e-258 895.6 750 63.2
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 2.8e-257 892.1 740 64.7
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 1.8e-256 889.4 717 65.6
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 1.7e-254 882.9 780 61.5
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 4.3e-253 878.2 780 61.3
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 3.4e-250 868.6 758 63.6
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 9.8e-250 867.1 749 63.0
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 1.1e-248 863.6 736 63.7
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 7.3e-245 850.9 748 61.2
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 6.2e-244 847.8 779 60.7
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.1e-243 847.0 779 60.8
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 2.3e-243 845.9 806 57.8
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 3.4e-242 842.0 745 61.1
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 6.4e-241 837.8 738 60.7
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 2.4e-240 835.9 767 60.0
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 3.3e-237 825.5 738 60.6
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 7.3e-237 824.3 746 61.4
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 1.6e-236 823.2 757 59.6
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 3.6e-236 822.0 745 59.5
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 4.7e-236 821.6 747 59.6
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 3.1e-235 818.9 738 60.4
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 6.8e-235 817.8 617 68.4
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 3.2e-232 808.9 813 56.7
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 8.6e-230 800.8 855 55.6
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 4.3e-229 798.5 751 59.0
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 2.8e-228 795.8 822 55.4
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 2.8e-228 795.8 824 54.9
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 1.4e-227 793.5 855 55.2
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 4.0e-227 792.0 824 55.0
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 5.8e-226 788.1 824 54.7
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 1.4e-224 783.5 711 60.8
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 1.4e-224 783.5 811 56.1
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 1.4e-224 783.5 760 56.6
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 4.2e-224 781.9 812 54.9
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 7.1e-224 781.2 813 55.8
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 7.1e-224 781.2 742 56.9
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 6.0e-223 778.1 832 53.5
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 1.3e-222 776.9 777 56.2
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 3.0e-222 775.8 756 59.3
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 3.0e-222 775.8 707 59.3
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 3.3e-221 772.3 737 57.1
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.4e-219 766.9 818 54.0
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 1.8e-219 766.5 788 55.8
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 4.0e-219 765.4 751 57.0
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 5.3e-219 765.0 830 53.6
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 3.4e-218 762.3 688 61.0
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 1.3e-217 760.4 786 55.3
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 1.4e-216 756.9 779 55.6
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 4.2e-216 755.4 739 56.8
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 4.2e-216 755.4 644 62.4
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 1.2e-215 753.8 789 55.8
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 2.7e-215 752.7 751 56.7
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 3.5e-215 752.3 796 53.1
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 6.2e-212 741.5 723 57.3
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 3.1e-211 739.2 744 54.7
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 6.9e-211 738.0 746 55.9
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 2.6e-210 736.1 744 54.8
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 4.5e-210 735.3 738 55.1
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 4.5e-210 735.3 742 55.5
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 2.2e-209 733.0 743 55.3
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 2.2e-209 733.0 743 56.0
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 3.8e-209 732.3 744 54.6
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 6.4e-209 731.5 742 55.3
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 1.9e-208 729.9 827 52.5
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 1.2e-207 727.2 745 54.5
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 1.2e-207 727.2 735 54.0
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 7.9e-207 724.5 720 56.2
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 1.9e-205 719.9 744 54.8
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 1.3e-204 717.2 734 55.0
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 4.8e-204 715.3 816 51.3
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 4.8e-204 715.3 592 63.3
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 3.1e-203 712.6 734 54.6
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 6.9e-203 711.4 736 54.1
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 1.5e-202 710.3 738 55.0
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 7.6e-202 708.0 740 54.9
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 3.8e-201 705.7 739 53.5
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 5.5e-200 701.8 735 54.1
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 5.5e-200 701.8 735 54.3
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 7.1e-200 701.4 780 52.1
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.2e-199 700.7 623 60.7
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 1.6e-199 700.3 657 57.2
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 4.6e-199 698.7 740 53.1
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 3.9e-198 695.7 846 49.9
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 2.5e-197 693.0 738 54.1
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 2.1e-196 689.9 713 56.1
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 5.8e-194 681.8 828 49.6
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 3.8e-193 679.1 742 52.3
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 1.3e-190 670.6 739 52.2
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 1.9e-184 650.2 708 52.8
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 3.1e-179 632.9 713 53.2
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 2.6e-178 629.8 634 55.0
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 9.4e-176 621.3 634 53.3
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 1.5e-173 614.0 844 45.7
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 8.2e-172 608.2 854 44.1
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 2.6e-165 586.6 445 65.4
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 1.3e-164 584.3 844 44.2
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 1.2e-157 561.2 734 47.5
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 4.5e-154 549.3 764 46.3
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 5.7e-149 532.3 769 43.4
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 8.6e-145 518.5 495 55.2
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 5.8e-133 479.2 465 56.1
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 3.1e-118 430.3 762 38.2
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 3.0e-105 387.1 462 47.6
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 3.3e-104 383.6 763 36.4
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 1.2e-90 338.6 473 42.1
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.9e-89 333.6 309 55.7
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.1e-88 332.0 481 41.6
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.6e-87 328.2 481 40.5
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.4e-86 325.1 484 40.7
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 2.9e-84 317.4 519 44.3
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 2.3e-81 307.8 521 38.6
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 6.7e-81 306.2 482 38.8
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 6.7e-81 306.2 482 38.8
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.1e-80 305.4 433 39.7
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.6e-79 301.6 474 39.0
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.8e-79 300.1 467 39.4
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 7.2e-75 286.2 607 38.6
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 5.5e-67 260.0 380 45.0
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 1.2e-53 215.7 196 51.5
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 9.1e-46 189.5 203 55.2
Actinidia16006 Actinidia chinensis HOM05D004705 ORTHO05D005595 3.0e-41 174.5 399 37.6
Nitab4.5_0000410g0350 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.3e-31 142.5 427 33.0
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 1.7e-28 132.1 89 64.0
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 5.0e-20 104.0 71 73.2
FAN08G3635 Fragaria x ananassa HOM05D004705 ORTHO05D000113 8.6e-20 103.2 53 84.9
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 8.6e-20 103.2 53 84.9
FAN21G1601 Fragaria x ananassa HOM05D000031 ORTHO05D000030 2.5e-19 101.7 63 73.0
GSVIVG01017207001 Vitis vinifera HOM05D029100 ORTHO05D016439 7.3e-19 100.1 81 56.8
FAN07G2703 Fragaria x ananassa HOM05D004705 ORTHO05D005595 1.6e-18 99.0 77 61.0
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 2.9e-15 88.2 208 33.7
Cpa.g.c42332 Carica papaya HOM05D004705 ORTHO05D005595 3.2e-14 84.7 53 66.0
Actinidia08821 Actinidia chinensis HOM05D004705 ORTHO05D005595 1.1e-09 69.7 347 28.0
unitig_26.g8886 Utricularia gibba HOM05D004705 ORTHO05D005595 2.3e-09 68.6 75 53.3
Medtr1g041460 Medicago truncatula HOM05D004705 ORTHO05D005595 2.0e-08 65.5 49 67.3
Cre17.g717400 Chlamydomonas reinhardtii HOM05D004705 ORTHO05D005595 2.9e-07 61.6 165 29.7


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