Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0135941 Rosa chinensis HOM05D004884 ORTHO05D005873 3.3e-80 301.6 148 100.0
VMungo0331G0880 Vigna mungo HOM05D004884 ORTHO05D005873 1.5e-77 292.7 148 94.6
FvH4_6g29940 Fragaria vesca HOM05D004884 ORTHO05D005873 2.0e-77 292.4 148 95.9
FAN14G1538 Fragaria x ananassa HOM05D004884 ORTHO05D005873 2.0e-77 292.4 148 95.9
MD17G1208900 Malus domestica HOM05D004884 ORTHO05D005873 2.0e-77 292.4 148 95.3
Prupe.3G084300 Prunus persica HOM05D004884 ORTHO05D005873 2.6e-77 292.0 148 95.3
Phvul.010G154800 Phaseolus vulgaris HOM05D004884 ORTHO05D005873 3.4e-77 291.6 148 93.9
Glyma.08G211500 Glycine max HOM05D004884 ORTHO05D005873 4.5e-77 291.2 148 93.9
FAN09G2574 Fragaria x ananassa HOM05D004884 ORTHO05D005873 5.9e-77 290.8 148 95.3
Lj3g0000080 Lotus japonicus HOM05D004884 ORTHO05D005873 1.0e-76 290.0 148 92.6
Psat5g301920 Pisum sativum HOM05D004884 ORTHO05D005873 1.0e-76 290.0 148 93.2
QL05p029075 Quercus lobata HOM05D004884 ORTHO05D005873 1.0e-76 290.0 147 93.9
FAN02G1988 Fragaria x ananassa HOM05D004884 ORTHO05D005873 1.3e-76 289.7 148 95.3
Eucgr.F02527 Eucalyptus grandis HOM05D004884 ORTHO05D005873 2.9e-76 288.5 148 92.6
Lalb_Chr04g0262431 Lupinus albus HOM05D004884 ORTHO05D005873 3.8e-76 288.1 148 91.9
PGR031G3479 Punica granatum HOM05D004884 ORTHO05D005873 3.8e-76 288.1 148 94.6
THA.LOC104808231 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 5.0e-76 287.7 148 92.6
Glyma.07G031300 Glycine max HOM05D004884 ORTHO05D005873 6.5e-76 287.3 148 93.2
Medtr2g103690 Medicago truncatula HOM05D004884 ORTHO05D005873 8.5e-76 287.0 148 92.6
THA.LOC104812503 Tarenaya hassleriana HOM05D004884 ORTHO05D005873 8.5e-76 287.0 148 91.2
COL.COLO4_12946 Corchorus olitorius HOM05D004884 ORTHO05D005873 1.9e-75 285.8 148 92.6
Lalb_Chr22g0350881 Lupinus albus HOM05D004884 ORTHO05D005873 5.5e-75 284.3 148 91.2
Hma1.2p1_0515F.1_g170110 Hydrangea macrophylla HOM05D004884 ORTHO05D005873 9.4e-75 283.5 148 91.2
Lsat_1_v5_gn_1_2440 Lactuca sativa HOM05D004884 ORTHO05D005873 9.4e-75 283.5 148 91.2
ECA240G3509 Erigeron canadensis HOM05D004884 ORTHO05D005873 1.2e-74 283.1 148 91.2
Dinv30589 Davidia involucrata HOM05D004884 ORTHO05D005873 2.1e-74 282.3 146 91.1
Thecc.06G021400 Theobroma cacao HOM05D004884 ORTHO05D005873 2.1e-74 282.3 148 89.9
Gohir.D10G076700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 3.6e-74 281.6 148 91.2
HanXRQChr02g0046821 Helianthus annuus HOM05D004884 ORTHO05D005873 3.6e-74 281.6 148 90.5
ECA247G2927 Erigeron canadensis HOM05D001354 ORTHO05D002582 7.9e-74 280.4 148 90.5
FAN05G0038 Fragaria x ananassa HOM05D004884 ORTHO05D005873 7.9e-74 280.4 168 84.5
GSVIVG01017313001 Vitis vinifera HOM05D004884 ORTHO05D005873 1.0e-73 280.0 148 89.9
Oeu045160.1 Olea europaea HOM05D004884 ORTHO05D005873 1.8e-73 279.3 148 89.9
CAN.G407.94 Capsicum annuum HOM05D004884 ORTHO05D005873 2.3e-73 278.9 148 87.8
Duzib235G0621 Durio zibethinus HOM05D004884 ORTHO05D005873 2.3e-73 278.9 148 89.2
Sopen03g035510 Solanum pennellii HOM05D004884 ORTHO05D005873 5.1e-73 277.7 148 87.2
Oeu052257.1 Olea europaea HOM05D004884 ORTHO05D005873 6.7e-73 277.3 148 89.2
Ciclev10026708m.g Citrus clementina HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 89.9
Cc04_g04240 Coffea canephora HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 89.2
SalBow3G1656 Salvia bowleyana HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 89.2
Solyc03g116600.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 86.5
Solyc06g068080.4 Solanum lycopersicum HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 87.8
Sopen06g025360 Solanum pennellii HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 87.8
PGSC0003DMG400028511 Solanum tuberosum HOM05D004884 ORTHO05D005873 1.1e-72 276.6 148 87.8
Gohir.A10G074700 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.5e-72 276.2 148 89.9
MSTRG.9432 Avicennia marina HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 87.8
PGSC0003DMG400000635 Solanum tuberosum HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 86.5
SGA_v2.0_scaffold117G32369 Striga asiatica HOM05D004884 ORTHO05D005873 2.0e-72 275.8 148 89.2
Potri.001G193100 Populus trichocarpa HOM05D004884 ORTHO05D005873 2.6e-72 275.4 148 88.5
Rhsim10G0061400 Rhododendron simsii HOM05D004884 ORTHO05D005873 2.6e-72 275.4 146 87.7
Sabra01G0135700 Salix brachista HOM05D004884 ORTHO05D005873 2.6e-72 275.4 148 88.5
Atru.chr1.2995 Acer truncatum HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 89.2
Aqoxy1G02408 Aquilegia oxysepala HOM05D004884 ORTHO05D005873 3.3e-72 275.0 146 89.7
Migut.D01065 Erythranthe guttata HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 88.5
PSO455G0277 Papaver somniferum HOM05D004884 ORTHO05D005873 3.3e-72 275.0 148 89.9
CSS0003587 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 4.4e-72 274.6 146 89.0
Carub.0001s1514 Capsella rubella HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 85.8
vmacro20098 Vaccinium macrocarpon HOM05D004884 ORTHO05D005873 4.4e-72 274.6 148 87.8
AL1G27470 Arabidopsis lyrata HOM05D004884 ORTHO05D005873 7.4e-72 273.9 146 87.0
AT1G15370 Arabidopsis thaliana HOM05D004884 ORTHO05D005873 7.4e-72 273.9 146 87.0
Manes.04G114100 Manihot esculenta HOM05D004884 ORTHO05D005873 9.7e-72 273.5 146 89.0
PSO170G2441 Papaver somniferum HOM05D004884 ORTHO05D005873 1.3e-71 273.1 148 89.2
CARHR015900 Cardamine hirsuta HOM05D004884 ORTHO05D005873 2.2e-71 272.3 146 86.3
Sp1g13700 Schrenkiella parvula HOM05D004884 ORTHO05D005873 2.2e-71 272.3 148 85.8
Actinidia18100 Actinidia chinensis HOM05D004884 ORTHO05D005873 2.8e-71 271.9 146 86.3
BcaB03g14545 Brassica carinata HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
BcaC05g25475 Brassica carinata HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
BcaC05g25490 Brassica carinata HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
A06p11400 Brassica napus HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
A09p61460 Brassica napus HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
C05p13510 Brassica napus HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
C08p45030 Brassica napus HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
BolC5t30088H Brassica oleracea HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
BraA06t24317Z Brassica rapa HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
BraA09t41517Z Brassica rapa HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
Thhalv10009024m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 2.8e-71 271.9 148 85.8
BcaC07g41506 Brassica carinata HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 85.1
BolC8t52049H Brassica oleracea HOM05D004884 ORTHO05D005873 1.1e-70 270.0 148 85.1
CiPaw.08G011500 Carya illinoinensis HOM05D004884 ORTHO05D005873 1.4e-70 269.6 147 85.7
Peaxi162Scf00207g00728 Petunia axillaris HOM05D004884 ORTHO05D005873 1.4e-70 269.6 148 86.5
Thhalv10019295m.g Eutrema salsugineum HOM05D004884 ORTHO05D005873 5.3e-70 267.7 148 84.5
MBI04_g07835_MAGBIO Magnolia biondii HOM05D004884 ORTHO05D005873 9.1e-70 266.9 146 86.3
ClCG05G016940 Citrullus lanatus HOM05D004884 ORTHO05D005873 1.2e-69 266.5 148 85.8
MELO3C003694.2 Cucumis melo HOM05D004884 ORTHO05D005873 1.2e-69 266.5 148 85.8
AUR62012381 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.5e-69 266.2 148 84.5
TAR636G0424 Trochodendron aralioides HOM05D004884 ORTHO05D005873 2.0e-69 265.8 146 84.9
unitig_747.g21296 Utricularia gibba HOM05D004884 ORTHO05D005873 2.0e-69 265.8 148 81.8
CsaV3_3G046450 Cucumis sativus L. HOM05D004884 ORTHO05D005873 2.6e-69 265.4 148 85.1
TWI75G0638 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 7.7e-69 263.8 148 82.4
Nn2g12037 Nelumbo nucifera HOM05D004884 ORTHO05D005873 1.3e-68 263.1 148 83.8
CDE04G3015 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 2.2e-68 262.3 146 84.2
Sed0027624 Sechium edule HOM05D004884 ORTHO05D005873 3.8e-68 261.5 148 83.8
Cfa013154 Carpinus fangiana HOM05D004884 ORTHO05D005873 6.5e-68 260.8 148 82.4
QL02p021869 Quercus lobata HOM05D004884 ORTHO05D005873 6.5e-68 260.8 147 82.3
Glyma.15G008700 Glycine max HOM05D004884 ORTHO05D005873 1.1e-67 260.0 130 93.8
Nitab4.5_0013106g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.1e-67 260.0 139 89.9
Zm00001eb064920 Zea mays HOM05D004884 ORTHO05D005873 1.1e-67 260.0 146 84.9
Solyc11g008330.3 Solanum lycopersicum HOM05D004884 ORTHO05D005873 9.4e-67 256.9 148 81.8
EL10Ac2g04219 Beta vulgaris HOM05D004884 ORTHO05D005873 2.7e-66 255.4 158 77.2
TWI34G0752 Tripterygium wilfordii HOM05D004884 ORTHO05D005873 3.0e-65 251.9 148 77.7
Aa31LG4G430 Aethionema arabicum HOM05D004884 ORTHO05D005873 3.9e-65 251.5 133 88.0
arahy.Tifrunner.gnm1.ann1.Q10AU9 Arachis hypogaea HOM05D004884 ORTHO05D005873 3.3e-64 248.4 131 92.4
arahy.Tifrunner.gnm1.ann1.W4DERE Arachis hypogaea HOM05D004884 ORTHO05D005873 3.3e-64 248.4 131 92.4
Sed0022166 Sechium edule HOM05D004884 ORTHO05D005873 3.3e-64 248.4 140 83.6
Gohir.D06G099800 Gossypium hirsutum HOM05D004884 ORTHO05D005873 4.8e-63 244.6 144 79.2
AUR62031521 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.1e-62 243.4 198 63.1
Gorai.010G114700 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.1e-62 241.9 144 77.8
CSS0011163 Camellia sinensis var. sinensis HOM05D004884 ORTHO05D005873 9.1e-62 240.4 129 85.3
Nitab4.5_0001764g0110 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.2e-61 240.0 123 94.3
Dinv38109 Davidia involucrata HOM05D000250 ORTHO05D002477 1.6e-61 239.6 124 91.1
Gorai.011G082800 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.5e-61 238.4 124 93.5
ATR1120G077 Amborella trichopoda HOM05D004884 ORTHO05D005873 4.5e-61 238.0 135 80.7
Actinidia36285 Actinidia chinensis HOM05D004884 ORTHO05D005873 1.5e-59 233.0 124 87.9
SalBow6G6988 Salvia bowleyana HOM05D004884 ORTHO05D005873 5.5e-59 231.1 122 91.8
Sc23g0006790 Simmondsia chinensis HOM05D004884 ORTHO05D005873 5.5e-59 231.1 124 87.1
EL10Ac9g22900 Beta vulgaris HOM05D004884 ORTHO05D005873 4.7e-58 228.0 148 73.0
AUR62012868 Chenopodium quinoa HOM05D004884 ORTHO05D005873 1.4e-57 226.5 146 73.3
Peaxi162Scf00332g00767 Petunia axillaris HOM05D004884 ORTHO05D005873 1.8e-57 226.1 130 84.6
Peaxi162Scf00145g01210 Petunia axillaris HOM05D004884 ORTHO05D005873 8.8e-57 223.8 130 80.0
Sabra06G0198100 Salix brachista HOM05D004884 ORTHO05D005873 4.4e-56 221.5 124 81.5
SMO143G0054 Selaginella moellendorffii HOM05D004884 ORTHO05D005873 4.4e-56 221.5 146 70.5
Nitab4.5_0006187g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.7e-55 219.5 130 78.5
Potri.006G253700 Populus trichocarpa HOM05D004884 ORTHO05D005873 5.9e-53 211.1 148 68.9
CAN.G321.60 Capsicum annuum HOM05D004884 ORTHO05D005873 2.9e-52 208.8 121 78.5
Pp3c18_11860 Physcomitrium patens HOM05D004884 ORTHO05D005873 1.5e-51 206.5 146 64.4
CDE06G1547 Ceratophyllum demersum HOM05D004884 ORTHO05D005873 4.0e-49 198.4 118 79.7
AagrBONN_evm.TU.Sc2ySwM_368.2705 Anthoceros agrestis HOM05D004884 ORTHO05D005873 2.6e-48 195.7 145 62.8
QL05p029040 Quercus lobata HOM05D004884 ORTHO05D005873 1.1e-46 190.3 113 81.4
Mapoly0005s0226 Marchantia polymorpha HOM05D004884 ORTHO05D005873 3.1e-46 188.7 146 56.2
Gorai.001G184900 Gossypium raimondii HOM05D004884 ORTHO05D005873 5.5e-43 177.9 148 63.5
Gohir.D07G161600 Gossypium hirsutum HOM05D004884 ORTHO05D005873 8.0e-42 174.1 148 62.8
BcaC07g41508 Brassica carinata HOM05D004884 ORTHO05D005873 1.8e-41 172.9 119 72.3
Sopen11g004140 Solanum pennellii HOM05D004884 ORTHO05D005873 2.3e-41 172.6 148 61.5
Nitab4.5_0005235g0010 Nicotiana tabacum HOM05D004884 ORTHO05D005873 1.7e-39 166.4 119 68.1
CBR_g8585 Chara braunii HOM05D004884 ORTHO05D005873 1.6e-37 159.8 143 53.8
Oeu024660.1 Olea europaea HOM05D004884 ORTHO05D005873 3.3e-35 152.1 82 90.2
Gohir.D13G076450 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.1e-34 149.4 84 81.0
Gorai.013G087100 Gossypium raimondii HOM05D004884 ORTHO05D005873 3.4e-32 142.1 89 76.4
Haze_21525 Corylus avellana HOM05D004884 ORTHO05D005873 1.2e-26 123.6 152 47.4
Nitab4.5_0001450g0150 Nicotiana tabacum HOM05D004884 ORTHO05D005873 2.8e-26 122.5 86 68.6
DCAR_015322 Daucus carota HOM05D004884 ORTHO05D005873 3.7e-23 112.1 58 91.4
Nitab4.5_0000620g0040 Nicotiana tabacum HOM05D004884 ORTHO05D005873 6.4e-23 111.3 65 84.6
Gohir.A13G076901 Gossypium hirsutum HOM05D004884 ORTHO05D005873 2.1e-21 106.3 128 51.6
Gohir.A06G098210 Gossypium hirsutum HOM05D004884 ORTHO05D005873 7.8e-21 104.4 63 79.4
Nn8g39461 Nelumbo nucifera HOM05D004884 ORTHO05D005873 2.3e-20 102.8 63 76.2
Hund04518 Selenicereus undatus HOM05D004884 ORTHO05D005873 2.3e-20 102.8 60 81.7
Gohir.D01G156500 Gossypium hirsutum HOM05D004884 ORTHO05D005873 1.4e-17 93.6 50 88.0
Cre12.g561200 Chlamydomonas reinhardtii HOM05D004884 ORTHO05D005873 4.0e-17 92.0 140 35.7
TPR.G29435 Trifolium pratense HOM05D004884 ORTHO05D005873 4.0e-17 92.0 46 93.5
MCO11G456 Micromonas commoda HOM05D004884 ORTHO05D005873 2.0e-16 89.7 152 34.2
PRCOL_00001860 Prasinoderma coloniale HOM05D004884 ORTHO05D005873 1.6e-13 80.1 127 35.4
CAN.G185.10 Capsicum annuum HOM05D004884 ORTHO05D005873 1.4e-09 67.0 64 56.2


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