Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0135751 Rosa chinensis HOM05D002947 ORTHO05D348539 2.4e-32 141.4 63 100.0
Duzib128G1407 Durio zibethinus HOM05D002947 ORTHO05D003447 7.9e-07 56.6 30 86.7
Ah.04g152270 Amaranthus hybridus HOM05D002947 ORTHO05D003447 1.0e-06 56.2 51 60.8
Duzib093G0113 Durio zibethinus HOM05D002947 ORTHO05D003447 1.4e-06 55.8 32 81.2
Haze_19959 Corylus avellana HOM05D002947 ORTHO05D003447 1.8e-06 55.5 62 50.0
Gohir.D09G123232 Gossypium hirsutum HOM05D002947 ORTHO05D003447 1.8e-06 55.5 33 75.8
Gorai.006G141400 Gossypium raimondii HOM05D002947 ORTHO05D003447 1.8e-06 55.5 33 75.8
arahy.Tifrunner.gnm1.ann1.5W6DG7 Arachis hypogaea HOM05D002947 ORTHO05D003447 2.3e-06 55.1 30 83.3
arahy.Tifrunner.gnm1.ann1.J02EN1 Arachis hypogaea HOM05D002947 ORTHO05D003447 2.3e-06 55.1 30 83.3
Duzib106G0869 Durio zibethinus HOM05D002947 ORTHO05D003447 2.3e-06 55.1 30 86.7
Nn7g36061 Nelumbo nucifera HOM05D002947 ORTHO05D003447 2.3e-06 55.1 30 83.3
Gohir.A09G126600 Gossypium hirsutum HOM05D002947 ORTHO05D003447 3.0e-06 54.7 32 78.1
MBI01_g15752_MAGBIO Magnolia biondii HOM05D002947 ORTHO05D003447 3.0e-06 54.7 29 86.2
VMungo1383G3623 Vigna mungo HOM05D002947 ORTHO05D003447 3.9e-06 54.3 29 89.7
Actinidia09380 Actinidia chinensis HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Actinidia20302 Actinidia chinensis HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
EL10Ac3g06951 Beta vulgaris HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
BraA07t30024Z Brassica rapa HOM05D002947 ORTHO05D003447 6.7e-06 53.5 33 75.8
CANSAT64G0379 Cannabis sativa HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
CiPaw.09G032300 Carya illinoinensis HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
CiPaw.10G028200 Carya illinoinensis HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
AUR62012070 Chenopodium quinoa HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Ca_08504_v3 Cicer arietinum L. HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
ClCG04G002320 Citrullus lanatus HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
COL.COLO4_36131 Corchorus olitorius HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
MELO3C008901.2 Cucumis melo HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
CsaV3_4G030440 Cucumis sativus L. HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Dinv14272 Davidia involucrata HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Dinv24093 Davidia involucrata HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
FvH4_6g22720 Fragaria vesca HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
FAN05G3407 Fragaria x ananassa HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
FAN09G3005 Fragaria x ananassa HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
FAN14G3985 Fragaria x ananassa HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Glyma.03G142600 Glycine max HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Glyma.03G142700 Glycine max HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Gohir.A01G194500 Gossypium hirsutum HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Gohir.A04G058700 Gossypium hirsutum HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Gohir.D01G184700 Gossypium hirsutum HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Gohir.D04G088800 Gossypium hirsutum HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Gorai.002G228100 Gossypium raimondii HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Gorai.013G212400 Gossypium raimondii HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Hma1.2p1_0812F.1_g222320 Hydrangea macrophylla HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Lju124A31T60 Lonicera japonica HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Lj1g0008821 Lotus japonicus HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
MD12G1061200 Malus domestica HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
MD14G1060900 Malus domestica HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Manes.08G046600 Manihot esculenta HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Medtr7g092810 Medicago truncatula HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Phvul.001G140300 Phaseolus vulgaris HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Phvul.001G140500 Phaseolus vulgaris HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 80.0
Prupe.7G073500 Prunus persica HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Rhsim03G0009300 Rhododendron simsii HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
RcHm_v2.0_Chr3g0480321 Rosa chinensis HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Hund24784 Selenicereus undatus HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Sc13g0002110 Simmondsia chinensis HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
Thecc.05G168100 Theobroma cacao HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
TAR362G1138 Trochodendron aralioides HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
TAR633G0049 Trochodendron aralioides HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
vmacro07937 Vaccinium macrocarpon HOM05D002947 ORTHO05D003447 6.7e-06 53.5 31 80.6
vmacro09104 Vaccinium macrocarpon HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
GSVIVG01033527001 Vitis vinifera HOM05D002947 ORTHO05D003447 6.7e-06 53.5 30 83.3
BolC8t50944H Brassica oleracea HOM05D002947 ORTHO05D003447 8.8e-06 53.1 31 80.6
VMungo1383G2267 Vigna mungo HOM05D002947 ORTHO05D003447 8.8e-06 53.1 30 80.0


User provided reference genes

Program Settings