Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 4.3e-29 130.6 63 100.0
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 5.6e-29 130.2 62 100.0
RcHm_v2.0_Chr2g0152041 Rosa chinensis HOM05D009501 ORTHO05D346335 2.0e-26 121.7 61 98.4
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 3.5e-23 110.9 86 69.8
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 1.6e-20 102.1 54 90.7
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 1.6e-20 102.1 54 90.7
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 1.6e-20 102.1 49 98.0
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 3.7e-20 100.9 48 100.0
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 3.7e-20 100.9 48 100.0
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 8.2e-20 99.8 54 88.9
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 1.8e-19 98.6 48 97.9
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 3.1e-19 97.8 54 87.0
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 4.1e-19 97.4 58 87.9
RcHm_v2.0_Chr2g0122351 Rosa chinensis HOM05D009501 ORTHO05D341307 4.1e-19 97.4 47 97.9
RcHm_v2.0_Chr2g0123441 Rosa chinensis HOM05D009501 ORTHO05D345190 4.1e-19 97.4 47 97.9
RcHm_v2.0_Chr1g0374781 Rosa chinensis HOM05D009501 ORTHO05D341958 9.0e-19 96.3 46 100.0
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 9.0e-19 96.3 47 97.9
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 2.0e-18 95.1 47 95.7
RcHm_v2.0_Chr2g0176641 Rosa chinensis HOM05D009501 ORTHO05D341879 2.0e-18 95.1 48 95.8
RcHm_v2.0_Chr2g0175061 Rosa chinensis HOM05D009501 ORTHO05D348800 1.3e-17 92.4 48 91.7
RcHm_v2.0_Chr2g0130441 Rosa chinensis HOM05D009501 ORTHO05D348382 2.1e-15 85.1 47 87.2
RcHm_v2.0_Chr2g0126821 Rosa chinensis HOM05D009501 ORTHO05D341325 2.6e-10 68.2 61 62.3
RcHm_v2.0_Chr2g0126831 Rosa chinensis HOM05D009501 ORTHO05D341994 2.6e-10 68.2 61 62.3
RcHm_v2.0_Chr2g0126591 Rosa chinensis HOM05D009501 ORTHO05D345083 3.4e-10 67.8 62 61.3
RcHm_v2.0_Chr7g0188901 Rosa chinensis HOM05D009501 ORTHO05D348402 3.4e-10 67.8 63 63.5
RcHm_v2.0_Chr2g0172821 Rosa chinensis HOM05D009501 ORTHO05D343224 1.3e-09 65.9 32 96.9
RcHm_v2.0_Chr2g0125891 Rosa chinensis HOM05D009501 ORTHO05D342573 5.0e-09 63.9 60 58.3
RcHm_v2.0_Chr2g0160391 Rosa chinensis HOM05D009501 ORTHO05D348092 1.1e-08 62.8 33 84.8
RcHm_v2.0_Chr3g0458801 Rosa chinensis HOM05D009501 ORTHO05D347237 4.2e-08 60.8 31 90.3


User provided reference genes

Program Settings