Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0133531 Rosa chinensis HOM05D041888 ORTHO05D016273 4.7e-82 307.8 150 100.0
RcHm_v2.0_Chr6g0249781 Rosa chinensis HOM05D000003 ORTHO05D000004 1.5e-16 90.1 78 50.0
FvH4_5g31282 Fragaria vesca HOM05D000003 ORTHO05D000004 1.7e-15 86.7 76 52.6
FvH4_5g08843 Fragaria vesca HOM05D000003 ORTHO05D000006 1.1e-14 84.0 76 53.9
RcHm_v2.0_Chr5g0062151 Rosa chinensis HOM05D041888 ORTHO05D016273 4.2e-14 82.0 45 86.7
FAN25G2369 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.8e-09 66.6 59 59.3
ECA240G0231 Erigeron canadensis HOM05D000162 ORTHO05D000090 9.1e-09 64.3 67 44.8
RcHm_v2.0_Chr1g0344541 Rosa chinensis HOM05D000003 ORTHO05D000004 9.1e-09 64.3 72 45.8
CSS0032657 Camellia sinensis var. sinensis HOM05D000162 ORTHO05D000090 1.5e-08 63.5 63 49.2
HanXRQChr04g0104281 Helianthus annuus HOM05D016049 ORTHO05D019812 2.0e-08 63.2 61 54.1
FvH4_6g23371 Fragaria vesca HOM05D000003 ORTHO05D000006 2.6e-08 62.8 106 33.0
QL02p063313 Quercus lobata HOM05D027572 ORTHO05D034240 3.4e-08 62.4 51 56.9
Prupe.6G087600 Prunus persica HOM05D000162 ORTHO05D000090 5.9e-08 61.6 41 70.7
MD03G1113200 Malus domestica HOM05D005643 ORTHO05D006819 1.0e-07 60.8 51 54.9
Hma1.2p1_2917F.1_g330330 Hydrangea macrophylla HOM05D000162 ORTHO05D023753 1.3e-07 60.5 43 65.1
Ca_06616_v3 Cicer arietinum L. HOM05D022470 ORTHO05D023753 2.9e-07 59.3 63 46.0
FAN21G3831 Fragaria x ananassa HOM05D000027 ORTHO05D000090 3.8e-07 58.9 47 59.6
RcHm_v2.0_Chr5g0069651 Rosa chinensis HOM05D021378 ORTHO05D000090 6.5e-07 58.2 74 44.6
Haze_03424 Corylus avellana HOM05D000027 ORTHO05D000500 8.5e-07 57.8 51 56.9
Dinv10017 Davidia involucrata HOM05D010002 ORTHO05D016273 8.5e-07 57.8 39 64.1
FAN02G0479 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.9e-06 56.6 44 61.4
FAN05G1035 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.9e-06 56.6 44 61.4
FAN14G3958 Fragaria x ananassa HOM05D002338 ORTHO05D006102 1.9e-06 56.6 44 59.1
FAN25G0292 Fragaria x ananassa HOM05D000162 ORTHO05D000090 1.9e-06 56.6 50 54.0
PSO210G3135 Papaver somniferum HOM05D008994 ORTHO05D010954 1.9e-06 56.6 55 45.5
FvH4_7g06171 Fragaria vesca HOM05D000003 ORTHO05D000006 2.5e-06 56.2 75 36.0
FAN25G2836 Fragaria x ananassa HOM05D041888 ORTHO05D016273 2.5e-06 56.2 48 56.2
HanXRQChr13g0420271 Helianthus annuus HOM05D016049 ORTHO05D003288 2.5e-06 56.2 62 43.5
Lsat_1_v5_gn_3_111001 Lactuca sativa HOM05D010002 ORTHO05D016273 2.5e-06 56.2 39 66.7
RcHm_v2.0_Chr5g0072871 Rosa chinensis HOM05D009709 ORTHO05D003288 2.5e-06 56.2 39 69.2
Dinv10019 Davidia involucrata HOM05D010002 ORTHO05D016273 3.2e-06 55.8 39 64.1
FvH4_6g11611 Fragaria vesca HOM05D015790 ORTHO05D000006 3.2e-06 55.8 78 37.2
GSVIVG01021784001 Vitis vinifera HOM05D000162 ORTHO05D000090 5.5e-06 55.1 46 56.5
EL10Ac4g09815 Beta vulgaris HOM05D016049 ORTHO05D018419 7.2e-06 54.7 67 35.8
Haze_03423 Corylus avellana HOM05D000027 ORTHO05D000500 7.2e-06 54.7 57 47.4
FvH4_1g17821 Fragaria vesca HOM05D000003 ORTHO05D046457 9.4e-06 54.3 71 32.4
Lsat_1_v5_gn_3_115200 Lactuca sativa HOM05D000162 ORTHO05D000090 9.4e-06 54.3 65 36.9


User provided reference genes

Program Settings