Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0133111 Rosa chinensis HOM05D000083 ORTHO05D000196 1.5e-21 105.1 50 100.0
RcHm_v2.0_Chr1g0357741 Rosa chinensis HOM05D000083 ORTHO05D000196 7.4e-08 59.7 43 62.8
FAN11G0825 Fragaria x ananassa HOM05D000083 ORTHO05D000196 3.7e-07 57.4 49 53.1
FAN25G2439 Fragaria x ananassa HOM05D000083 ORTHO05D000196 8.2e-07 56.2 41 61.0
ATR0317G102 Amborella trichopoda HOM05D000083 ORTHO05D000196 1.1e-06 55.8 43 55.8
FvH4_3g22070 Fragaria vesca HOM05D000083 ORTHO05D000196 2.4e-06 54.7 41 58.5
FvH4_7g15420 Fragaria vesca HOM05D000083 ORTHO05D000196 3.1e-06 54.3 43 53.5
FAN01G1122 Fragaria x ananassa HOM05D000083 ORTHO05D000196 3.1e-06 54.3 43 53.5
FAN03G0708 Fragaria x ananassa HOM05D000083 ORTHO05D000196 3.1e-06 54.3 43 53.5
FAN06G2395 Fragaria x ananassa HOM05D000083 ORTHO05D000196 3.1e-06 54.3 43 53.5
FAN06G3451 Fragaria x ananassa HOM05D000083 ORTHO05D000196 3.1e-06 54.3 43 53.5
Lj1P769T13 Lonicera japonica HOM05D000083 ORTHO05D000196 4.1e-06 53.9 37 62.2
HanXRQChr04g0127111 Helianthus annuus HOM05D000083 ORTHO05D000196 5.3e-06 53.5 45 48.9
Hma1.2p1_0067F.1_g037100 Hydrangea macrophylla HOM05D000083 ORTHO05D000196 5.3e-06 53.5 44 56.8
Hma1.2p1_1137F.1_g260700 Hydrangea macrophylla HOM05D000083 ORTHO05D000196 5.3e-06 53.5 44 54.5
BcaB02g09959 Brassica carinata HOM05D000083 ORTHO05D000196 7.0e-06 53.1 46 52.2
Lsat_1_v5_gn_7_98441 Lactuca sativa HOM05D000083 ORTHO05D000196 7.0e-06 53.1 44 50.0
Actinidia26613 Actinidia chinensis HOM05D000083 ORTHO05D000196 9.1e-06 52.8 44 52.3
Hma1.2p1_0067F.1_g037060 Hydrangea macrophylla HOM05D000083 ORTHO05D000196 9.1e-06 52.8 44 54.5
QL08p009271 Quercus lobata HOM05D000083 ORTHO05D000196 9.1e-06 52.8 41 53.7


User provided reference genes

Program Settings