Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0133051 Rosa chinensis HOM05D051649 ORTHO05D008085 3.1e-24 114.4 61 100.0
RcHm_v2.0_Chr2g0124801 Rosa chinensis HOM05D051649 ORTHO05D008085 1.2e-23 112.5 61 98.4
RcHm_v2.0_Chr4g0387891 Rosa chinensis HOM05D001654 ORTHO05D008085 3.1e-16 87.8 60 83.3
RcHm_v2.0_Chr1g0346861 Rosa chinensis HOM05D001654 ORTHO05D008085 6.9e-16 86.7 60 81.7
RcHm_v2.0_Chr5g0059041 Rosa chinensis HOM05D001654 ORTHO05D008085 1.5e-15 85.5 60 81.7
RcHm_v2.0_Chr3g0487011 Rosa chinensis HOM05D001654 ORTHO05D008085 1.7e-14 82.0 64 75.0
Prupe.3G007000 Prunus persica HOM05D001654 ORTHO05D008085 3.0e-11 71.2 60 70.0
MD17G1279000 Malus domestica HOM05D001654 ORTHO05D008085 5.7e-10 67.0 58 69.0
Prupe.6G008100 Prunus persica HOM05D001654 ORTHO05D008085 1.4e-08 62.4 50 70.0
PGR083G0503 Punica granatum HOM05D001654 ORTHO05D008085 1.5e-07 58.9 55 63.6
CiPaw.07G120500 Carya illinoinensis HOM05D001654 ORTHO05D008085 3.4e-07 57.8 58 58.6
COL.COLO4_23188 Corchorus olitorius HOM05D001654 ORTHO05D008085 1.0e-06 56.2 50 62.0
GSVIVG01028158001 Vitis vinifera HOM05D001654 ORTHO05D008085 1.7e-06 55.5 54 59.3
Cfa001520 Carpinus fangiana HOM05D001654 ORTHO05D008085 2.2e-06 55.1 58 53.4
QL12p018829 Quercus lobata HOM05D001654 ORTHO05D008085 2.9e-06 54.7 51 60.8
Thecc.01G318700 Theobroma cacao HOM05D001654 ORTHO05D008085 2.9e-06 54.7 54 55.6
TWI14G0226 Tripterygium wilfordii HOM05D001654 ORTHO05D008085 5.0e-06 53.9 50 58.0
Atru.chr5.945 Acer truncatum HOM05D001654 ORTHO05D008085 6.5e-06 53.5 51 58.8
CANSAT25G2218 Cannabis sativa HOM05D001654 ORTHO05D008085 6.5e-06 53.5 58 53.4
FvH4_1g26790 Fragaria vesca HOM05D001654 ORTHO05D008085 6.5e-06 53.5 64 54.7
FAN19G0421 Fragaria x ananassa HOM05D001654 ORTHO05D008085 6.5e-06 53.5 64 54.7
Haze_17021 Corylus avellana HOM05D001654 ORTHO05D008085 8.5e-06 53.1 58 51.7


User provided reference genes

Program Settings