Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0132911 Rosa chinensis HOM05D005969 ORTHO05D007407 1.3e-216 756.1 381 100.0
FvH4_6g28580 Fragaria vesca HOM05D005969 ORTHO05D007407 2.9e-205 718.4 382 95.0
FAN02G2588 Fragaria x ananassa HOM05D005969 ORTHO05D007407 7.2e-204 713.8 384 94.5
FAN05G1215 Fragaria x ananassa HOM05D005969 ORTHO05D007407 1.1e-175 620.2 338 93.5
MD10G1047600 Malus domestica HOM05D005969 ORTHO05D007407 2.8e-171 605.5 387 80.9
Haze_16671 Corylus avellana HOM05D005969 ORTHO05D007407 6.2e-163 577.8 391 75.7
CANSAT56G2142 Cannabis sativa HOM05D005969 ORTHO05D007407 1.8e-162 576.2 386 75.9
GSVIVG01015969001 Vitis vinifera HOM05D005969 ORTHO05D007407 4.0e-162 575.1 381 78.0
Cfa001877 Carpinus fangiana HOM05D005969 ORTHO05D007407 8.9e-162 573.9 390 75.9
CSS0032429 Camellia sinensis var. sinensis HOM05D005969 ORTHO05D007407 9.9e-161 570.5 371 77.9
Actinidia18250 Actinidia chinensis HOM05D005969 ORTHO05D007407 4.9e-160 568.2 387 74.9
CiPaw.01G255000 Carya illinoinensis HOM05D005969 ORTHO05D007407 1.1e-159 567.0 392 74.7
Potri.001G044000 Populus trichocarpa HOM05D005969 ORTHO05D007407 4.2e-159 565.1 368 76.1
Lj3g0024544 Lotus japonicus HOM05D005969 ORTHO05D007407 7.1e-159 564.3 391 74.2
TAR628G0900 Trochodendron aralioides HOM05D005969 ORTHO05D007407 9.2e-159 563.9 383 75.7
Sabra01G0030300 Salix brachista HOM05D005969 ORTHO05D007407 3.5e-158 562.0 368 75.5
Hma1.2p1_0109F.1_g052610 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 2.3e-157 559.3 385 75.1
Nn6g31679 Nelumbo nucifera HOM05D005969 ORTHO05D007407 5.1e-157 558.1 393 72.5
TWI12G1191 Tripterygium wilfordii HOM05D005969 ORTHO05D007407 2.5e-156 555.8 383 72.6
Dinv23280 Davidia involucrata HOM05D005969 ORTHO05D007407 4.3e-156 555.1 383 72.6
Lalb_Chr01g0012061 Lupinus albus HOM05D005969 ORTHO05D007407 1.6e-155 553.1 323 81.7
arahy.Tifrunner.gnm1.ann1.WI8D6W Arachis hypogaea HOM05D005969 ORTHO05D007407 2.1e-155 552.7 349 77.9
Glyma.08G219200 Glycine max HOM05D005969 ORTHO05D007407 2.1e-155 552.7 370 74.9
Duzib235G1247 Durio zibethinus HOM05D005969 ORTHO05D007407 3.6e-155 552.0 368 74.5
MELO3C023469.2 Cucumis melo HOM05D005969 ORTHO05D007407 1.4e-154 550.1 353 77.6
Gohir.A05G118900 Gossypium hirsutum HOM05D005969 ORTHO05D007407 1.4e-154 550.1 320 81.6
Medtr4g007190 Medicago truncatula HOM05D005969 ORTHO05D007407 1.8e-154 549.7 381 73.0
Psat7g262880 Pisum sativum HOM05D005969 ORTHO05D007407 1.8e-154 549.7 365 74.0
Phvul.010G161700 Phaseolus vulgaris HOM05D005969 ORTHO05D007407 3.1e-154 548.9 348 76.1
Thhalv10018762m.g Eutrema salsugineum HOM05D005969 ORTHO05D007407 4.0e-154 548.5 345 78.6
arahy.Tifrunner.gnm1.ann1.M9PPGY Arachis hypogaea HOM05D005969 ORTHO05D007407 5.3e-154 548.1 383 72.3
Gorai.009G123400 Gossypium raimondii HOM05D005969 ORTHO05D007407 1.2e-153 547.0 320 81.2
Nitab4.5_0000886g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.5e-153 546.6 377 72.9
Nitab4.5_0008962g0040 Nicotiana tabacum HOM05D005969 ORTHO05D007407 1.5e-153 546.6 328 79.6
AUR62027000 Chenopodium quinoa HOM05D005969 ORTHO05D007407 2.0e-153 546.2 358 75.7
BraA07t31457Z Brassica rapa HOM05D005969 ORTHO05D007407 3.4e-153 545.4 318 82.4
ClCG09G003350 Citrullus lanatus HOM05D005969 ORTHO05D007407 4.4e-153 545.0 353 76.8
Ciclev10025812m.g Citrus clementina HOM05D005969 ORTHO05D007407 4.4e-153 545.0 322 81.1
Atru.chr10.2417 Acer truncatum HOM05D005969 ORTHO05D007407 5.8e-153 544.7 387 72.1
COL.COLO4_26714 Corchorus olitorius HOM05D005969 ORTHO05D007407 5.8e-153 544.7 385 70.9
PGR102G2845 Punica granatum HOM05D005969 ORTHO05D007407 5.8e-153 544.7 318 81.1
Carub.0002s1982 Capsella rubella HOM05D005969 ORTHO05D007407 7.6e-153 544.3 322 81.4
CsaV3_7G031880 Cucumis sativus L. HOM05D005969 ORTHO05D007407 7.6e-153 544.3 390 72.1
Gohir.D05G119800 Gossypium hirsutum HOM05D005969 ORTHO05D007407 7.6e-153 544.3 320 80.9
VMungo0331G0028 Vigna mungo HOM05D005969 ORTHO05D007407 9.9e-153 543.9 352 74.1
Eucgr.F03965 Eucalyptus grandis HOM05D005969 ORTHO05D007407 1.3e-152 543.5 321 80.1
Solyc06g068480.3 Solanum lycopersicum HOM05D005969 ORTHO05D007407 1.7e-152 543.1 343 75.8
Sopen06g025730 Solanum pennellii HOM05D005969 ORTHO05D007407 2.9e-152 542.3 361 73.1
AT1G73060 Arabidopsis thaliana HOM05D005969 ORTHO05D007407 3.8e-152 542.0 322 81.4
AUR62030840 Chenopodium quinoa HOM05D005969 ORTHO05D007407 3.8e-152 542.0 373 73.5
ATR0807G102 Amborella trichopoda HOM05D005969 ORTHO05D007407 4.9e-152 541.6 381 71.1
BolC6t39767H Brassica oleracea HOM05D005969 ORTHO05D007407 6.4e-152 541.2 342 77.5
A07p39070 Brassica napus HOM05D005969 ORTHO05D007407 8.4e-152 540.8 315 82.2
C06p47280 Brassica napus HOM05D005969 ORTHO05D007407 8.4e-152 540.8 315 82.2
Sp5g28020 Schrenkiella parvula HOM05D005969 ORTHO05D007407 8.4e-152 540.8 345 77.7
PGSC0003DMG402028489 Solanum tuberosum HOM05D005969 ORTHO05D007407 1.4e-151 540.0 364 72.5
CAN.G1932.3 Capsicum annuum HOM05D005969 ORTHO05D007407 1.9e-151 539.7 387 69.0
Aa31LG4G3330 Aethionema arabicum HOM05D005969 ORTHO05D007407 7.1e-151 537.7 345 76.5
MBI05_g33301_MAGBIO Magnolia biondii HOM05D005969 ORTHO05D007407 1.6e-150 536.6 326 79.1
Cpa.g.sc1250.2 Carica papaya HOM05D005969 ORTHO05D007407 2.7e-150 535.8 357 75.6
EL10Ac9g22204 Beta vulgaris HOM05D005969 ORTHO05D007407 4.6e-150 535.0 334 78.1
Migut.I00689 Erythranthe guttata HOM05D005969 ORTHO05D007407 4.6e-150 535.0 383 71.3
SGA_v2.0_scaffold37G14696 Striga asiatica HOM05D005969 ORTHO05D007407 4.6e-150 535.0 358 74.0
Lsat_1_v5_gn_1_31041 Lactuca sativa HOM05D005969 ORTHO05D007407 1.0e-149 533.9 384 70.8
Sed0009912 Sechium edule HOM05D005969 ORTHO05D007407 1.0e-149 533.9 351 74.6
AL2G32810 Arabidopsis lyrata HOM05D005969 ORTHO05D007407 1.7e-149 533.1 322 80.1
PSO541G5031 Papaver somniferum HOM05D005969 ORTHO05D007407 1.7e-149 533.1 389 69.4
MSTRG.22801 Avicennia marina HOM05D005969 ORTHO05D007407 3.0e-149 532.3 378 70.4
ECA247G4019 Erigeron canadensis HOM05D005969 ORTHO05D007407 3.0e-149 532.3 316 81.3
PSO675G4447 Papaver somniferum HOM05D005969 ORTHO05D007407 3.0e-149 532.3 345 75.1
Sc12g0005780 Simmondsia chinensis HOM05D005969 ORTHO05D007407 3.0e-149 532.3 381 70.3
THA.LOC104814755 Tarenaya hassleriana HOM05D005969 ORTHO05D007407 3.9e-149 531.9 339 75.8
HanXRQChr04g0099681 Helianthus annuus HOM05D005969 ORTHO05D007407 1.9e-148 529.6 385 71.2
Cc04_g05150 Coffea canephora HOM05D005969 ORTHO05D007407 2.5e-148 529.3 358 72.6
Rhsim08G0203900 Rhododendron simsii HOM05D005969 ORTHO05D007407 2.5e-148 529.3 384 71.6
Hund06517 Selenicereus undatus HOM05D005969 ORTHO05D007407 2.4e-146 522.7 374 71.1
DCAR_021370 Daucus carota HOM05D005969 ORTHO05D007407 3.4e-145 518.8 387 69.3
FAN14G2562 Fragaria x ananassa HOM05D005969 ORTHO05D007407 9.9e-145 517.3 287 92.7
Aqoxy5G00978 Aquilegia oxysepala HOM05D005969 ORTHO05D007407 1.3e-144 516.9 376 68.9
Thecc.06G042200 Theobroma cacao HOM05D005969 ORTHO05D007407 4.2e-143 511.9 346 74.3
SalBow7G3052 Salvia bowleyana HOM05D005969 ORTHO05D007407 1.6e-142 510.0 388 66.0
CDE06G0123 Ceratophyllum demersum HOM05D005969 ORTHO05D007407 3.5e-142 508.8 388 67.0
Os02g0117100 Oryza sativa ssp. japonica HOM05D005969 ORTHO05D007407 5.1e-141 505.0 340 72.9
HPP92_025491 Vanilla planifolia HOM05D005969 ORTHO05D007407 5.1e-141 505.0 316 75.3
QL05p035856 Quercus lobata HOM05D005969 ORTHO05D007407 1.8e-138 496.5 276 85.5
Peaxi162Scf00207g00440 Petunia axillaris HOM05D005969 ORTHO05D007407 5.6e-132 474.9 379 66.0
Lj9C492T12 Lonicera japonica HOM05D005969 ORTHO05D007407 1.1e-127 460.7 268 82.1
Prupe.3G098800 Prunus persica HOM05D005969 ORTHO05D007407 1.9e-127 459.9 292 80.8
unitig_27.g25102 Utricularia gibba HOM05D005969 ORTHO05D002795 5.5e-127 458.4 274 78.8
Ah.01g024670 Amaranthus hybridus HOM05D005969 ORTHO05D007407 1.6e-123 446.8 380 64.2
HanXRQChr14g0426701 Helianthus annuus HOM05D005969 ORTHO05D007407 8.2e-123 444.5 267 80.5
vmacro19064 Vaccinium macrocarpon HOM05D005969 ORTHO05D007407 1.1e-122 444.1 259 83.0
Mapoly0001s0169 Marchantia polymorpha HOM05D005969 ORTHO05D007407 7.2e-119 431.4 325 61.5
Pp3c4_10300 Physcomitrium patens HOM05D005969 ORTHO05D007407 3.0e-117 426.0 319 63.0
HPP92_025442 Vanilla planifolia HOM05D005969 ORTHO05D007407 8.8e-117 424.5 268 73.1
Manes.11G065200 Manihot esculenta HOM05D005969 ORTHO05D007407 1.3e-115 420.6 309 71.2
AagrBONN_evm.TU.Sc2ySwM_362.432 Anthoceros agrestis HOM05D005969 ORTHO05D007407 1.6e-110 403.7 318 60.1
SMO358G0640 Selaginella moellendorffii HOM05D005969 ORTHO05D007407 1.6e-110 403.7 325 58.5
arahy.Tifrunner.gnm1.ann1.9VR9ZH Arachis hypogaea HOM05D005969 ORTHO05D007407 1.0e-104 384.4 267 71.2
arahy.Tifrunner.gnm1.ann1.5US335 Arachis hypogaea HOM05D005969 ORTHO05D007407 9.4e-103 377.9 272 68.4
HanXRQChr04g0099721 Helianthus annuus HOM05D005969 ORTHO05D007407 3.3e-100 369.4 290 66.2
CARHR066030 Cardamine hirsuta HOM05D005969 ORTHO05D007407 4.4e-92 342.4 252 67.9
arahy.Tifrunner.gnm1.ann1.79PBZ8 Arachis hypogaea HOM05D005969 ORTHO05D007407 2.8e-83 313.2 269 65.1
arahy.Tifrunner.gnm1.ann1.UJC0YQ Arachis hypogaea HOM05D005969 ORTHO05D007407 9.2e-74 281.6 267 56.2
Ca_20531_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 1.9e-71 273.9 202 66.8
MCO01G214 Micromonas commoda HOM05D005969 ORTHO05D007407 1.9e-71 273.9 323 43.0
MCO01G215 Micromonas commoda HOM05D005969 ORTHO05D007407 1.9e-71 273.9 323 43.0
Cre03.g184550 Chlamydomonas reinhardtii HOM05D005969 ORTHO05D007407 1.8e-69 267.3 311 45.7
PRCOL_00001281 Prasinoderma coloniale HOM05D005969 ORTHO05D007407 4.4e-68 262.7 338 43.2
Sc12g0008350 Simmondsia chinensis HOM05D005969 ORTHO05D007407 1.7e-67 260.8 154 81.2
Zm00001eb230040 Zea mays HOM05D005969 ORTHO05D007407 8.3e-67 258.5 165 75.2
Hma1.2p1_0109F.1_g052630 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 1.4e-66 257.7 166 79.5
Ca_20538_v3 Cicer arietinum L. HOM05D005969 ORTHO05D007407 2.6e-60 236.9 130 88.5
MCO09G747 Micromonas commoda HOM05D005969 ORTHO05D007407 9.9e-36 155.2 406 31.3
CBR_g50572 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-34 151.0 104 67.3
arahy.Tifrunner.gnm1.ann1.U87P2U Arachis hypogaea HOM05D005442 ORTHO05D006450 5.4e-34 149.4 91 74.7
HanXRQChr04g0099751 Helianthus annuus HOM05D005969 ORTHO05D007407 1.6e-30 137.9 79 82.3
SEGI_39006 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.1e-29 135.2 75 81.3
Sc12g0008300 Simmondsia chinensis HOM05D005969 ORTHO05D007407 6.9e-29 132.5 90 70.0
CBR_g50568 Chara braunii HOM05D000004 ORTHO05D000002 9.6e-23 112.1 121 47.1
arahy.Tifrunner.gnm1.ann1.4WI1XR Arachis hypogaea HOM05D005969 ORTHO05D007407 2.8e-22 110.5 105 55.2
QL04p063552 Quercus lobata HOM05D005969 ORTHO05D007407 1.9e-18 97.8 74 68.9
Glyma.07G022602 Glycine max HOM05D005969 ORTHO05D007407 8.7e-16 89.0 53 84.9
SEGI_03763 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.9e-15 87.8 67 61.2
SEGI_15560 Sequoiadendron giganteum HOM05D005969 ORTHO05D007407 1.9e-15 87.8 67 61.2
Hma1.2p1_0109F.1_g052620 Hydrangea macrophylla HOM05D005969 ORTHO05D007407 3.3e-15 87.0 54 74.1
BcaB04g17655 Brassica carinata HOM05D005969 ORTHO05D007407 4.3e-15 86.7 58 69.0
HanXRQChr14g0426781 Helianthus annuus HOM05D005969 ORTHO05D007407 5.7e-15 86.3 47 87.2
TPR.G26782 Trifolium pratense HOM05D009488 ORTHO05D011222 5.3e-13 79.7 104 50.0
Lj9C492T13 Lonicera japonica HOM05D005969 ORTHO05D007407 6.9e-13 79.3 102 51.0
PGSC0003DMG400019818 Solanum tuberosum HOM05D005969 ORTHO05D007407 9.0e-13 79.0 95 49.5
Pp3c12_7180 Physcomitrium patens HOM05D001237 ORTHO05D009110 2.0e-12 77.8 302 26.8
TPR.G23080 Trifolium pratense HOM05D005969 ORTHO05D007407 2.6e-12 77.4 46 80.4
QL05p035860 Quercus lobata HOM05D005969 ORTHO05D007407 1.7e-11 74.7 119 46.2
Psat6g223920 Pisum sativum HOM05D002710 ORTHO05D002905 3.8e-11 73.6 88 48.9
Potri.003G182801 Populus trichocarpa HOM05D005969 ORTHO05D007407 6.5e-11 72.8 75 53.3
vmacro22924 Vaccinium macrocarpon HOM05D001237 ORTHO05D009110 2.7e-09 67.4 313 25.2
Nn3g19221 Nelumbo nucifera HOM05D001237 ORTHO05D009110 1.0e-08 65.5 317 24.3
MD00G1000600 Malus domestica HOM05D001237 ORTHO05D009110 3.0e-08 63.9 310 25.2
Lj8A324T105 Lonicera japonica HOM05D001237 ORTHO05D009110 3.9e-08 63.5 360 25.3
Mapoly0052s0004 Marchantia polymorpha HOM05D001237 ORTHO05D009110 5.1e-08 63.2 301 24.6
Sed0014021 Sechium edule HOM05D001237 ORTHO05D009110 5.1e-08 63.2 303 24.8
Psat2g141080 Pisum sativum HOM05D001237 ORTHO05D009110 6.7e-08 62.8 312 23.7
Sopen08g024630 Solanum pennellii HOM05D001237 ORTHO05D009110 6.7e-08 62.8 303 25.7
arahy.Tifrunner.gnm1.ann1.GZLR9S Arachis hypogaea HOM05D005969 ORTHO05D007407 8.7e-08 62.4 33 81.8
AagrBONN_evm.TU.Sc2ySwM_344.3693 Anthoceros agrestis HOM05D001237 ORTHO05D009110 1.1e-07 62.0 266 25.9
AL8G21880 Arabidopsis lyrata HOM05D001237 ORTHO05D009110 2.5e-07 60.8 281 25.3
Aqoxy3G02614 Aquilegia oxysepala HOM05D001237 ORTHO05D009110 3.3e-07 60.5 287 24.0
Atru.chr6.1547 Acer truncatum HOM05D001237 ORTHO05D009110 4.3e-07 60.1 281 23.5
Sp2g19180 Schrenkiella parvula HOM05D001237 ORTHO05D009110 4.3e-07 60.1 281 25.3
HanXRQChr04g0099771 Helianthus annuus HOM05D005969 ORTHO05D007407 1.3e-06 58.5 42 66.7


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