Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0131641 Rosa chinensis HOM05D000143 ORTHO05D000072 2.8e-28 127.9 63 100.0
RcHm_v2.0_Chr1g0359541 Rosa chinensis HOM05D000143 ORTHO05D000072 2.6e-18 94.7 55 87.3
RcHm_v2.0_Chr1g0359391 Rosa chinensis HOM05D000143 ORTHO05D000072 4.5e-18 94.0 55 81.8
RcHm_v2.0_Chr1g0359411 Rosa chinensis HOM05D000143 ORTHO05D000072 4.5e-18 94.0 55 81.8
RcHm_v2.0_Chr1g0360181 Rosa chinensis HOM05D000143 ORTHO05D000072 4.5e-18 94.0 55 81.8
RcHm_v2.0_Chr5g0083341 Rosa chinensis HOM05D000143 ORTHO05D000072 3.2e-16 87.8 55 76.4
RcHm_v2.0_Chr1g0349441 Rosa chinensis HOM05D000143 ORTHO05D000072 7.4e-13 76.6 55 72.7
RcHm_v2.0_Chr2g0171121 Rosa chinensis HOM05D000143 ORTHO05D000072 6.9e-11 70.1 55 67.3
RcHm_v2.0_Chr4g0413611 Rosa chinensis HOM05D000143 ORTHO05D000072 9.1e-11 69.7 55 61.8
FAN05G0954 Fragaria x ananassa HOM05D000143 ORTHO05D000072 4.5e-10 67.4 45 68.9
FvH4_6g50580 Fragaria vesca HOM05D000143 ORTHO05D000072 5.9e-10 67.0 45 68.9
FAN09G4223 Fragaria x ananassa HOM05D000143 ORTHO05D000072 5.9e-10 67.0 45 68.9
FAN14G2866 Fragaria x ananassa HOM05D000143 ORTHO05D000072 5.9e-10 67.0 45 68.9
FvH4_4g13312 Fragaria vesca HOM05D000143 ORTHO05D000072 1.9e-08 62.0 48 60.4
FAN05G1765 Fragaria x ananassa HOM05D000143 ORTHO05D000072 4.2e-08 60.8 56 60.7
FvH4_6g50390 Fragaria vesca HOM05D000143 ORTHO05D000072 7.2e-08 60.1 56 60.7
FAN05G5387 Fragaria x ananassa HOM05D000143 ORTHO05D000072 2.7e-07 58.2 54 59.3
FAN14G2661 Fragaria x ananassa HOM05D000143 ORTHO05D000072 2.7e-07 58.2 54 59.3
FAN14G0550 Fragaria x ananassa HOM05D000143 ORTHO05D000072 3.6e-07 57.8 58 53.4
MD17G1035200 Malus domestica HOM05D000143 ORTHO05D000072 3.6e-07 57.8 50 54.0
A02p35730 Brassica napus HOM05D000143 ORTHO05D000072 4.6e-07 57.4 52 53.8
BraA02t08575Z Brassica rapa HOM05D000143 ORTHO05D000072 4.6e-07 57.4 52 53.8
Prupe.3G283400 Prunus persica HOM05D000143 ORTHO05D000072 7.9e-07 56.6 50 52.0
Haze_14664 Corylus avellana HOM05D004777 ORTHO05D006240 1.0e-06 56.2 39 59.0
BcaC03g17498 Brassica carinata HOM05D000143 ORTHO05D000072 2.3e-06 55.1 52 51.9
C02p54600 Brassica napus HOM05D000143 ORTHO05D000072 2.3e-06 55.1 52 51.9
BolC2t11523H Brassica oleracea HOM05D000143 ORTHO05D000072 2.3e-06 55.1 52 51.9
TWI56G0086 Tripterygium wilfordii HOM05D000143 ORTHO05D000072 3.0e-06 54.7 49 51.0
BcaC06g30939 Brassica carinata HOM05D000143 ORTHO05D000072 3.9e-06 54.3 55 50.9
BcaC06g33761 Brassica carinata HOM05D000143 ORTHO05D000072 3.9e-06 54.3 55 50.9
A06p40710 Brassica napus HOM05D000143 ORTHO05D000072 3.9e-06 54.3 55 50.9
C07p37220 Brassica napus HOM05D000143 ORTHO05D000072 3.9e-06 54.3 55 50.9
BolC7t44232H Brassica oleracea HOM05D000143 ORTHO05D000072 3.9e-06 54.3 55 50.9
BraA06t26992Z Brassica rapa HOM05D000143 ORTHO05D000072 3.9e-06 54.3 55 50.9
CDE02G1149 Ceratophyllum demersum HOM05D000143 ORTHO05D000072 5.1e-06 53.9 49 46.9
Aa31LG2G4800 Aethionema arabicum HOM05D000143 ORTHO05D000072 6.7e-06 53.5 53 49.1
Carub.0005s0654 Capsella rubella HOM05D000143 ORTHO05D000072 6.7e-06 53.5 59 47.5
QL02p076738 Quercus lobata HOM05D000143 ORTHO05D000072 6.7e-06 53.5 49 46.9
Sp2g17020 Schrenkiella parvula HOM05D000143 ORTHO05D000072 6.7e-06 53.5 55 50.9
BcaB07g30136 Brassica carinata HOM05D000143 ORTHO05D000072 8.8e-06 53.1 55 50.9
CARHR149640 Cardamine hirsuta HOM05D000143 ORTHO05D000072 8.8e-06 53.1 55 49.1


User provided reference genes

Program Settings