Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0130441 Rosa chinensis HOM05D009501 ORTHO05D348382 7.8e-32 139.8 69 100.0
RcHm_v2.0_Chr2g0175061 Rosa chinensis HOM05D009501 ORTHO05D348800 7.8e-16 86.7 47 91.5
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 3.0e-15 84.7 58 74.1
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 3.0e-15 84.7 48 87.5
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 3.0e-15 84.7 58 74.1
RcHm_v2.0_Chr2g0123441 Rosa chinensis HOM05D009501 ORTHO05D345190 3.9e-15 84.3 47 89.4
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 8.7e-15 83.2 61 70.5
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 1.1e-14 82.8 47 87.2
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 1.1e-14 82.8 47 87.2
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 1.1e-14 82.8 47 87.2
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 1.1e-14 82.8 47 87.2
RcHm_v2.0_Chr2g0152041 Rosa chinensis HOM05D009501 ORTHO05D346335 1.1e-14 82.8 47 87.2
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 1.1e-14 82.8 47 87.2
RcHm_v2.0_Chr1g0374781 Rosa chinensis HOM05D009501 ORTHO05D341958 1.5e-14 82.4 46 89.1
RcHm_v2.0_Chr2g0122351 Rosa chinensis HOM05D009501 ORTHO05D341307 2.5e-14 81.6 47 85.1
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 5.6e-14 80.5 58 70.7
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 5.6e-14 80.5 47 85.1
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 5.6e-14 80.5 47 85.1
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 5.6e-14 80.5 47 85.1
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 2.8e-13 78.2 47 83.0
RcHm_v2.0_Chr3g0466611 Rosa chinensis HOM05D013162 ORTHO05D343811 2.8e-13 78.2 69 65.2
RcHm_v2.0_Chr2g0176641 Rosa chinensis HOM05D009501 ORTHO05D341879 6.2e-13 77.0 47 83.0
RcHm_v2.0_Chr2g0137521 Rosa chinensis HOM05D013162 ORTHO05D342650 3.5e-08 61.2 58 60.3
RcHm_v2.0_Chr2g0172821 Rosa chinensis HOM05D009501 ORTHO05D343224 3.3e-06 54.7 32 84.4


User provided reference genes

Program Settings