Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0129311 Rosa chinensis HOM05D004083 ORTHO05D005029 3.6e-131 471.9 285 100.0
RcHm_v2.0_Chr7g0200711 Rosa chinensis HOM05D004083 ORTHO05D005029 4.7e-123 444.9 284 95.8
FvH4_5g00881 Fragaria vesca HOM05D004083 ORTHO05D005029 8.4e-56 221.5 257 59.5
FAN18G2457 Fragaria x ananassa HOM05D004083 ORTHO05D005029 1.1e-55 221.1 258 59.3
FAN04G0828 Fragaria x ananassa HOM05D004083 ORTHO05D005029 2.1e-51 206.8 246 59.3
FAN12G2651 Fragaria x ananassa HOM05D004083 ORTHO05D005029 2.6e-41 173.3 234 54.3
FvH4_4g18280 Fragaria vesca HOM05D004083 ORTHO05D005029 4.5e-41 172.6 234 53.8
RcHm_v2.0_Chr7g0183051 Rosa chinensis HOM05D004083 ORTHO05D005029 8.5e-32 141.7 279 45.5
FAN13G1062 Fragaria x ananassa HOM05D004083 ORTHO05D005029 3.2e-31 139.8 153 62.7
FAN08G2807 Fragaria x ananassa HOM05D004083 ORTHO05D005029 3.1e-26 123.2 224 46.9
FAN13G2878 Fragaria x ananassa HOM05D004083 ORTHO05D005029 5.3e-26 122.5 221 48.4
FAN18G2285 Fragaria x ananassa HOM05D004083 ORTHO05D005029 1.5e-25 120.9 225 46.2
FvH4_5g13880 Fragaria vesca HOM05D004083 ORTHO05D005029 1.7e-24 117.5 223 46.2
FAN24G1955 Fragaria x ananassa HOM05D004083 ORTHO05D210451 2.8e-19 100.1 127 59.1
RcHm_v2.0_Chr7g0200511 Rosa chinensis HOM05D004083 ORTHO05D005029 2.6e-17 93.6 101 70.3
MD14G1211500 Malus domestica HOM05D004083 ORTHO05D005029 1.3e-11 74.7 202 46.0
MD06G1202400 Malus domestica HOM05D004083 ORTHO05D005029 8.3e-11 72.0 214 43.9
Prupe.5G204600 Prunus persica HOM05D004083 ORTHO05D005029 4.1e-10 69.7 322 36.3
RcHm_v2.0_Chr7g0183041 Rosa chinensis HOM05D004083 ORTHO05D005029 4.1e-10 69.7 187 45.5
PGSC0003DMG400024541 Solanum tuberosum HOM05D004083 ORTHO05D005029 1.9e-07 60.8 199 29.1
SHI27062 Sapria himalayana HOM05D004083 ORTHO05D005029 1.2e-06 58.2 279 34.4
Sopen03g034200 Solanum pennellii HOM05D004083 ORTHO05D005029 2.7e-06 57.0 220 30.9
FvH4_5g13920 Fragaria vesca HOM05D004083 ORTHO05D005029 6.1e-06 55.8 176 41.5
SMO203G0173 Selaginella moellendorffii HOM05D004083 ORTHO05D005029 8.0e-06 55.5 90 40.0


User provided reference genes

Program Settings