Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0127781 Rosa chinensis HOM05D000038 ORTHO05D009868 5.9e-36 153.7 78 100.0
MD09G1116700 Malus domestica HOM05D000038 ORTHO05D000689 7.3e-10 67.0 54 66.7
MD12G1033500 Malus domestica HOM05D000038 ORTHO05D000689 2.1e-09 65.5 54 64.8
Prupe.3G141400 Prunus persica HOM05D000038 ORTHO05D000689 2.8e-09 65.1 49 63.3
MD17G1108100 Malus domestica HOM05D000038 ORTHO05D009868 3.6e-09 64.7 55 61.8
RcHm_v2.0_Chr2g0127791 Rosa chinensis HOM05D000038 ORTHO05D000689 8.0e-09 63.5 51 64.7
FvH4_6g26450 Fragaria vesca HOM05D000038 ORTHO05D000689 1.2e-07 59.7 52 59.6
FAN02G1265 Fragaria x ananassa HOM05D000038 ORTHO05D009868 1.2e-07 59.7 52 59.6
FAN05G2608 Fragaria x ananassa HOM05D000038 ORTHO05D000689 1.2e-07 59.7 52 59.6
FAN14G2147 Fragaria x ananassa HOM05D000038 ORTHO05D000689 1.2e-07 59.7 52 59.6
Atru.chr6.2978 Acer truncatum HOM05D000013 ORTHO05D000689 1.5e-07 59.3 47 63.8
Atru.chr6.2979 Acer truncatum HOM05D000038 ORTHO05D000689 2.0e-07 58.9 40 72.5
FAN09G0671 Fragaria x ananassa HOM05D000038 ORTHO05D000689 3.4e-07 58.2 52 57.7
FAN09G2569 Fragaria x ananassa HOM05D000038 ORTHO05D000689 3.4e-07 58.2 52 57.7
FvH4_6g26420 Fragaria vesca HOM05D000038 ORTHO05D000689 9.8e-07 56.6 64 48.4
FAN02G1625 Fragaria x ananassa HOM05D000038 ORTHO05D000689 9.8e-07 56.6 64 48.4
MD14G1034800 Malus domestica HOM05D000038 ORTHO05D000689 9.8e-07 56.6 53 56.6
QL08p042153 Quercus lobata HOM05D000038 ORTHO05D009868 2.2e-06 55.5 38 68.4
FvH4_6g26451 Fragaria vesca HOM05D000038 ORTHO05D000689 3.7e-06 54.7 40 70.0
RcHm_v2.0_Chr2g0128001 Rosa chinensis HOM05D000013 ORTHO05D000689 4.9e-06 54.3 58 48.3


User provided reference genes

Program Settings