Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0125891 Rosa chinensis HOM05D009501 ORTHO05D342573 4.8e-34 147.1 68 100.0
RcHm_v2.0_Chr7g0188901 Rosa chinensis HOM05D009501 ORTHO05D348402 2.0e-27 125.2 68 88.2
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 3.7e-26 120.9 87 69.0
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 1.0e-23 112.8 54 96.3
RcHm_v2.0_Chr2g0172821 Rosa chinensis HOM05D009501 ORTHO05D343224 1.0e-23 112.8 54 96.3
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 1.0e-23 112.8 54 96.3
RcHm_v2.0_Chr3g0458801 Rosa chinensis HOM05D009501 ORTHO05D347237 1.0e-23 112.8 54 96.3
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 2.2e-23 111.7 54 96.3
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 3.8e-23 110.9 54 94.4
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 5.0e-23 110.5 54 94.4
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 8.5e-23 109.8 54 94.4
RcHm_v2.0_Chr2g0172141 Rosa chinensis HOM05D009501 ORTHO05D347212 5.7e-19 97.1 46 95.7
RcHm_v2.0_Chr2g0126821 Rosa chinensis HOM05D009501 ORTHO05D341325 1.7e-15 85.5 40 95.0
RcHm_v2.0_Chr2g0126831 Rosa chinensis HOM05D009501 ORTHO05D341994 1.7e-15 85.5 40 95.0
RcHm_v2.0_Chr2g0126591 Rosa chinensis HOM05D009501 ORTHO05D345083 8.5e-15 83.2 40 92.5
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 1.4e-09 65.9 60 58.3
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 9.1e-09 63.2 84 44.0
RcHm_v2.0_Chr2g0176641 Rosa chinensis HOM05D009501 ORTHO05D341879 3.8e-07 57.8 27 100.0
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 3.8e-07 57.8 27 100.0
RcHm_v2.0_Chr2g0122351 Rosa chinensis HOM05D009501 ORTHO05D341307 1.1e-06 56.2 39 74.4
RcHm_v2.0_Chr1g0374781 Rosa chinensis HOM05D009501 ORTHO05D341958 1.9e-06 55.5 27 96.3
RcHm_v2.0_Chr2g0123441 Rosa chinensis HOM05D009501 ORTHO05D345190 1.9e-06 55.5 27 96.3
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 1.9e-06 55.5 27 96.3
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 1.9e-06 55.5 27 96.3
RcHm_v2.0_Chr2g0152041 Rosa chinensis HOM05D009501 ORTHO05D346335 1.9e-06 55.5 27 96.3
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 1.9e-06 55.5 27 96.3
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 1.9e-06 55.5 27 96.3


User provided reference genes

Program Settings