Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 2.6e-55 218.4 105 100.0
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 1.1e-45 186.4 90 98.9
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 1.4e-43 179.5 85 98.8
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 2.2e-38 162.2 81 92.6
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 2.9e-38 161.8 75 100.0
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 2.7e-36 155.2 74 97.3
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 3.0e-35 151.8 74 95.9
RcHm_v2.0_Chr2g0172141 Rosa chinensis HOM05D009501 ORTHO05D347212 3.6e-28 128.3 61 100.0
RcHm_v2.0_Chr2g0172821 Rosa chinensis HOM05D009501 ORTHO05D343224 3.6e-28 128.3 59 100.0
RcHm_v2.0_Chr3g0458801 Rosa chinensis HOM05D009501 ORTHO05D347237 1.1e-26 123.2 58 96.6
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 1.3e-25 119.8 58 98.3
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 1.3e-25 119.8 58 98.3
RcHm_v2.0_Chr7g0188901 Rosa chinensis HOM05D009501 ORTHO05D348402 7.0e-24 114.0 68 83.8
RcHm_v2.0_Chr2g0125891 Rosa chinensis HOM05D009501 ORTHO05D342573 2.0e-23 112.5 54 96.3
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 6.5e-22 107.5 79 72.2
RcHm_v2.0_Chr2g0152041 Rosa chinensis HOM05D009501 ORTHO05D346335 4.2e-21 104.8 76 72.4
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 1.6e-20 102.8 54 88.9
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 1.0e-19 100.1 48 97.9
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 1.0e-19 100.1 47 100.0
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 1.0e-19 100.1 47 100.0
RcHm_v2.0_Chr2g0176641 Rosa chinensis HOM05D009501 ORTHO05D341879 2.3e-19 99.0 48 97.9
RcHm_v2.0_Chr2g0122351 Rosa chinensis HOM05D009501 ORTHO05D341307 1.2e-18 96.7 47 95.7
RcHm_v2.0_Chr2g0123441 Rosa chinensis HOM05D009501 ORTHO05D345190 1.2e-18 96.7 47 95.7
RcHm_v2.0_Chr1g0374781 Rosa chinensis HOM05D009501 ORTHO05D341958 2.0e-18 95.9 46 97.8
RcHm_v2.0_Chr2g0175061 Rosa chinensis HOM05D009501 ORTHO05D348800 3.7e-17 91.7 48 89.6
RcHm_v2.0_Chr2g0130441 Rosa chinensis HOM05D009501 ORTHO05D348382 5.4e-16 87.8 61 70.5
RcHm_v2.0_Chr2g0122021 Rosa chinensis HOM05D041001 ORTHO05D343432 2.3e-11 72.4 64 64.1
RcHm_v2.0_Chr2g0122331 Rosa chinensis HOM05D041001 ORTHO05D345226 2.0e-10 69.3 64 60.9
RcHm_v2.0_Chr2g0126821 Rosa chinensis HOM05D009501 ORTHO05D341325 2.0e-10 69.3 62 64.5
RcHm_v2.0_Chr2g0126831 Rosa chinensis HOM05D009501 ORTHO05D341994 2.0e-10 69.3 62 64.5
RcHm_v2.0_Chr2g0126851 Rosa chinensis HOM05D041001 ORTHO05D348891 4.4e-10 68.2 64 60.9
RcHm_v2.0_Chr2g0121111 Rosa chinensis HOM05D013162 ORTHO05D346914 7.0e-08 60.8 44 75.0
RcHm_v2.0_Chr3g0466611 Rosa chinensis HOM05D013162 ORTHO05D343811 1.6e-07 59.7 77 46.8
RcHm_v2.0_Chr2g0121621 Rosa chinensis HOM05D017629 ORTHO05D345494 4.5e-07 58.2 60 63.3
RcHm_v2.0_Chr2g0126591 Rosa chinensis HOM05D009501 ORTHO05D345083 5.0e-06 54.7 39 74.4


User provided reference genes

Program Settings