Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0124801 Rosa chinensis HOM05D051649 ORTHO05D008085 1.4e-24 115.5 61 100.0
RcHm_v2.0_Chr2g0133051 Rosa chinensis HOM05D051649 ORTHO05D008085 9.0e-24 112.8 61 98.4
RcHm_v2.0_Chr4g0387891 Rosa chinensis HOM05D001654 ORTHO05D008085 9.0e-16 86.3 60 81.7
RcHm_v2.0_Chr1g0346861 Rosa chinensis HOM05D001654 ORTHO05D008085 2.0e-15 85.1 60 80.0
RcHm_v2.0_Chr5g0059041 Rosa chinensis HOM05D001654 ORTHO05D008085 2.6e-15 84.7 60 81.7
RcHm_v2.0_Chr3g0487011 Rosa chinensis HOM05D001654 ORTHO05D008085 5.0e-14 80.5 64 73.4
Prupe.3G007000 Prunus persica HOM05D001654 ORTHO05D008085 8.8e-11 69.7 60 68.3
MD17G1279000 Malus domestica HOM05D001654 ORTHO05D008085 1.7e-09 65.5 58 67.2
Prupe.6G008100 Prunus persica HOM05D001654 ORTHO05D008085 4.1e-08 60.8 50 68.0
PGR083G0503 Punica granatum HOM05D001654 ORTHO05D008085 5.9e-07 57.0 55 61.8
CiPaw.07G120500 Carya illinoinensis HOM05D001654 ORTHO05D008085 1.0e-06 56.2 58 56.9
COL.COLO4_23188 Corchorus olitorius HOM05D001654 ORTHO05D008085 2.9e-06 54.7 50 60.0
GSVIVG01028158001 Vitis vinifera HOM05D001654 ORTHO05D008085 5.0e-06 53.9 54 57.4
Cfa001520 Carpinus fangiana HOM05D001654 ORTHO05D008085 8.5e-06 53.1 58 51.7
Thecc.01G318700 Theobroma cacao HOM05D001654 ORTHO05D008085 8.5e-06 53.1 54 53.7


User provided reference genes

Program Settings