Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0123171 Rosa chinensis HOM05D008049 ORTHO05D010198 7.9e-133 477.2 266 100.0
FAN26G0656 Fragaria x ananassa HOM05D008049 ORTHO05D010198 2.0e-96 356.3 269 71.4
FAN26G2415 Fragaria x ananassa HOM05D008049 ORTHO05D010198 2.0e-96 356.3 269 71.4
FvH4_1g25250 Fragaria vesca HOM05D008049 ORTHO05D010198 5.9e-96 354.8 269 71.7
FAN19G2909 Fragaria x ananassa HOM05D008049 ORTHO05D010198 6.2e-93 344.7 267 70.8
MD15G1137300 Malus domestica HOM05D008049 ORTHO05D010198 8.3e-90 334.3 297 66.7
Prupe.4G279900 Prunus persica HOM05D008049 ORTHO05D010198 1.7e-82 310.1 312 62.8
Ciclev10002216m.g Citrus clementina HOM05D008049 ORTHO05D010198 3.2e-81 305.8 269 66.9
CiPaw.03G116500 Carya illinoinensis HOM05D008049 ORTHO05D010198 2.1e-72 276.6 315 59.0
Atru.chr4.1095 Acer truncatum HOM05D008049 ORTHO05D010198 6.6e-71 271.6 283 58.0
Atru.chr4.1100 Acer truncatum HOM05D008049 ORTHO05D010198 6.6e-71 271.6 283 58.0
QL10p040433 Quercus lobata HOM05D008049 ORTHO05D010198 6.6e-71 271.6 322 56.5
Cpa.g.sc37.30 Carica papaya HOM05D008049 ORTHO05D010198 1.5e-70 270.4 310 53.5
Potri.005G069900 Populus trichocarpa HOM05D008049 ORTHO05D010198 9.6e-70 267.7 312 55.4
THA.LOC104818414 Tarenaya hassleriana HOM05D008049 ORTHO05D010198 6.2e-69 265.0 309 55.0
TAR381G0470 Trochodendron aralioides HOM05D008049 ORTHO05D010198 3.1e-68 262.7 320 54.1
PSO528G0188 Papaver somniferum HOM05D008049 ORTHO05D010198 2.6e-67 259.6 279 56.6
AL6G19520 Arabidopsis lyrata HOM05D008049 ORTHO05D010198 3.8e-66 255.8 305 52.5
Dinv30334 Davidia involucrata HOM05D008049 ORTHO05D010198 6.4e-66 255.0 329 51.4
PGR102G0265 Punica granatum HOM05D008049 ORTHO05D010198 8.4e-66 254.6 286 59.4
TWI31G1063 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 1.2e-64 250.8 298 54.0
Carub.0006s0774 Capsella rubella HOM05D008049 ORTHO05D010198 2.1e-64 250.0 312 50.3
CARHR204240 Cardamine hirsuta HOM05D008049 ORTHO05D010198 2.7e-64 249.6 243 59.3
AT5G08770 Arabidopsis thaliana HOM05D008049 ORTHO05D010198 3.5e-64 249.2 305 50.2
Aa31LG3G17800 Aethionema arabicum HOM05D008049 ORTHO05D010198 6.0e-64 248.4 248 57.3
Thhalv10014201m.g Eutrema salsugineum HOM05D008049 ORTHO05D010198 1.0e-63 247.7 248 56.0
TWI79G0517 Tripterygium wilfordii HOM05D008049 ORTHO05D010198 1.0e-63 247.7 291 53.6
Hma1.2p1_0134F.1_g061550 Hydrangea macrophylla HOM05D008049 ORTHO05D010198 4.3e-62 242.3 319 53.3
Sp6g34110 Schrenkiella parvula HOM05D008049 ORTHO05D010198 4.3e-62 242.3 314 48.4
Medtr3g096940 Medicago truncatula HOM05D008049 ORTHO05D010198 7.3e-62 241.5 295 51.5
PSO170G0957 Papaver somniferum HOM05D008049 ORTHO05D010198 1.3e-61 240.7 278 57.9
arahy.Tifrunner.gnm1.ann1.WZNZ1Z Arachis hypogaea HOM05D008049 ORTHO05D010198 1.1e-60 237.7 321 50.2
A10p28010 Brassica napus HOM05D008049 ORTHO05D010198 3.1e-60 236.1 302 50.0
BolC9t59570H Brassica oleracea HOM05D008049 ORTHO05D010198 9.0e-60 234.6 307 49.2
C09p68210 Brassica napus HOM05D008049 ORTHO05D010198 1.2e-59 234.2 307 49.2
arahy.Tifrunner.gnm1.ann1.M4SWJY Arachis hypogaea HOM05D008049 ORTHO05D010198 1.5e-59 233.8 319 49.5
BraA10t44851Z Brassica rapa HOM05D008049 ORTHO05D010198 2.0e-59 233.4 302 49.3
Glyma.04G208100 Glycine max HOM05D008049 ORTHO05D010198 2.0e-59 233.4 301 51.8
Glyma.06G157600 Glycine max HOM05D008049 ORTHO05D010198 2.6e-59 233.0 297 51.9
Lj1g0009929 Lotus japonicus HOM05D008049 ORTHO05D010198 3.8e-58 229.2 319 47.3
Phvul.009G152600 Phaseolus vulgaris HOM05D008049 ORTHO05D010198 3.8e-58 229.2 307 50.8
Actinidia16520 Actinidia chinensis HOM05D008049 ORTHO05D010198 4.9e-58 228.8 329 48.6
BcaB08g37227 Brassica carinata HOM05D008049 ORTHO05D010198 8.4e-58 228.0 324 44.4
DCAR_013179 Daucus carota HOM05D008049 ORTHO05D010198 3.2e-57 226.1 291 49.5
Thecc.01G140900 Theobroma cacao HOM05D008049 ORTHO05D010198 4.6e-56 222.2 241 56.0
Duzib187G0110 Durio zibethinus HOM05D008049 ORTHO05D010198 1.6e-53 213.8 239 52.7
Duzib147G0405 Durio zibethinus HOM05D008049 ORTHO05D010198 1.1e-52 211.1 241 55.6
Gorai.012G037400 Gossypium raimondii HOM05D008049 ORTHO05D010198 6.9e-52 208.4 241 55.2
Nn5g28352 Nelumbo nucifera HOM05D008049 ORTHO05D010198 9.0e-52 208.0 306 47.1
VMungo1309G0538 Vigna mungo HOM05D008049 ORTHO05D010198 2.2e-50 203.4 301 46.2
Sc09g0002140 Simmondsia chinensis HOM05D008049 ORTHO05D010198 6.4e-50 201.8 265 50.6
Lalb_Chr08g0238031 Lupinus albus HOM05D008049 ORTHO05D010198 7.9e-48 194.9 234 54.7
Migut.H00830 Erythranthe guttata HOM05D008049 ORTHO05D010198 6.2e-45 185.3 302 46.0
MD15G1137000 Malus domestica HOM05D008049 ORTHO05D010198 1.8e-44 183.7 149 67.8
COL.COLO4_12107 Corchorus olitorius HOM05D008049 ORTHO05D010198 4.2e-41 172.6 160 57.5
EL10Ac4g09675 Beta vulgaris HOM05D008049 ORTHO05D010198 3.9e-39 166.0 263 44.1
unitig_899.g15147 Utricularia gibba HOM05D008049 ORTHO05D010198 4.3e-38 162.5 209 48.3
Gohir.A05G382200 Gossypium hirsutum HOM05D008049 ORTHO05D010198 1.9e-33 147.1 241 39.8
AUR62006889 Chenopodium quinoa HOM05D008049 ORTHO05D010198 1.2e-32 144.4 174 54.0
Sabra05G0056900 Salix brachista HOM05D008049 ORTHO05D010198 2.1e-32 143.7 113 67.3
Gohir.D04G033000 Gossypium hirsutum HOM05D008049 ORTHO05D010198 1.8e-31 140.6 179 47.5
CDE04G3132 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 7.2e-25 118.6 280 33.6
Psat5g058560 Pisum sativum HOM05D008049 ORTHO05D010198 3.3e-22 109.8 90 67.8
Nitab4.5_0000905g0120 Nicotiana tabacum HOM05D008049 ORTHO05D010198 4.4e-22 109.4 167 43.1
CDE07G0304 Ceratophyllum demersum HOM05D008049 ORTHO05D010198 9.7e-22 108.2 272 33.8
TPR.G7867 Trifolium pratense HOM05D008049 ORTHO05D010198 1.3e-21 107.8 170 47.1
AUR62000540 Chenopodium quinoa HOM05D008049 ORTHO05D010198 3.1e-20 103.2 90 67.8
MBI06_g26010_MAGBIO Magnolia biondii HOM05D008049 ORTHO05D010198 2.0e-19 100.5 169 40.8
SGA_v2.0_scaffold20G08957 Striga asiatica HOM05D008049 ORTHO05D010198 3.0e-15 86.7 144 39.6
Ca_16998_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 9.1e-12 75.1 54 75.9
Ca_17026_v3 Cicer arietinum L. HOM05D008049 ORTHO05D010198 9.1e-12 75.1 54 75.9
arahy.Tifrunner.gnm1.ann1.P087XE Arachis hypogaea HOM05D008049 ORTHO05D010198 5.2e-07 59.3 37 81.1
Peaxi162Scf00925g00015 Petunia axillaris HOM05D008049 ORTHO05D010198 2.0e-06 57.4 82 39.0


User provided reference genes

Program Settings