Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0122351 Rosa chinensis HOM05D009501 ORTHO05D341307 1.5e-21 105.1 50 100.0
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 1.7e-20 101.7 50 96.0
RcHm_v2.0_Chr1g0374781 Rosa chinensis HOM05D009501 ORTHO05D341958 2.2e-20 101.3 50 96.0
RcHm_v2.0_Chr2g0123441 Rosa chinensis HOM05D009501 ORTHO05D345190 5.0e-20 100.1 48 95.8
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 8.5e-20 99.4 50 96.0
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 8.5e-20 99.4 50 96.0
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 1.1e-19 99.0 48 95.8
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 3.2e-19 97.4 47 97.9
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 3.2e-19 97.4 47 97.9
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 3.2e-19 97.4 47 97.9
RcHm_v2.0_Chr2g0152041 Rosa chinensis HOM05D009501 ORTHO05D346335 3.2e-19 97.4 47 97.9
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 3.2e-19 97.4 47 97.9
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 3.2e-19 97.4 47 97.9
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 4.2e-19 97.1 50 94.0
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 5.5e-19 96.7 48 93.8
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 7.2e-19 96.3 50 92.0
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 1.6e-18 95.1 47 95.7
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 6.1e-18 93.2 47 93.6
RcHm_v2.0_Chr2g0176641 Rosa chinensis HOM05D009501 ORTHO05D341879 1.8e-17 91.7 47 93.6
RcHm_v2.0_Chr2g0175061 Rosa chinensis HOM05D009501 ORTHO05D348800 3.0e-17 90.9 50 88.0
RcHm_v2.0_Chr2g0130441 Rosa chinensis HOM05D009501 ORTHO05D348382 3.7e-15 84.0 47 85.1
RcHm_v2.0_Chr2g0172821 Rosa chinensis HOM05D009501 ORTHO05D343224 2.3e-09 64.7 32 93.8
RcHm_v2.0_Chr3g0458801 Rosa chinensis HOM05D009501 ORTHO05D347237 3.3e-08 60.8 31 90.3
RcHm_v2.0_Chr2g0125891 Rosa chinensis HOM05D009501 ORTHO05D342573 3.1e-06 54.3 27 96.3
RcHm_v2.0_Chr2g0126821 Rosa chinensis HOM05D009501 ORTHO05D341325 4.1e-06 53.9 48 64.6
RcHm_v2.0_Chr2g0126831 Rosa chinensis HOM05D009501 ORTHO05D341994 4.1e-06 53.9 48 64.6
RcHm_v2.0_Chr2g0126591 Rosa chinensis HOM05D009501 ORTHO05D345083 9.1e-06 52.8 39 74.4


User provided reference genes

Program Settings