Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0121621 Rosa chinensis HOM05D017629 ORTHO05D345494 2.8e-28 127.9 63 100.0
RcHm_v2.0_Chr2g0121111 Rosa chinensis HOM05D013162 ORTHO05D346914 1.3e-17 92.4 62 79.0
RcHm_v2.0_Chr1g0368381 Rosa chinensis HOM05D017629 ORTHO05D344411 2.9e-17 91.3 54 88.9
RcHm_v2.0_Chr2g0123551 Rosa chinensis HOM05D017629 ORTHO05D341354 2.9e-17 91.3 54 88.9
RcHm_v2.0_Chr3g0457211 Rosa chinensis HOM05D017629 ORTHO05D344719 2.5e-16 88.2 54 85.2
RcHm_v2.0_Chr3g0468521 Rosa chinensis HOM05D017629 ORTHO05D346058 2.5e-16 88.2 43 100.0
RcHm_v2.0_Chr3g0456391 Rosa chinensis HOM05D017629 ORTHO05D346108 4.2e-16 87.4 54 85.2
RcHm_v2.0_Chr2g0170421 Rosa chinensis HOM05D017629 ORTHO05D342628 2.1e-15 85.1 54 87.0
RcHm_v2.0_Chr2g0125961 Rosa chinensis HOM05D013162 ORTHO05D347589 5.3e-11 70.5 56 69.6
RcHm_v2.0_Chr2g0129551 Rosa chinensis HOM05D013162 ORTHO05D345436 5.3e-11 70.5 56 69.6
RcHm_v2.0_Chr3g0449711 Rosa chinensis HOM05D013162 ORTHO05D348619 5.3e-11 70.5 56 69.6
RcHm_v2.0_Chr2g0145951 Rosa chinensis HOM05D013162 ORTHO05D347407 1.2e-10 69.3 56 67.9
RcHm_v2.0_Chr1g0378991 Rosa chinensis HOM05D013162 ORTHO05D345455 2.6e-10 68.2 55 69.1
RcHm_v2.0_Chr3g0466611 Rosa chinensis HOM05D013162 ORTHO05D343811 4.5e-10 67.4 56 67.9
RcHm_v2.0_Chr1g0379421 Rosa chinensis HOM05D013162 ORTHO05D340967 1.3e-09 65.9 54 68.5
RcHm_v2.0_Chr2g0127801 Rosa chinensis HOM05D013162 ORTHO05D345360 2.2e-09 65.1 40 85.0
RcHm_v2.0_Chr3g0456411 Rosa chinensis HOM05D009501 ORTHO05D343829 5.5e-08 60.5 62 64.5
RcHm_v2.0_Chr2g0121401 Rosa chinensis HOM05D009501 ORTHO05D348033 2.7e-07 58.2 62 62.9
RcHm_v2.0_Chr2g0125531 Rosa chinensis HOM05D009501 ORTHO05D346198 2.7e-07 58.2 60 63.3
RcHm_v2.0_Chr2g0121091 Rosa chinensis HOM05D009501 ORTHO05D342605 3.6e-07 57.8 60 63.3
RcHm_v2.0_Chr1g0371951 Rosa chinensis HOM05D009501 ORTHO05D344225 1.0e-06 56.2 59 62.7
RcHm_v2.0_Chr2g0129841 Rosa chinensis HOM05D009501 ORTHO05D340868 1.4e-06 55.8 46 69.6
RcHm_v2.0_Chr2g0146221 Rosa chinensis HOM05D009501 ORTHO05D346517 1.4e-06 55.8 62 61.3
RcHm_v2.0_Chr2g0148011 Rosa chinensis HOM05D009501 ORTHO05D342583 1.4e-06 55.8 60 61.7
RcHm_v2.0_Chr2g0175061 Rosa chinensis HOM05D009501 ORTHO05D348800 1.4e-06 55.8 46 69.6
RcHm_v2.0_Chr3g0458341 Rosa chinensis HOM05D009501 ORTHO05D345011 3.0e-06 54.7 46 69.6
RcHm_v2.0_Chr7g0193441 Rosa chinensis HOM05D009501 ORTHO05D342899 5.1e-06 53.9 43 69.8
RcHm_v2.0_Chr2g0133011 Rosa chinensis HOM05D009501 ORTHO05D341341 6.7e-06 53.5 44 68.2
RcHm_v2.0_Chr2g0134721 Rosa chinensis HOM05D009501 ORTHO05D345538 6.7e-06 53.5 44 68.2
RcHm_v2.0_Chr2g0161861 Rosa chinensis HOM05D009501 ORTHO05D341995 6.7e-06 53.5 44 68.2
RcHm_v2.0_Chr7g0181631 Rosa chinensis HOM05D009501 ORTHO05D342634 6.7e-06 53.5 44 68.2


User provided reference genes

Program Settings