Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0120841 Rosa chinensis HOM05D007437 ORTHO05D009422 1.4e-87 326.2 165 100.0
FAN23G1428 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-80 303.1 165 93.9
FAN23G2875 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.3e-80 303.1 165 93.9
FvH4_1g24330 Fragaria vesca HOM05D007437 ORTHO05D009422 1.1e-79 300.1 165 93.3
FAN26G0277 Fragaria x ananassa HOM05D007437 ORTHO05D009422 1.4e-79 299.7 165 93.3
FAN19G0121 Fragaria x ananassa HOM05D007437 ORTHO05D009422 4.1e-79 298.1 165 92.7
Prupe.6G157800 Prunus persica HOM05D007437 ORTHO05D009422 2.4e-63 245.7 160 80.0
PGR119G2133 Punica granatum HOM05D007437 ORTHO05D009422 3.5e-62 241.9 168 75.6
TWI31G0094 Tripterygium wilfordii HOM05D007437 ORTHO05D009422 1.6e-59 233.0 164 72.0
GSVIVG01026485001 Vitis vinifera HOM05D007437 ORTHO05D009422 2.1e-59 232.6 166 75.9
QL10p043643 Quercus lobata HOM05D007437 ORTHO05D009422 6.2e-59 231.1 164 73.8
CiPaw.04G082500 Carya illinoinensis HOM05D007437 ORTHO05D009422 5.2e-58 228.0 166 77.1
Dinv24359 Davidia involucrata HOM05D007437 ORTHO05D009422 2.6e-57 225.7 165 74.5
Potri.007G106500 Populus trichocarpa HOM05D007437 ORTHO05D009422 3.4e-57 225.3 163 75.5
TAR628G0551 Trochodendron aralioides HOM05D007437 ORTHO05D009422 7.5e-57 224.2 165 73.3
ClCG01G015390 Citrullus lanatus HOM05D007437 ORTHO05D009422 1.7e-56 223.0 162 74.1
Nn5g28551 Nelumbo nucifera HOM05D007437 ORTHO05D009422 1.1e-55 220.3 165 71.5
COL.COLO4_35739 Corchorus olitorius HOM05D007437 ORTHO05D009422 3.2e-55 218.8 167 72.5
Glyma.06G153400 Glycine max HOM05D007437 ORTHO05D009422 4.1e-55 218.4 167 72.5
Sed0017320 Sechium edule HOM05D007437 ORTHO05D009422 4.1e-55 218.4 165 70.3
Oeu033664.1 Olea europaea HOM05D007437 ORTHO05D009422 5.4e-55 218.0 166 71.1
Ciclev10002727m.g Citrus clementina HOM05D007437 ORTHO05D009422 3.5e-54 215.3 165 69.1
Eucgr.I00205 Eucalyptus grandis HOM05D007437 ORTHO05D009422 4.6e-54 214.9 175 68.6
Manes.13G087100 Manihot esculenta HOM05D007437 ORTHO05D009422 6.0e-54 214.5 167 72.5
MELO3C008059.2 Cucumis melo HOM05D007437 ORTHO05D009422 1.0e-53 213.8 155 73.5
Thecc.01G131700 Theobroma cacao HOM05D007437 ORTHO05D009422 1.0e-53 213.8 163 73.0
VMungo1309G0428 Vigna mungo HOM05D007437 ORTHO05D009422 1.0e-53 213.8 165 69.1
QL05p004660 Quercus lobata HOM05D007437 ORTHO05D009422 1.7e-53 213.0 155 72.9
Duzib264G1294 Durio zibethinus HOM05D007437 ORTHO05D009422 3.9e-53 211.8 168 69.6
THA.LOC104813856 Tarenaya hassleriana HOM05D007437 ORTHO05D009422 3.9e-53 211.8 167 70.1
Haze_25232 Corylus avellana HOM05D007437 ORTHO05D009422 8.6e-53 210.7 157 75.2
Duzib147G0634 Durio zibethinus HOM05D007437 ORTHO05D009422 1.1e-52 210.3 175 69.7
Gohir.D10G109201 Gossypium hirsutum HOM05D007437 ORTHO05D009422 1.5e-52 209.9 166 68.1
CANSAT01G2130 Cannabis sativa HOM05D007437 ORTHO05D009422 2.5e-52 209.1 165 69.7
Lalb_Chr11g0068441 Lupinus albus HOM05D007437 ORTHO05D009422 2.5e-52 209.1 165 69.1
Phvul.009G150600 Phaseolus vulgaris HOM05D007437 ORTHO05D009422 5.6e-52 208.0 165 67.3
Gorai.011G119800 Gossypium raimondii HOM05D007437 ORTHO05D009422 9.5e-52 207.2 166 67.5
Aqoxy5G02234 Aquilegia oxysepala HOM05D007437 ORTHO05D009422 1.2e-51 206.8 166 67.5
MBI03_g35294_MAGBIO Magnolia biondii HOM05D007437 ORTHO05D009422 1.2e-51 206.8 165 66.7
Migut.L00964 Erythranthe guttata HOM05D007437 ORTHO05D009422 2.8e-51 205.7 171 66.1
MSTRG.23461 Avicennia marina HOM05D007437 ORTHO05D009422 4.7e-51 204.9 170 65.3
Lj1g0016732 Lotus japonicus HOM05D007437 ORTHO05D009422 2.3e-50 202.6 165 67.3
Actinidia20077 Actinidia chinensis HOM05D007437 ORTHO05D009422 1.2e-49 200.3 161 71.4
CsaV3_6G041610 Cucumis sativus L. HOM05D007437 ORTHO05D009422 1.5e-49 199.9 165 66.7
AUR62017875 Chenopodium quinoa HOM05D007437 ORTHO05D009422 2.0e-49 199.5 167 66.5
AUR62003561 Chenopodium quinoa HOM05D007437 ORTHO05D009422 2.6e-49 199.1 167 66.5
AL2G34760 Arabidopsis lyrata HOM05D007437 ORTHO05D009422 1.3e-48 196.8 167 67.1
Cc07_g18480 Coffea canephora HOM05D007437 ORTHO05D009422 1.3e-48 196.8 166 65.1
Carub.0002s2167 Capsella rubella HOM05D007437 ORTHO05D009422 3.7e-48 195.3 167 65.9
HanXRQChr14g0433361 Helianthus annuus HOM05D007437 ORTHO05D009422 4.9e-48 194.9 121 79.3
Nitab4.5_0000856g0100 Nicotiana tabacum HOM05D007437 ORTHO05D009422 4.9e-48 194.9 168 63.1
AT1G74880 Arabidopsis thaliana HOM05D007437 ORTHO05D009422 1.1e-47 193.7 167 65.9
Psat5g062800 Pisum sativum HOM05D007437 ORTHO05D009422 1.1e-47 193.7 159 67.3
BolC6t39926H Brassica oleracea HOM05D007437 ORTHO05D009422 1.4e-47 193.4 167 66.5
CARHR068200 Cardamine hirsuta HOM05D007437 ORTHO05D009422 1.4e-47 193.4 162 68.5
Ca_16946_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 2.4e-47 192.6 166 64.5
Ca_16965_v3 Cicer arietinum L. HOM05D007437 ORTHO05D009422 2.4e-47 192.6 166 64.5
Atru.chr4.895 Acer truncatum HOM05D007437 ORTHO05D009422 4.1e-47 191.8 174 63.8
ECA238G2185 Erigeron canadensis HOM05D007437 ORTHO05D009422 4.1e-47 191.8 97 91.8
Gohir.A10G156422 Gossypium hirsutum HOM05D007437 ORTHO05D009422 7.1e-47 191.0 168 61.9
Nitab4.5_0008132g0030 Nicotiana tabacum HOM05D007437 ORTHO05D009422 7.1e-47 191.0 121 76.0
ATR1136G110 Amborella trichopoda HOM05D007437 ORTHO05D009422 9.2e-47 190.7 162 64.8
A07p40510 Brassica napus HOM05D007437 ORTHO05D009422 2.1e-46 189.5 167 65.3
Lsat_1_v5_gn_2_37340 Lactuca sativa HOM05D007437 ORTHO05D009422 2.7e-46 189.1 94 91.5
unitig_699.g19721 Utricularia gibba HOM05D007437 ORTHO05D009422 2.7e-46 189.1 159 62.9
Aa31LG4G5100 Aethionema arabicum HOM05D007437 ORTHO05D009422 6.0e-46 188.0 92 92.4
Medtr3g096290 Medicago truncatula HOM05D007437 ORTHO05D009422 7.8e-46 187.6 158 65.8
SalBow6G6692 Salvia bowleyana HOM05D007437 ORTHO05D009422 7.8e-46 187.6 159 65.4
Solyc11g006020.2 Solanum lycopersicum HOM05D007437 ORTHO05D009422 3.9e-45 185.3 167 60.5
PSO017G4908 Papaver somniferum HOM05D007437 ORTHO05D009422 5.1e-45 184.9 176 61.9
CAN.G582.8 Capsicum annuum HOM05D007437 ORTHO05D009422 8.6e-45 184.1 92 90.2
C06p48900 Brassica napus HOM05D007437 ORTHO05D009422 1.1e-44 183.7 104 82.7
Hma1.2p1_0050F.1_g029150 Hydrangea macrophylla HOM05D007437 ORTHO05D009422 1.9e-44 183.0 173 60.7
Thhalv10019178m.g Eutrema salsugineum HOM05D007437 ORTHO05D009422 2.5e-44 182.6 167 63.5
CSS0043391 Camellia sinensis var. sinensis HOM05D007437 ORTHO05D009422 9.5e-44 180.6 179 59.2
MD01G1003600 Malus domestica HOM05D007437 ORTHO05D009422 9.5e-44 180.6 150 64.0
SEGI_02322 Sequoiadendron giganteum HOM05D007437 ORTHO05D009422 4.7e-43 178.3 111 78.4
PSO170G6470 Papaver somniferum HOM05D007437 ORTHO05D009422 1.4e-42 176.8 178 59.0
Rhsim10G0134900 Rhododendron simsii HOM05D007437 ORTHO05D009422 1.4e-42 176.8 170 60.0
BraA07t31596Z Brassica rapa HOM05D007437 ORTHO05D009422 2.3e-42 176.0 161 62.7
Cpa.g.sc42.157 Carica papaya HOM05D007437 ORTHO05D009422 2.3e-42 176.0 181 56.9
arahy.Tifrunner.gnm1.ann1.1RKJ3P Arachis hypogaea HOM05D007437 ORTHO05D009422 6.8e-42 174.5 159 62.9
Migut.L00881 Erythranthe guttata HOM05D007437 ORTHO05D009422 8.9e-42 174.1 86 91.9
DCAR_014338 Daucus carota HOM05D007437 ORTHO05D009422 9.9e-41 170.6 156 61.5
Sopen11g001960 Solanum pennellii HOM05D007437 ORTHO05D009422 9.9e-41 170.6 189 52.9
AagrBONN_evm.TU.Sc2ySwM_344.3842 Anthoceros agrestis HOM05D007437 ORTHO05D009422 1.3e-40 170.2 115 72.2
TPR.G28241 Trifolium pratense HOM05D007437 ORTHO05D009422 4.9e-40 168.3 83 95.2
Os01g0959900 Oryza sativa ssp. japonica HOM05D007437 ORTHO05D009422 1.9e-39 166.4 86 87.2
Zm00001eb362560 Zea mays HOM05D007437 ORTHO05D009422 1.7e-37 159.8 81 90.1
Peaxi162Scf00183g00218 Petunia axillaris HOM05D007437 ORTHO05D009422 5.1e-37 158.3 173 53.8
EL10Ac6g15309 Beta vulgaris HOM05D007437 ORTHO05D009422 2.5e-36 156.0 166 56.6
vmacro12802 Vaccinium macrocarpon HOM05D007437 ORTHO05D009422 7.3e-36 154.5 82 87.8
SMO367G0120 Selaginella moellendorffii HOM05D000331 ORTHO05D002018 1.2e-35 153.7 80 86.2
SMO367G1275 Selaginella moellendorffii HOM05D007437 ORTHO05D009422 4.0e-34 148.7 75 88.0
Mapoly0090s0072 Marchantia polymorpha HOM05D007437 ORTHO05D009422 5.2e-34 148.3 87 74.7
CDE08G0468 Ceratophyllum demersum HOM05D005037 ORTHO05D006274 4.4e-33 145.2 77 84.4
Pp3c1_14760 Physcomitrium patens HOM05D007437 ORTHO05D009422 8.4e-32 141.0 150 53.3
Sp5g30020 Schrenkiella parvula HOM05D007437 ORTHO05D009422 9.3e-31 137.5 111 63.1
BcaC08g46922 Brassica carinata HOM05D007437 ORTHO05D009422 3.5e-30 135.6 142 59.2
QL05p004576 Quercus lobata HOM05D007437 ORTHO05D009422 4.6e-30 135.2 68 86.8
CBR_g29941 Chara braunii HOM05D007437 ORTHO05D009422 2.3e-29 132.9 94 67.0
CDE02G1359 Ceratophyllum demersum HOM05D007437 ORTHO05D009422 5.4e-23 111.7 91 65.9
arahy.Tifrunner.gnm1.ann1.E1UNHC Arachis hypogaea HOM05D007437 ORTHO05D009422 4.3e-20 102.1 124 54.0
Actinidia06621 Actinidia chinensis HOM05D007437 ORTHO05D009422 4.6e-06 55.5 94 50.0


User provided reference genes

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