Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0117421 Rosa chinensis HOM05D003657 ORTHO05D347029 9.0e-41 169.9 88 100.0
RcHm_v2.0_Chr4g0399271 Rosa chinensis HOM05D003657 ORTHO05D004286 7.4e-11 70.5 40 92.5
FAN21G3798 Fragaria x ananassa HOM05D003657 ORTHO05D004286 1.7e-10 69.3 60 70.0
RcHm_v2.0_Chr5g0068951 Rosa chinensis HOM05D003657 ORTHO05D004286 1.7e-10 69.3 65 64.6
FvH4_3g38340 Fragaria vesca HOM05D003657 ORTHO05D004286 2.2e-10 68.9 40 90.0
FAN11G3726 Fragaria x ananassa HOM05D003657 ORTHO05D004286 2.2e-10 68.9 40 90.0
FAN16G1802 Fragaria x ananassa HOM05D003657 ORTHO05D004286 2.2e-10 68.9 40 90.0
FAN25G3712 Fragaria x ananassa HOM05D003657 ORTHO05D004286 2.2e-10 68.9 40 90.0
RcHm_v2.0_Chr2g0157131 Rosa chinensis HOM05D003657 ORTHO05D004286 2.8e-10 68.6 40 90.0
Haze_24275 Corylus avellana HOM05D003657 ORTHO05D004286 2.2e-07 58.9 40 72.5
Cfa011669 Carpinus fangiana HOM05D003657 ORTHO05D004286 2.9e-07 58.5 40 72.5
Thecc.09G304100 Theobroma cacao HOM05D003657 ORTHO05D004286 2.9e-07 58.5 60 58.3
Duzib170G0663 Durio zibethinus HOM05D003657 ORTHO05D004286 3.8e-07 58.2 40 70.0
CiPaw.14G060100 Carya illinoinensis HOM05D003657 ORTHO05D004286 6.5e-07 57.4 40 70.0
Hund04875 Selenicereus undatus HOM05D003657 ORTHO05D004286 8.5e-07 57.0 60 50.0
vmacro02979 Vaccinium macrocarpon HOM05D003657 ORTHO05D004286 8.5e-07 57.0 40 72.5
CiPaw.13G079800 Carya illinoinensis HOM05D003657 ORTHO05D004286 1.1e-06 56.6 40 72.5
AUR62001671 Chenopodium quinoa HOM05D003657 ORTHO05D004286 1.1e-06 56.6 60 55.0
Lalb_Chr04g0252271 Lupinus albus HOM05D003657 ORTHO05D004286 1.1e-06 56.6 40 67.5
CSS0017673 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 1.9e-06 55.8 40 70.0
CSS0030381 Camellia sinensis var. sinensis HOM05D003657 ORTHO05D004286 1.9e-06 55.8 40 70.0
Prupe.6G059500 Prunus persica HOM05D003657 ORTHO05D004286 2.5e-06 55.5 36 75.0
Duzib168G2233 Durio zibethinus HOM05D003657 ORTHO05D004286 3.2e-06 55.1 40 70.0
PGR102G3249 Punica granatum HOM05D003657 ORTHO05D004286 3.2e-06 55.1 40 67.5
CANSAT54G0812 Cannabis sativa HOM05D003657 ORTHO05D004286 4.2e-06 54.7 39 71.8
Dinv28627 Davidia involucrata HOM05D003657 ORTHO05D004286 5.5e-06 54.3 40 70.0
Gohir.A03G050300 Gossypium hirsutum HOM05D003657 ORTHO05D004286 5.5e-06 54.3 40 65.0
arahy.Tifrunner.gnm1.ann1.NA7AU5 Arachis hypogaea HOM05D003657 ORTHO05D004286 7.2e-06 53.9 40 67.5
arahy.Tifrunner.gnm1.ann1.XTS0HX Arachis hypogaea HOM05D003657 ORTHO05D004286 7.2e-06 53.9 40 67.5
Hma1.2p1_3301F.1_g335025 Hydrangea macrophylla HOM05D003657 ORTHO05D004286 7.2e-06 53.9 40 65.0
EL10Ac7g16143 Beta vulgaris HOM05D003657 ORTHO05D004286 9.4e-06 53.5 60 51.7
Gohir.D03G117100 Gossypium hirsutum HOM05D003657 ORTHO05D004286 9.4e-06 53.5 40 62.5
Gorai.003G123500 Gossypium raimondii HOM05D003657 ORTHO05D004286 9.4e-06 53.5 40 62.5
Hma1.2p1_0227F.1_g096420 Hydrangea macrophylla HOM05D003657 ORTHO05D004286 9.4e-06 53.5 40 60.0


User provided reference genes

Program Settings