Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0116361 Rosa chinensis HOM05D006985 ORTHO05D008749 1.8e-102 375.9 196 100.0
FAN23G1894 Fragaria x ananassa HOM05D006985 ORTHO05D008749 1.0e-92 343.6 199 91.5
FvH4_1g22220 Fragaria vesca HOM05D006985 ORTHO05D008749 2.3e-92 342.4 199 91.5
MD15G1333400 Malus domestica HOM05D006985 ORTHO05D008749 1.2e-61 240.4 188 72.9
Prupe.6G173300 Prunus persica HOM05D006985 ORTHO05D008749 2.3e-60 236.1 201 66.7
Cfa002750 Carpinus fangiana HOM05D006985 ORTHO05D008749 3.6e-58 228.8 201 60.7
TAR625G1052 Trochodendron aralioides HOM05D006985 ORTHO05D008749 6.2e-58 228.0 203 65.5
CANSAT01G0007 Cannabis sativa HOM05D006985 ORTHO05D008749 3.1e-57 225.7 205 64.4
TWI53G2009 Tripterygium wilfordii HOM05D006985 ORTHO05D008749 3.1e-57 225.7 203 61.6
CiPaw.04G092100 Carya illinoinensis HOM05D006985 ORTHO05D008749 4.0e-57 225.3 200 61.5
Thecc.01G112400 Theobroma cacao HOM05D006985 ORTHO05D008749 2.6e-56 222.6 197 62.9
arahy.Tifrunner.gnm1.ann1.7DG6XK Arachis hypogaea HOM05D006985 ORTHO05D008749 9.9e-56 220.7 199 63.3
Lalb_Chr13g0296201 Lupinus albus HOM05D006985 ORTHO05D008749 1.3e-55 220.3 200 63.0
arahy.Tifrunner.gnm1.ann1.MHK3H7 Arachis hypogaea HOM05D006985 ORTHO05D008749 2.9e-55 219.2 200 62.5
CSS0027796 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 2.9e-55 219.2 161 73.3
Duzib147G0418 Durio zibethinus HOM05D006985 ORTHO05D008749 2.9e-55 219.2 199 62.8
Phvul.002G264600 Phaseolus vulgaris HOM05D006985 ORTHO05D008749 2.9e-55 219.2 200 63.5
CSS0005033 Camellia sinensis var. sinensis HOM05D006985 ORTHO05D008749 3.8e-55 218.8 162 72.8
Haze_25036 Corylus avellana HOM05D006985 ORTHO05D008749 3.8e-55 218.8 204 58.8
Manes.12G142400 Manihot esculenta HOM05D006985 ORTHO05D008749 4.9e-55 218.4 201 61.7
Nitab4.5_0000471g0030 Nicotiana tabacum HOM05D006985 ORTHO05D008749 4.9e-55 218.4 196 59.2
Sabra05G0069300 Salix brachista HOM05D006985 ORTHO05D008749 6.4e-55 218.0 173 68.2
Nn5g28916 Nelumbo nucifera HOM05D006985 ORTHO05D008749 8.4e-55 217.6 202 59.9
Potri.005G084200 Populus trichocarpa HOM05D006985 ORTHO05D008749 8.4e-55 217.6 200 62.5
Gohir.A02G134801 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.1e-54 217.2 201 64.2
THA.LOC104804144 Tarenaya hassleriana HOM05D006985 ORTHO05D008749 1.1e-54 217.2 203 58.6
Glyma.08G141300 Glycine max HOM05D006985 ORTHO05D008749 1.4e-54 216.9 201 62.2
Gohir.D03G045800 Gossypium hirsutum HOM05D006985 ORTHO05D008749 1.4e-54 216.9 200 63.0
Gorai.003G047000 Gossypium raimondii HOM05D006985 ORTHO05D008749 1.4e-54 216.9 200 63.0
Peaxi162Scf00323g00052 Petunia axillaris HOM05D006985 ORTHO05D008749 1.4e-54 216.9 198 60.1
VMungo0251G1437 Vigna mungo HOM05D006985 ORTHO05D008749 1.9e-54 216.5 190 64.7
Rhsim08G0007300 Rhododendron simsii HOM05D006985 ORTHO05D008749 3.2e-54 215.7 206 62.6
COL.COLO4_11016 Corchorus olitorius HOM05D006985 ORTHO05D008749 5.4e-54 214.9 198 62.6
Actinidia28892 Actinidia chinensis HOM05D006985 ORTHO05D008749 9.2e-54 214.2 193 61.1
GSVIVG01022222001 Vitis vinifera HOM05D006985 ORTHO05D008749 1.2e-53 213.8 198 61.1
Duzib187G0142 Durio zibethinus HOM05D006985 ORTHO05D008749 1.6e-53 213.4 199 61.8
Rhsim08G0006600 Rhododendron simsii HOM05D006985 ORTHO05D008749 1.6e-53 213.4 205 62.4
CAN.G276.1 Capsicum annuum HOM05D006985 ORTHO05D008749 2.1e-53 213.0 208 60.1
Rhsim10G0013600 Rhododendron simsii HOM05D006985 ORTHO05D008749 2.7e-53 212.6 206 62.1
PGSC0003DMG400016590 Solanum tuberosum HOM05D006985 ORTHO05D008749 2.7e-53 212.6 197 61.9
Glyma.05G183500 Glycine max HOM05D006985 ORTHO05D008749 3.5e-53 212.2 200 62.0
AL4G11290 Arabidopsis lyrata HOM05D006985 ORTHO05D008749 4.6e-53 211.8 203 57.1
Eucgr.I00326 Eucalyptus grandis HOM05D006985 ORTHO05D008749 4.6e-53 211.8 213 58.2
AT2G21970 Arabidopsis thaliana HOM05D006985 ORTHO05D008749 3.9e-52 208.8 203 57.1
A09p57880 Brassica napus HOM05D006985 ORTHO05D008749 6.6e-52 208.0 206 57.3
C08p41110 Brassica napus HOM05D006985 ORTHO05D008749 6.6e-52 208.0 206 57.3
BolC8t51677H Brassica oleracea HOM05D006985 ORTHO05D008749 6.6e-52 208.0 206 57.3
BraA09t41180Z Brassica rapa HOM05D006985 ORTHO05D008749 6.6e-52 208.0 206 57.3
PGR004G1495 Punica granatum HOM05D006985 ORTHO05D008749 6.6e-52 208.0 210 56.7
Lj2A564T40 Lonicera japonica HOM05D006985 ORTHO05D008749 1.1e-51 207.2 200 59.5
Sopen04g023520 Solanum pennellii HOM05D006985 ORTHO05D008749 1.1e-51 207.2 195 60.5
BcaC07g41109 Brassica carinata HOM05D006985 ORTHO05D008749 1.9e-51 206.5 206 56.8
Sp4g01050 Schrenkiella parvula HOM05D006985 ORTHO05D008749 1.9e-51 206.5 204 56.4
Ciclev10026526m.g Citrus clementina HOM05D006985 ORTHO05D008749 3.3e-51 205.7 153 69.3
Aa31LG7G14690 Aethionema arabicum HOM05D006985 ORTHO05D008749 4.3e-51 205.3 196 55.6
QL06p032211 Quercus lobata HOM05D006985 ORTHO05D008749 5.6e-51 204.9 207 58.9
Solyc04g053130.4 Solanum lycopersicum HOM05D006985 ORTHO05D008749 5.6e-51 204.9 196 61.2
Atru.chr4.358 Acer truncatum HOM05D006985 ORTHO05D008749 2.8e-50 202.6 202 58.4
HanXRQChr14g0446291 Helianthus annuus HOM05D006985 ORTHO05D008749 4.7e-50 201.8 205 56.1
Lsat_1_v5_gn_2_67381 Lactuca sativa HOM05D006985 ORTHO05D008749 4.7e-50 201.8 204 57.8
vmacro18630 Vaccinium macrocarpon HOM05D006985 ORTHO05D008749 4.7e-50 201.8 207 56.0
MBI02_g45734_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 8.1e-50 201.1 195 56.9
Cc07_g16120 Coffea canephora HOM05D006985 ORTHO05D008749 1.1e-49 200.7 159 67.9
Lj4g0016816 Lotus japonicus HOM05D006985 ORTHO05D008749 1.4e-49 200.3 203 58.1
Sed0020932 Sechium edule HOM05D006985 ORTHO05D008749 2.4e-49 199.5 174 62.6
BcaB08g35014 Brassica carinata HOM05D006985 ORTHO05D008749 3.1e-49 199.1 163 63.2
Hma1.2p1_0375F.1_g138690 Hydrangea macrophylla HOM05D006985 ORTHO05D008749 6.9e-49 198.0 170 64.7
Oeu028373.1 Olea europaea HOM05D006985 ORTHO05D008749 6.9e-49 198.0 201 57.2
Carub.0004s0111 Capsella rubella HOM05D006985 ORTHO05D008749 9.0e-49 197.6 206 54.9
Thhalv10000325m.g Eutrema salsugineum HOM05D006985 ORTHO05D008749 1.2e-48 197.2 198 56.1
ClCG01G016160 Citrullus lanatus HOM05D006985 ORTHO05D008749 2.0e-48 196.4 202 56.4
ECA238G4202 Erigeron canadensis HOM05D006985 ORTHO05D008749 5.8e-48 194.9 206 55.3
Cpa.g.sc196.10 Carica papaya HOM05D006985 ORTHO05D008749 2.2e-47 193.0 168 63.1
Oeu030683.1 Olea europaea HOM05D006985 ORTHO05D008749 2.2e-47 193.0 204 55.9
MSTRG.23313 Avicennia marina HOM05D006985 ORTHO05D008749 6.4e-47 191.4 173 58.4
MELO3C007486.2 Cucumis melo HOM05D006985 ORTHO05D008749 8.4e-47 191.0 176 61.9
Psat7g051440 Pisum sativum HOM05D006985 ORTHO05D008749 8.4e-47 191.0 191 57.6
DCAR_010078 Daucus carota HOM05D006985 ORTHO05D008749 1.1e-46 190.7 175 61.1
Dinv42695 Davidia involucrata HOM05D006985 ORTHO05D008749 7.1e-46 188.0 195 60.0
FAN26G1540 Fragaria x ananassa HOM05D000436 ORTHO05D000678 7.1e-46 188.0 109 89.9
MBI02_g20708_MAGBIO Magnolia biondii HOM05D006985 ORTHO05D008749 9.3e-46 187.6 179 57.0
Ca_17697_v3 Cicer arietinum L. HOM05D006985 ORTHO05D008749 1.6e-45 186.8 198 56.6
CsaV3_6G042430 Cucumis sativus L. HOM05D006985 ORTHO05D008749 2.7e-45 186.0 176 59.7
Migut.H02428 Erythranthe guttata HOM05D006985 ORTHO05D008749 4.6e-45 185.3 197 56.9
Dinv19490 Davidia involucrata HOM05D006985 ORTHO05D008749 3.0e-44 182.6 144 66.7
SalBow6G7167 Salvia bowleyana HOM05D006985 ORTHO05D008749 6.6e-44 181.4 180 56.7
Sc16g0004160 Simmondsia chinensis HOM05D006985 ORTHO05D008749 4.3e-43 178.7 194 55.7
CDE02G4368 Ceratophyllum demersum HOM05D006985 ORTHO05D008749 5.6e-43 178.3 153 60.8
Aqoxy5G01954 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 1.1e-41 174.1 154 57.1
Os04g0639200 Oryza sativa ssp. japonica HOM05D006985 ORTHO05D008749 1.1e-41 174.1 200 51.5
SGA_v2.0_scaffold51G18747 Striga asiatica HOM05D006985 ORTHO05D008749 1.4e-41 173.7 151 59.6
Aqoxy7G01607 Aquilegia oxysepala HOM05D006985 ORTHO05D008749 4.0e-41 172.2 154 57.1
Zm00001eb431840 Zea mays HOM05D006985 ORTHO05D008749 2.0e-40 169.9 204 50.0
AUR62003309 Chenopodium quinoa HOM05D006985 ORTHO05D008749 1.7e-39 166.8 202 48.5
AUR62016276 Chenopodium quinoa HOM05D006985 ORTHO05D008749 3.8e-39 165.6 202 50.0
Hund03540 Selenicereus undatus HOM05D006985 ORTHO05D008749 3.8e-39 165.6 200 50.0
Ah.03g141710 Amaranthus hybridus HOM05D006985 ORTHO05D008749 8.4e-39 164.5 211 49.8
EL10Ac6g14751 Beta vulgaris HOM05D006985 ORTHO05D008749 4.2e-38 162.2 185 51.9
HPP92_013077 Vanilla planifolia HOM05D006985 ORTHO05D008749 5.1e-36 155.2 153 52.9
MSTRG.3810 Avicennia marina HOM05D006985 ORTHO05D008749 8.7e-36 154.5 147 55.8
PSO210G1005 Papaver somniferum HOM05D006985 ORTHO05D008749 1.1e-35 154.1 188 45.2
ATR0564G194 Amborella trichopoda HOM05D006985 ORTHO05D008749 1.8e-33 146.7 146 54.8
SEGI_00004 Sequoiadendron giganteum HOM05D006985 ORTHO05D008749 2.5e-30 136.3 148 48.6
CARHR113060 Cardamine hirsuta HOM05D006985 ORTHO05D008749 1.5e-27 127.1 92 68.5
PSO170G0586 Papaver somniferum HOM05D006985 ORTHO05D008749 8.7e-20 101.3 142 44.4
Hund19658 Selenicereus undatus HOM05D006985 ORTHO05D008749 2.8e-18 96.3 112 46.4
CARHR113050 Cardamine hirsuta HOM05D006985 ORTHO05D008749 6.5e-15 85.1 117 47.9
AagrBONN_evm.TU.Sc2ySwM_362.2621 Anthoceros agrestis HOM05D006985 ORTHO05D008749 1.2e-13 80.9 154 35.1
SMO174G0105 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 1.6e-13 80.5 143 35.0
unitig_88.g27736 Utricularia gibba HOM05D006985 ORTHO05D008749 1.6e-13 80.5 93 47.3
SMO356G0636 Selaginella moellendorffii HOM05D006985 ORTHO05D008749 7.9e-13 78.2 145 31.7
CBR_g770 Chara braunii HOM05D006985 ORTHO05D008749 3.3e-11 72.8 139 31.7
Pp3c16_13700 Physcomitrium patens HOM05D006985 ORTHO05D008749 5.7e-11 72.0 160 33.8
CDE08G1171 Ceratophyllum demersum HOM05D000290 ORTHO05D009072 7.4e-11 71.6 85 50.6
Mapoly0007s0046 Marchantia polymorpha HOM05D006985 ORTHO05D008749 4.1e-09 65.9 143 30.1
Pp3c27_3810 Physcomitrium patens HOM05D006985 ORTHO05D008749 8.5e-07 58.2 142 32.4


User provided reference genes

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