Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0114321 Rosa chinensis HOM05D002111 ORTHO05D002160 5.6e-25 116.7 55 100.0
RcHm_v2.0_Chr2g0114361 Rosa chinensis HOM05D002111 ORTHO05D002160 1.4e-12 75.5 39 92.3
RcHm_v2.0_Chr2g0113981 Rosa chinensis HOM05D002111 ORTHO05D002160 4.2e-12 73.9 35 97.1
RcHm_v2.0_Chr2g0113891 Rosa chinensis HOM05D002111 ORTHO05D002160 5.5e-12 73.6 41 87.8
RcHm_v2.0_Chr2g0113791 Rosa chinensis HOM05D002111 ORTHO05D002160 1.3e-10 68.9 39 84.6
FAN23G1977 Fragaria x ananassa HOM05D002111 ORTHO05D002160 1.8e-10 68.6 35 91.4
RcHm_v2.0_Chr2g0114391 Rosa chinensis HOM05D002111 ORTHO05D002160 1.8e-10 68.6 35 91.4
FAN28G1556 Fragaria x ananassa HOM05D002111 ORTHO05D002160 1.1e-09 65.9 34 91.2
MD15G1324300 Malus domestica HOM05D002111 ORTHO05D002160 3.7e-08 60.8 35 80.0
FvH4_1g20920 Fragaria vesca HOM05D002111 ORTHO05D002160 6.3e-08 60.1 31 90.3
FAN19G2413 Fragaria x ananassa HOM05D002111 ORTHO05D002160 6.3e-08 60.1 31 90.3
FAN26G0864 Fragaria x ananassa HOM05D002111 ORTHO05D002160 6.3e-08 60.1 31 90.3
Thecc.01G101700 Theobroma cacao HOM05D002111 ORTHO05D002160 1.4e-07 58.9 33 81.8
THA.LOC104824875 Tarenaya hassleriana HOM05D002111 ORTHO05D002160 5.3e-07 57.0 42 64.3
Eucgr.H04786 Eucalyptus grandis HOM05D002111 ORTHO05D002160 6.9e-07 56.6 40 75.0
CANSAT01G1806 Cannabis sativa HOM05D002111 ORTHO05D002160 1.5e-06 55.5 39 69.2
TWI53G1715 Tripterygium wilfordii HOM05D002111 ORTHO05D002160 1.5e-06 55.5 53 56.6
Ciclev10025897m.g Citrus clementina HOM05D002111 ORTHO05D002160 2.0e-06 55.1 33 78.8
Duzib264G1191 Durio zibethinus HOM05D002111 ORTHO05D002160 2.0e-06 55.1 34 76.5
Prupe.6G186700 Prunus persica HOM05D002111 ORTHO05D002160 2.0e-06 55.1 34 76.5
MSTRG.23342 Avicennia marina HOM05D002111 ORTHO05D002160 3.4e-06 54.3 35 77.1
QL06p049551 Quercus lobata HOM05D002111 ORTHO05D002160 3.4e-06 54.3 33 75.8
COL.COLO4_09962 Corchorus olitorius HOM05D002111 ORTHO05D002160 5.9e-06 53.5 31 77.4
Gohir.A02G143300 Gossypium hirsutum HOM05D002111 ORTHO05D002160 5.9e-06 53.5 33 72.7
Gohir.D03G037200 Gossypium hirsutum HOM05D002111 ORTHO05D002160 5.9e-06 53.5 33 72.7
Gorai.003G039000 Gossypium raimondii HOM05D002111 ORTHO05D002160 5.9e-06 53.5 33 72.7
CARHR246830 Cardamine hirsuta HOM05D002111 ORTHO05D002160 7.7e-06 53.1 38 68.4
Duzib147G0507 Durio zibethinus HOM05D002111 ORTHO05D002160 7.7e-06 53.1 33 75.8
Atru.chr4.66 Acer truncatum HOM05D002111 ORTHO05D002160 1.0e-05 52.8 32 78.1
Gorai.008G096200 Gossypium raimondii HOM05D002111 ORTHO05D002160 1.0e-05 52.8 33 75.8


User provided reference genes

Program Settings