Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0112381 Rosa chinensis HOM05D013332 ORTHO05D004477 4.0e-96 354.8 177 100.0
FAN23G0907 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.1e-77 293.5 174 85.6
FAN26G3011 Fragaria x ananassa HOM05D013332 ORTHO05D004477 4.5e-76 288.1 179 83.2
FAN19G2695 Fragaria x ananassa HOM05D013332 ORTHO05D004477 1.7e-75 286.2 179 82.1
FAN28G1274 Fragaria x ananassa HOM05D013332 ORTHO05D004477 8.6e-75 283.9 174 83.3
FvH4_1g20240 Fragaria vesca HOM05D013332 ORTHO05D004477 1.5e-71 273.1 179 79.3
CiPaw.03G145800 Carya illinoinensis HOM05D008176 ORTHO05D004477 3.0e-19 99.4 176 44.3
QL06p048130 Quercus lobata HOM05D008176 ORTHO05D004477 1.1e-16 90.9 168 44.0
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 6.9e-16 88.2 167 41.9
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 1.5e-15 87.0 175 39.4
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 3.4e-15 85.9 174 41.4
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 7.6e-15 84.7 161 42.2
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 1.0e-14 84.3 173 35.3
Manes.12G129900 Manihot esculenta HOM05D008176 ORTHO05D004477 1.3e-14 84.0 167 43.7
CiPaw.04G103600 Carya illinoinensis HOM05D008176 ORTHO05D004477 5.0e-14 82.0 175 42.3
COL.COLO4_27295 Corchorus olitorius HOM05D008176 ORTHO05D004477 6.5e-14 81.6 173 38.7
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 4.2e-13 79.0 161 39.1
Duzib187G0825 Durio zibethinus HOM05D008176 ORTHO05D004477 9.3e-13 77.8 173 42.2
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 9.3e-13 77.8 161 39.1
Duzib264G0386 Durio zibethinus HOM05D008176 ORTHO05D004477 1.2e-12 77.4 165 40.6
Nitab4.5_0000128g0240 Nicotiana tabacum HOM05D008176 ORTHO05D004477 1.6e-12 77.0 158 40.5
Haze_24851 Corylus avellana HOM05D008176 ORTHO05D004477 4.6e-12 75.5 178 38.8
Thecc.01G095600 Theobroma cacao HOM05D008176 ORTHO05D004477 7.9e-12 74.7 174 37.4
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 3.0e-11 72.8 173 41.0
Nitab4.5_0012818g0010 Nicotiana tabacum HOM05D008176 ORTHO05D004477 5.1e-11 72.0 164 39.0
Sopen05g029890 Solanum pennellii HOM05D008176 ORTHO05D004477 1.1e-10 70.9 161 37.3
Glyma.18G015000 Glycine max HOM05D008176 ORTHO05D004477 2.5e-10 69.7 156 37.2
Sc26g0000200 Simmondsia chinensis HOM05D013332 ORTHO05D004477 2.5e-10 69.7 156 39.1
Glyma.11G242100 Glycine max HOM05D008176 ORTHO05D004477 1.3e-09 67.4 162 36.4
Gohir.A11G051100 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.3e-09 67.4 181 35.9
TPR.G16006 Trifolium pratense HOM05D008176 ORTHO05D004477 2.2e-09 66.6 182 33.0
TWI53G0271 Tripterygium wilfordii HOM05D008176 ORTHO05D004477 2.2e-09 66.6 175 33.7
Phvul.001G253900 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 4.8e-09 65.5 173 34.7
PGSC0003DMG400016792 Solanum tuberosum HOM05D008176 ORTHO05D004477 4.8e-09 65.5 161 34.8
Gorai.007G059700 Gossypium raimondii HOM05D008176 ORTHO05D004477 6.3e-09 65.1 180 34.4
VMungo1383G1959 Vigna mungo HOM05D008176 ORTHO05D004477 6.3e-09 65.1 162 37.0
Gohir.A02G129700 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.1e-08 64.3 173 31.2
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.1e-08 64.3 173 34.7
Sc23g0000380 Simmondsia chinensis HOM05D008046 ORTHO05D004477 1.4e-08 63.9 155 37.4
Ciclev10026640m.g Citrus clementina HOM05D008176 ORTHO05D004477 2.4e-08 63.2 168 36.3
Medtr3g086830 Medicago truncatula HOM05D008176 ORTHO05D004477 2.4e-08 63.2 179 32.4
Nitab4.5_0003888g0010 Nicotiana tabacum HOM05D013332 ORTHO05D004477 3.1e-08 62.8 106 38.7
COL.COLO4_12009 Corchorus olitorius HOM05D008046 ORTHO05D004477 4.1e-08 62.4 169 32.0
Prupe.6G193200 Prunus persica HOM05D013332 ORTHO05D004477 4.1e-08 62.4 201 31.8
Aqoxy6G00716 Aquilegia oxysepala HOM05D008046 ORTHO05D004477 5.3e-08 62.0 169 34.3
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 5.3e-08 62.0 176 34.7
Ca_08988_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 6.9e-08 61.6 165 33.3
Glyma.08G133100 Glycine max HOM05D008176 ORTHO05D004477 6.9e-08 61.6 169 32.5
CANSAT01G0943 Cannabis sativa HOM05D013332 ORTHO05D004477 9.0e-08 61.2 177 32.2
Hma1.2p1_0019F.1_g013800 Hydrangea macrophylla HOM05D013332 ORTHO05D004477 9.0e-08 61.2 181 30.9
Gorai.003G041400 Gossypium raimondii HOM05D008176 ORTHO05D004477 1.2e-07 60.8 173 33.5
Gohir.D03G040500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 1.5e-07 60.5 173 32.9
Nitab4.5_0000241g0190 Nicotiana tabacum HOM05D008176 ORTHO05D004477 2.0e-07 60.1 106 37.7
Lsat_1_v5_gn_1_3180 Lactuca sativa HOM05D008046 ORTHO05D004477 3.4e-07 59.3 166 31.9
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 3.4e-07 59.3 174 31.6
Gohir.D11G054500 Gossypium hirsutum HOM05D008176 ORTHO05D004477 7.7e-07 58.2 182 36.8
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.3e-06 57.4 148 35.8
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 1.3e-06 57.4 175 33.1
Phvul.002G260800 Phaseolus vulgaris HOM05D008176 ORTHO05D004477 1.3e-06 57.4 170 30.0
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.2e-06 56.6 149 35.6
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.2e-06 56.6 163 33.1
Psat5g090880 Pisum sativum HOM05D008176 ORTHO05D004477 2.2e-06 56.6 168 32.1
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 3.8e-06 55.8 163 33.1
Cfa002600 Carpinus fangiana HOM05D008176 ORTHO05D004477 3.8e-06 55.8 176 35.2
Ah.02g126210 Amaranthus hybridus HOM05D031888 ORTHO05D004477 6.5e-06 55.1 197 29.9
Glyma.05G175800 Glycine max HOM05D008176 ORTHO05D004477 6.5e-06 55.1 171 31.0
Potri.005G072000 Populus trichocarpa HOM05D008176 ORTHO05D004477 6.5e-06 55.1 175 30.9
Ca_16509_v3 Cicer arietinum L. HOM05D008176 ORTHO05D004477 8.5e-06 54.7 161 33.5


User provided reference genes

Program Settings