Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 2.3e-45 185.3 97 100.0
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 4.6e-38 161.0 95 89.5
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 4.6e-38 161.0 97 88.7
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.0e-37 159.8 95 89.5
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.0e-37 158.3 97 88.7
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 3.9e-37 157.9 94 89.4
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 5.6e-28 127.5 94 75.5
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 3.7e-27 124.8 94 73.4
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 2.4e-26 122.1 92 73.9
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 3.1e-26 121.7 93 75.3
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.6e-25 118.6 92 71.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 5.8e-25 117.5 93 71.0
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 9.9e-25 116.7 95 69.5
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 1.3e-24 116.3 92 70.7
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 2.2e-24 115.5 92 70.7
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 7.1e-23 110.5 96 65.6
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.7e-22 108.6 94 69.1
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 7.9e-22 107.1 93 66.7
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 7.9e-22 107.1 93 66.7
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.0e-21 106.7 93 65.6
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 1.3e-21 106.3 93 66.7
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 1.8e-21 105.9 93 63.4
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 3.0e-21 105.1 94 66.0
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 3.9e-21 104.8 92 65.2
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 5.1e-21 104.4 95 61.1
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 5.1e-21 104.4 92 66.3
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 1.1e-20 103.2 97 60.8
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.5e-20 102.8 92 67.4
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 1.5e-20 102.8 92 67.4
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 1.9e-20 102.4 93 63.4
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.9e-20 102.4 93 63.4
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 2.5e-20 102.1 101 62.4
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 3.3e-20 101.7 92 63.0
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 3.3e-20 101.7 92 63.0
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 3.3e-20 101.7 93 62.4
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 4.3e-20 101.3 93 61.3
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 4.3e-20 101.3 93 62.4
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 1.3e-19 99.8 92 63.0
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 2.1e-19 99.0 92 62.0
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 2.1e-19 99.0 92 62.0
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 2.1e-19 99.0 95 60.0
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 6.2e-19 97.4 95 58.9
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 1.1e-18 96.7 92 60.9
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 1.4e-18 96.3 92 62.0
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 1.8e-18 95.9 96 60.4
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 3.1e-18 95.1 92 60.9
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 4.0e-18 94.7 95 61.1
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 5.3e-18 94.4 92 64.1
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 5.3e-18 94.4 87 64.4
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 5.3e-18 94.4 87 64.4
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.2e-17 93.2 96 57.3
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.5e-17 92.8 98 56.1
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 2.6e-17 92.0 94 55.3
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 2.6e-17 92.0 84 63.1
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 3.4e-17 91.7 87 62.1
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 3.4e-17 91.7 97 54.6
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 4.5e-17 91.3 98 56.1
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.0e-16 90.1 92 57.6
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 3.8e-16 88.2 86 61.6
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.9e-15 85.9 88 55.7
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 4.2e-15 84.7 95 55.8
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 5.5e-15 84.3 92 54.3
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 7.1e-15 84.0 67 68.7
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 9.3e-15 83.6 84 61.9
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 9.3e-15 83.6 57 80.7
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 1.6e-14 82.8 94 51.1
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 1.6e-14 82.8 87 52.9
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 2.1e-14 82.4 69 66.7
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.1e-14 82.4 92 51.1
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 2.1e-14 82.4 96 53.1
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 4.6e-14 81.3 93 48.4
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 1.3e-13 79.7 92 54.3
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 6.7e-13 77.4 98 53.1
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 2.2e-11 72.4 83 55.4
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 3.8e-08 61.6 49 69.4
Nn5g29873 Nelumbo nucifera HOM05D007889 ORTHO05D009987 2.1e-06 55.8 88 46.6
TAR381G0304 Trochodendron aralioides HOM05D007889 ORTHO05D009987 2.1e-06 55.8 89 46.1


User provided reference genes

Program Settings