Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0107991 Rosa chinensis HOM05D006223 ORTHO05D012503 1.7e-28 128.6 66 100.0
FAN28G0296 Fragaria x ananassa HOM05D006223 ORTHO05D012503 1.9e-19 98.6 61 83.6
Cfa004129 Carpinus fangiana HOM05D006223 ORTHO05D012503 7.5e-16 86.7 64 67.2
Thecc.01G072400 Theobroma cacao HOM05D006223 ORTHO05D009080 3.5e-13 77.8 66 63.6
Cpa.g.sc6.20 Carica papaya HOM05D006223 ORTHO05D012503 5.0e-12 73.9 66 59.1
Phvul.003G235200 Phaseolus vulgaris HOM05D006223 ORTHO05D012503 1.5e-11 72.4 67 53.7
Gorai.007G223300 Gossypium raimondii HOM05D006223 ORTHO05D012503 3.3e-11 71.2 66 56.1
Gohir.A11G215100 Gossypium hirsutum HOM05D006223 ORTHO05D012503 7.3e-11 70.1 66 54.5
Gorai.008G083700 Gossypium raimondii HOM05D006223 ORTHO05D012503 7.3e-11 70.1 66 54.5
Glyma.05G105400 Glycine max HOM05D006223 ORTHO05D012503 1.2e-10 69.3 69 53.6
Gohir.A12G077200 Gossypium hirsutum HOM05D006223 ORTHO05D012503 1.2e-10 69.3 66 54.5
Glyma.17G161000 Glycine max HOM05D006223 ORTHO05D012503 2.8e-10 68.2 69 52.2
TPR.G24236 Trifolium pratense HOM05D006223 ORTHO05D012503 3.6e-10 67.8 66 51.5
Lj4g0020529 Lotus japonicus HOM05D006223 ORTHO05D012503 1.0e-09 66.2 61 52.5
Potri.012G080700 Populus trichocarpa HOM05D006223 ORTHO05D012503 5.2e-09 63.9 66 51.5
Dinv26928 Davidia involucrata HOM05D006223 ORTHO05D012503 6.8e-09 63.5 67 52.2
Lalb_Chr09g0334081 Lupinus albus HOM05D006223 ORTHO05D012503 7.0e-06 53.5 65 40.0


User provided reference genes

Program Settings