Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.2e-177 626.3 306 100.0
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 2.2e-174 615.5 306 98.4
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.3e-174 614.0 306 98.0
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.0e-171 606.7 322 93.8
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.7e-163 579.3 306 91.8
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 4.2e-162 574.7 306 91.2
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 3.0e-160 568.5 306 90.2
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 1.5e-156 556.2 306 85.9
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 1.0e-155 553.5 306 86.3
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 2.2e-155 552.4 276 97.8
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 5.5e-154 547.7 306 85.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.5e-154 547.7 275 97.5
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.5e-151 539.7 307 84.4
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 5.7e-151 537.7 306 85.3
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 9.7e-151 537.0 307 84.0
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.4e-149 532.3 307 82.7
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 3.1e-149 531.9 306 82.4
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 4.1e-149 531.6 306 82.4
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 4.1e-149 531.6 307 82.7
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 5.3e-149 531.2 306 82.7
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 9.1e-149 530.4 306 83.3
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 9.1e-149 530.4 307 83.1
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 1.2e-148 530.0 306 82.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 2.6e-148 528.9 306 82.0
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 2.6e-148 528.9 306 83.0
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 4.5e-148 528.1 306 82.0
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 4.5e-148 528.1 307 82.1
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 7.7e-148 527.3 307 82.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 1.0e-147 526.9 307 81.4
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.9e-147 525.4 307 81.8
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 6.5e-147 524.2 306 82.0
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 1.1e-146 523.5 307 81.8
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.5e-146 522.3 307 81.4
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.5e-146 522.3 306 81.0
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 3.2e-146 521.9 306 81.7
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.2e-146 521.5 307 81.4
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 5.5e-146 521.2 307 82.1
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 7.2e-146 520.8 307 82.7
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 2.1e-145 519.2 307 81.1
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 8.0e-145 517.3 306 80.1
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 1.0e-144 516.9 307 79.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 4.0e-144 515.0 307 79.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.0e-144 515.0 306 80.7
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 6.7e-144 514.2 307 81.1
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 6.7e-144 514.2 307 81.1
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 6.7e-144 514.2 307 79.5
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 8.8e-144 513.8 307 80.1
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 1.5e-143 513.1 390 67.4
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 78.5
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.5e-143 513.1 307 80.5
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 4.4e-143 511.5 307 80.8
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.2e-142 509.2 307 78.2
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 4.8e-142 508.1 307 77.9
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.8e-141 506.1 307 79.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 7.0e-141 504.2 304 78.9
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 3.5e-140 501.9 307 77.2
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 1.0e-139 500.4 307 76.9
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 2.2e-139 499.2 307 76.9
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 8.5e-139 497.3 288 82.3
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 2.5e-138 495.7 307 76.5
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 2.5e-138 495.7 307 76.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 3.2e-138 495.4 307 77.2
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 1.2e-135 486.9 307 74.9
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 4.4e-135 485.0 358 68.4
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 8.3e-134 480.7 371 64.7
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 3.1e-133 478.8 305 77.7
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 1.2e-132 476.9 307 73.3
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 5.9e-132 474.6 370 65.4
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.7e-131 473.0 307 72.3
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 5.0e-131 471.5 306 72.2
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 1.9e-130 469.5 306 72.2
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.8e-129 465.7 292 79.1
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 3.6e-129 465.3 307 71.3
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 6.8e-128 461.1 307 71.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 8.6e-123 444.1 307 71.7
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 7.3e-122 441.0 307 69.4
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 2.8e-121 439.1 285 74.0
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 5.2e-120 434.9 293 73.7
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 2.9e-118 429.1 278 73.7
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.2e-117 424.1 277 73.3
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 1.3e-115 420.2 243 82.3
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 8.9e-112 407.5 310 62.9
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 2.6e-111 406.0 235 83.0
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 1.9e-109 399.8 312 62.5
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 1.6e-105 386.7 307 64.8
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 4.9e-102 375.2 306 57.8
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 2.7e-100 369.4 297 59.9
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.1e-98 364.0 236 73.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.9e-77 293.5 315 47.6
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.5e-74 283.9 243 60.1
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 6.2e-73 278.5 185 70.3
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.4e-61 240.7 134 83.6
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 1.1e-56 224.6 310 41.3
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 1.5e-55 220.7 565 29.4
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.5e-55 219.2 170 68.2
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 7.7e-55 218.4 281 42.7
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 1.4e-53 214.2 148 69.6
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.2e-23 114.8 88 68.2
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 5.0e-22 109.4 70 67.1
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.5e-21 107.1 226 32.3
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 1.6e-20 104.4 96 51.0
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 3.6e-20 103.2 72 69.4
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 3.7e-09 66.6 39 79.5
Rhsim08G0136300 Rhododendron simsii HOM05D007381 ORTHO05D006450 5.9e-07 59.3 53 60.4
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 8.6e-06 55.5 164 29.9


User provided reference genes

Program Settings