Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0105071 Rosa chinensis HOM05D005929 ORTHO05D007869 0.0e+00 1345.1 719 100.0
FAN28G0152 Fragaria x ananassa HOM05D005929 ORTHO05D007869 0.0e+00 1239.6 719 92.4
FAN23G0057 Fragaria x ananassa HOM05D005929 ORTHO05D007869 0.0e+00 1231.1 719 91.7
FAN26G1042 Fragaria x ananassa HOM05D005929 ORTHO05D007869 0.0e+00 1228.4 719 91.5
FvH4_1g15790 Fragaria vesca HOM05D005929 ORTHO05D007869 0.0e+00 1224.9 719 91.9
FAN19G1416 Fragaria x ananassa HOM05D005929 ORTHO05D007869 0.0e+00 1223.8 719 91.8
Prupe.7G135500 Prunus persica HOM05D005929 ORTHO05D007869 0.0e+00 1094.7 727 82.5
MD00G1045200 Malus domestica HOM05D005929 ORTHO05D007869 0.0e+00 1083.6 731 81.7
MD02G1169700 Malus domestica HOM05D005929 ORTHO05D007869 9.8e-312 1073.2 727 81.4
Manes.12G099700 Manihot esculenta HOM05D005929 ORTHO05D007869 3.3e-290 1001.5 724 75.7
Cfa004003 Carpinus fangiana HOM05D005929 ORTHO05D007869 7.3e-282 973.8 731 75.5
CSS0000081 Camellia sinensis var. sinensis HOM05D005929 ORTHO05D007869 8.1e-281 970.3 726 75.2
Ciclev10025029m.g Citrus clementina HOM05D005929 ORTHO05D007869 9.9e-279 963.4 726 73.1
Potri.005G137100 Populus trichocarpa HOM05D005929 ORTHO05D007869 9.9e-279 963.4 727 72.4
Dinv39868 Davidia involucrata HOM05D005929 ORTHO05D007869 3.8e-278 961.4 724 75.1
GSVIVG01022148001 Vitis vinifera HOM05D005929 ORTHO05D007869 1.1e-277 959.9 723 73.0
Actinidia16503 Actinidia chinensis HOM05D005929 ORTHO05D007869 7.3e-274 947.2 724 72.8
Sabra05G0109600 Salix brachista HOM05D005929 ORTHO05D007869 5.8e-271 937.6 723 71.9
CANSAT56G1082 Cannabis sativa HOM05D005929 ORTHO05D007869 9.9e-271 936.8 733 71.9
ClCG01G016760 Citrullus lanatus HOM05D005929 ORTHO05D007869 4.9e-270 934.5 725 70.5
TAR628G1297 Trochodendron aralioides HOM05D005929 ORTHO05D007869 7.1e-269 930.6 727 71.5
TPR.G19031 Trifolium pratense HOM05D005929 ORTHO05D007869 3.0e-267 925.2 725 70.6
MELO3C007555.2 Cucumis melo HOM05D005929 ORTHO05D007869 1.9e-266 922.5 723 70.3
Glyma.17G175900 Glycine max HOM05D005929 ORTHO05D007869 2.5e-266 922.2 722 70.9
CsaV3_6G043190 Cucumis sativus L. HOM05D005929 ORTHO05D007869 3.3e-266 921.8 723 70.1
VMungo0251G2155 Vigna mungo HOM05D005929 ORTHO05D007869 1.3e-265 919.8 726 69.6
Lj4g0006502 Lotus japonicus HOM05D005929 ORTHO05D007869 3.6e-265 918.3 722 71.7
Phvul.003G244900 Phaseolus vulgaris HOM05D005929 ORTHO05D007869 3.6e-265 918.3 725 69.1
Gorai.007G211400 Gossypium raimondii HOM05D005929 ORTHO05D007869 4.8e-265 917.9 724 69.5
COL.COLO4_11392 Corchorus olitorius HOM05D005929 ORTHO05D007869 8.1e-265 917.1 723 70.3
Thecc.01G053700 Theobroma cacao HOM05D005929 ORTHO05D007869 2.4e-264 915.6 722 70.8
Psat4g087280 Pisum sativum HOM05D005929 ORTHO05D007869 5.3e-264 914.4 725 69.0
Ca_21176_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 2.0e-263 912.5 724 70.2
Glyma.05G084300 Glycine max HOM05D005929 ORTHO05D007869 2.0e-263 912.5 724 69.2
Lalb_Chr05g0226621 Lupinus albus HOM05D005929 ORTHO05D007869 2.9e-262 908.7 727 67.5
CiPaw.01G019600 Carya illinoinensis HOM05D005929 ORTHO05D007869 8.4e-262 907.1 729 71.1
Sed0025648 Sechium edule HOM05D005929 ORTHO05D007869 1.9e-261 906.0 727 68.5
Duzib147G0952 Durio zibethinus HOM05D005929 ORTHO05D007869 3.2e-261 905.2 723 69.4
MBI06_g04503_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D007869 6.0e-260 901.0 744 68.7
TWI09G0459 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 7.9e-260 900.6 724 70.7
CiPaw.02G008900 Carya illinoinensis HOM05D005929 ORTHO05D007869 1.8e-259 899.4 728 69.8
Nn1g05837 Nelumbo nucifera HOM05D005929 ORTHO05D007869 1.6e-257 892.9 742 68.2
TWI53G1997 Tripterygium wilfordii HOM05D005929 ORTHO05D007869 8.1e-257 890.6 724 68.2
Gorai.003G022900 Gossypium raimondii HOM05D005929 ORTHO05D007869 1.1e-256 890.2 722 68.7
Gohir.D03G021300 Gossypium hirsutum HOM05D005929 ORTHO05D007869 2.6e-255 885.6 722 68.0
PGR102G2065 Punica granatum HOM05D005929 ORTHO05D007869 2.6e-255 885.6 732 66.8
Gohir.A02G159200 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.8e-254 881.7 722 68.1
Gohir.A11G190800 Gossypium hirsutum HOM05D005929 ORTHO05D007869 3.2e-253 878.6 724 68.0
Atru.chr3.351 Acer truncatum HOM05D005929 ORTHO05D007869 6.2e-249 864.4 638 74.1
Gohir.D11G197600 Gossypium hirsutum HOM05D005929 ORTHO05D007869 6.2e-249 864.4 724 67.7
Cc07_g05890 Coffea canephora HOM05D005929 ORTHO05D007869 2.0e-247 859.4 727 66.9
Eucgr.H02007 Eucalyptus grandis HOM05D005929 ORTHO05D007869 2.7e-244 849.0 733 66.3
THA.LOC104821272 Tarenaya hassleriana HOM05D005929 ORTHO05D007869 1.5e-242 843.2 729 66.1
Lj4A143G78 Lonicera japonica HOM05D005929 ORTHO05D007869 9.7e-242 840.5 726 66.7
arahy.Tifrunner.gnm1.ann1.UKY0C7 Arachis hypogaea HOM05D005929 ORTHO05D007869 6.3e-241 837.8 802 61.0
EL10Ac6g15157 Beta vulgaris HOM05D005929 ORTHO05D007869 6.3e-241 837.8 732 65.2
Rhsim08G0101600 Rhododendron simsii HOM05D005929 ORTHO05D007869 2.0e-239 832.8 945 55.2
MSTRG.23760 Avicennia marina HOM05D005929 ORTHO05D007869 6.5e-238 827.8 723 65.0
DCAR_010904 Daucus carota HOM05D005929 ORTHO05D007869 1.1e-237 827.0 723 65.7
Sc03g0001480 Simmondsia chinensis HOM05D005929 ORTHO05D007869 7.2e-237 824.3 724 63.8
Migut.H00446 Erythranthe guttata HOM05D005929 ORTHO05D007869 4.6e-236 821.6 722 63.7
PSO170G4100 Papaver somniferum HOM05D005929 ORTHO05D007869 1.4e-235 820.1 729 63.1
Hund13561 Selenicereus undatus HOM05D005929 ORTHO05D007869 1.4e-235 820.1 732 65.6
PSO210G3061 Papaver somniferum HOM05D005929 ORTHO05D007869 2.5e-234 815.8 729 62.8
Oeu039068.2 Olea europaea HOM05D005929 ORTHO05D007869 1.5e-231 806.6 756 60.4
SGA_v2.0_scaffold15G07274 Striga asiatica HOM05D005929 ORTHO05D007869 2.6e-231 805.8 727 61.5
Lsat_1_v5_gn_4_168021 Lactuca sativa HOM05D005929 ORTHO05D007869 1.4e-229 800.0 711 64.7
vmacro17944 Vaccinium macrocarpon HOM05D005929 ORTHO05D007869 9.4e-229 797.3 931 53.6
PGSC0003DMG400015776 Solanum tuberosum HOM05D005929 ORTHO05D007869 1.0e-227 793.9 727 64.6
Nitab4.5_0010605g0010 Nicotiana tabacum HOM05D005929 ORTHO05D007869 6.7e-227 791.2 734 62.4
Peaxi162Scf00964g00160 Petunia axillaris HOM05D005929 ORTHO05D007869 7.4e-226 787.7 733 61.8
QL06p041881 Quercus lobata HOM05D005929 ORTHO05D007869 1.4e-224 783.5 594 72.9
HanXRQChr15g0490721 Helianthus annuus HOM05D005929 ORTHO05D007869 3.5e-223 778.9 718 62.8
Thhalv10003742m.g Eutrema salsugineum HOM05D005929 ORTHO05D007869 7.7e-223 777.7 730 59.5
Solyc02g090650.4 Solanum lycopersicum HOM05D005929 ORTHO05D007869 1.0e-222 777.3 723 64.2
Sopen02g035300 Solanum pennellii HOM05D005929 ORTHO05D007869 2.2e-222 776.2 727 64.1
CAN.G836.71 Capsicum annuum HOM05D005929 ORTHO05D007869 1.9e-221 773.1 726 62.8
HPP92_009382 Vanilla planifolia HOM05D005929 ORTHO05D007869 9.4e-221 770.8 727 61.6
ECA232G2456 Erigeron canadensis HOM05D005929 ORTHO05D007869 1.8e-219 766.5 723 62.0
Sp2g29870 Schrenkiella parvula HOM05D005929 ORTHO05D007869 5.7e-218 761.5 733 59.1
Aa31LG1G15360 Aethionema arabicum HOM05D005929 ORTHO05D007869 7.4e-218 761.1 775 57.9
ATR0100G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 7.4e-218 761.1 729 59.1
Nitab4.5_0000310g0090 Nicotiana tabacum HOM05D005929 ORTHO05D007869 9.7e-218 760.8 734 61.0
AL8G44640 Arabidopsis lyrata HOM05D005929 ORTHO05D007869 3.1e-216 755.7 732 60.1
Aqoxy5G01270 Aquilegia oxysepala HOM05D005929 ORTHO05D007869 9.1e-216 754.2 719 61.1
Carub.0008s2770 Capsella rubella HOM05D005929 ORTHO05D007869 1.8e-211 740.0 732 59.4
BraA07t29438Z Brassica rapa HOM05D005929 ORTHO05D007869 2.0e-210 736.5 728 57.8
C07p24970 Brassica napus HOM05D005929 ORTHO05D007869 3.4e-210 735.7 728 57.4
BcaC06g34750 Brassica carinata HOM05D005929 ORTHO05D007869 1.7e-209 733.4 728 57.3
A07p17110 Brassica napus HOM05D005929 ORTHO05D007869 4.8e-209 731.9 729 57.8
Os10g0382300 Oryza sativa ssp. japonica HOM05D005929 ORTHO05D007869 1.3e-206 723.8 736 57.5
BolC7t43027H Brassica oleracea HOM05D005929 ORTHO05D007869 1.1e-205 720.7 752 55.5
unitig_899.g14965 Utricularia gibba HOM05D005929 ORTHO05D007869 9.4e-205 717.6 753 57.2
BcaB02g09988 Brassica carinata HOM05D005929 ORTHO05D007869 6.1e-204 714.9 728 56.6
Hma1.2p1_0200F.1_g086000 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 7.5e-202 708.0 582 68.0
Ca_22183_v3 Cicer arietinum L. HOM05D005929 ORTHO05D007869 1.8e-200 703.4 589 66.9
Zm00001eb223840 Zea mays HOM05D005929 ORTHO05D007869 7.7e-199 698.0 733 55.7
AUR62003860 Chenopodium quinoa HOM05D005929 ORTHO05D007869 2.8e-193 679.5 624 60.6
Cpa.g.sc55.172 Carica papaya HOM05D005929 ORTHO05D007869 8.3e-193 677.9 553 66.9
AUR62001947 Chenopodium quinoa HOM05D005929 ORTHO05D007869 3.5e-191 672.5 618 60.4
Duzib264G1189 Durio zibethinus HOM05D005929 ORTHO05D007869 1.3e-190 670.6 719 55.6
Lalb_Chr09g0333751 Lupinus albus HOM05D005929 ORTHO05D007869 8.0e-180 634.8 537 65.5
Ah.03g144730 Amaranthus hybridus HOM05D005929 ORTHO05D007869 2.8e-172 609.8 597 61.1
CARHR280890 Cardamine hirsuta HOM05D005929 ORTHO05D007869 2.0e-162 577.0 598 55.7
AT5G66810 Arabidopsis thaliana HOM05D005929 ORTHO05D007869 9.9e-154 548.1 521 61.0
Pp3c4_14260 Physcomitrium patens HOM05D005929 ORTHO05D007869 5.8e-138 495.7 778 42.9
Mapoly0148s0013 Marchantia polymorpha HOM05D005929 ORTHO05D007869 7.6e-130 468.8 802 40.6
SMO116G0373 Selaginella moellendorffii HOM05D005929 ORTHO05D007869 6.5e-113 412.5 721 36.8
Haze_15421 Corylus avellana HOM05D005929 ORTHO05D007869 4.8e-108 396.4 467 54.6
SalBow1G6022 Salvia bowleyana HOM05D005929 ORTHO05D007869 9.7e-101 372.1 301 66.8
CDE10G0678 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 1.9e-96 357.8 275 67.3
CDE10G0504 Ceratophyllum demersum HOM05D005929 ORTHO05D007869 2.0e-90 337.8 451 49.2
Hma1.2p1_0200F.1_g086010 Hydrangea macrophylla HOM05D005929 ORTHO05D007869 1.3e-76 292.0 310 55.8
SEGI_10908 Sequoiadendron giganteum HOM05D005929 ORTHO05D000002 1.4e-75 288.5 450 42.9
RcHm_v2.0_Chr7g0235891 Rosa chinensis HOM05D005929 ORTHO05D007869 2.8e-71 274.2 192 77.1
PSO782G4943 Papaver somniferum HOM05D005929 ORTHO05D007869 5.1e-57 226.9 182 66.5
Dinv29975 Davidia involucrata HOM05D005929 ORTHO05D007869 6.6e-57 226.5 366 44.0
DCAR_001419 Daucus carota HOM05D005929 ORTHO05D007869 2.0e-53 214.9 289 46.4
Lalb_Chr09g0333761 Lupinus albus HOM05D005929 ORTHO05D007869 7.3e-48 196.4 157 75.2
PSO339G4212 Papaver somniferum HOM05D005929 ORTHO05D007869 2.9e-44 184.5 154 61.7
QL06p041873 Quercus lobata HOM05D005929 ORTHO05D007869 1.1e-43 182.6 131 83.2
Cpa.g.sc55.170 Carica papaya HOM05D005929 ORTHO05D007869 7.1e-43 179.9 133 81.2
MD15G1282000 Malus domestica HOM05D005929 ORTHO05D007869 7.8e-42 176.4 107 89.7
MD15G1282100 Malus domestica HOM05D005929 ORTHO05D007869 1.8e-38 165.2 97 89.7
ATR0833G001 Amborella trichopoda HOM05D005929 ORTHO05D007869 5.6e-32 143.7 132 62.1
QL06p041946 Quercus lobata HOM05D005929 ORTHO05D007869 1.7e-28 132.1 152 53.9
Lsat_1_v5_gn_2_14601 Lactuca sativa HOM05D005929 ORTHO05D029973 7.1e-27 126.7 156 51.3
MBI08_g05057_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 6.9e-22 110.2 115 53.0
Lsat_1_v5_gn_2_40080 Lactuca sativa HOM05D005929 ORTHO05D029973 3.7e-07 61.2 121 38.8
MBI16_g22817_MAGBIO Magnolia biondii HOM05D005929 ORTHO05D029973 3.1e-06 58.2 35 82.9
Cre01.g029050 Chlamydomonas reinhardtii HOM05D003178 ORTHO05D003636 5.3e-06 57.4 139 33.8


User provided reference genes

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