Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0103311 Rosa chinensis HOM05D008334 ORTHO05D010366 1.1e-51 206.5 111 100.0
FAN19G2894 Fragaria x ananassa HOM05D008334 ORTHO05D010366 9.3e-43 176.8 112 85.7
FvH4_1g14560 Fragaria vesca HOM05D008334 ORTHO05D010366 1.2e-42 176.4 112 85.7
FAN23G2256 Fragaria x ananassa HOM05D008334 ORTHO05D010366 1.9e-40 169.1 112 84.8
FAN28G2207 Fragaria x ananassa HOM05D008334 ORTHO05D010366 7.3e-40 167.2 112 83.9
Prupe.7G144800 Prunus persica HOM05D008334 ORTHO05D010366 4.2e-19 98.2 117 59.0
Prupe.7G144900 Prunus persica HOM05D008334 ORTHO05D010366 1.3e-17 93.2 111 56.8
Manes.13G131800 Manihot esculenta HOM05D008334 ORTHO05D010366 1.7e-12 76.3 114 43.0
Sabra05G0106400 Salix brachista HOM05D008334 ORTHO05D010366 3.2e-11 72.0 111 45.0
CiPaw.01G028200 Carya illinoinensis HOM05D008334 ORTHO05D010366 4.2e-11 71.6 111 45.9
Glyma.11G060500 Glycine max HOM05D008334 ORTHO05D010366 5.5e-11 71.2 112 42.9
Potri.005G131000 Populus trichocarpa HOM05D008334 ORTHO05D010366 9.4e-11 70.5 111 41.4
Nitab4.5_0001014g0160 Nicotiana tabacum HOM05D008334 ORTHO05D010366 3.6e-10 68.6 111 43.2
Ciclev10026829m.g Citrus clementina HOM05D008334 ORTHO05D010366 4.6e-10 68.2 117 46.2
COL.COLO4_22186 Corchorus olitorius HOM05D008334 ORTHO05D010366 6.1e-10 67.8 115 40.9
Manes.12G094900 Manihot esculenta HOM05D008334 ORTHO05D010366 7.9e-10 67.4 111 39.6
Potri.007G034700 Populus trichocarpa HOM05D008334 ORTHO05D010366 2.3e-09 65.9 110 40.9
Migut.H00500 Erythranthe guttata HOM05D008334 ORTHO05D010366 3.0e-09 65.5 113 42.5
Medtr5g018540 Medicago truncatula HOM05D008334 ORTHO05D010366 3.0e-09 65.5 112 39.3
Lj2g0004238 Lotus japonicus HOM05D008334 ORTHO05D010366 5.1e-09 64.7 89 47.2
Peaxi162Scf00535g00717 Petunia axillaris HOM05D008334 ORTHO05D010366 5.1e-09 64.7 111 41.4
Dinv26771 Davidia involucrata HOM05D004524 ORTHO05D005477 6.7e-09 64.3 90 45.6
Lj4g0011963 Lotus japonicus HOM05D008334 ORTHO05D010366 1.1e-08 63.5 113 43.4
QL06p044185 Quercus lobata HOM05D008334 ORTHO05D010366 1.5e-08 63.2 115 41.7
TPR.G29861 Trifolium pratense HOM05D008334 ORTHO05D010366 1.5e-08 63.2 113 38.1
Atru.chr3.465 Acer truncatum HOM05D008334 ORTHO05D010366 1.9e-08 62.8 119 41.2
Atru.chr3.467 Acer truncatum HOM05D008334 ORTHO05D010366 4.3e-08 61.6 119 41.2
TAR381G1599 Trochodendron aralioides HOM05D008210 ORTHO05D010078 7.4e-08 60.8 111 38.7
DCAR_010943 Daucus carota HOM05D008334 ORTHO05D010366 1.3e-07 60.1 118 42.4
Nitab4.5_0000108g0210 Nicotiana tabacum HOM05D008334 ORTHO05D010366 1.3e-07 60.1 89 43.8
Glyma.01G182200 Glycine max HOM05D008334 ORTHO05D010366 1.7e-07 59.7 77 46.8
SGA_v2.0_scaffold15G07210 Striga asiatica HOM05D008334 ORTHO05D010366 1.7e-07 59.7 113 42.5
Oeu032927.1 Olea europaea HOM05D008334 ORTHO05D010366 2.2e-07 59.3 108 38.9
arahy.Tifrunner.gnm1.ann1.HXSC1S Arachis hypogaea HOM05D008334 ORTHO05D010366 2.8e-07 58.9 112 41.1
Thecc.01G046100 Theobroma cacao HOM05D008334 ORTHO05D010366 4.8e-07 58.2 112 40.2
Psat0s4220g0080 Pisum sativum HOM05D008334 ORTHO05D010366 6.3e-07 57.8 116 35.3
Duzib147G0108 Durio zibethinus HOM05D008334 ORTHO05D010366 8.2e-07 57.4 112 41.1
Haze_15171 Corylus avellana HOM05D008334 ORTHO05D010366 1.1e-06 57.0 116 40.5
Eucgr.I01021 Eucalyptus grandis HOM05D008334 ORTHO05D010366 1.1e-06 57.0 114 38.6
Glyma.16G144100 Glycine max HOM05D008334 ORTHO05D010366 2.4e-06 55.8 118 41.5
CsaV3_6G042740 Cucumis sativus L. HOM05D037312 ORTHO05D010366 4.1e-06 55.1 111 39.6
Lalb_Chr05g0226961 Lupinus albus HOM05D008334 ORTHO05D010366 4.1e-06 55.1 105 40.0
MELO3C007512.2 Cucumis melo HOM05D037312 ORTHO05D010366 5.3e-06 54.7 111 40.5
Phvul.002G023200 Phaseolus vulgaris HOM05D008334 ORTHO05D010366 5.3e-06 54.7 111 38.7
PGSC0003DMG400010112 Solanum tuberosum HOM05D008334 ORTHO05D010366 5.3e-06 54.7 97 40.2
Aqoxy2G03320 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 9.1e-06 53.9 112 38.4
Aqoxy6G00952 Aquilegia oxysepala HOM05D008210 ORTHO05D010078 9.1e-06 53.9 112 38.4
VMungo1215G2475 Vigna mungo HOM05D008334 ORTHO05D010366 9.1e-06 53.9 98 41.8


User provided reference genes

Program Settings