Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0103011 Rosa chinensis HOM05D007898 ORTHO05D010010 6.4e-85 317.4 161 100.0
FAN28G1054 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.5e-73 278.9 161 88.2
FAN23G0801 Fragaria x ananassa HOM05D007898 ORTHO05D010010 6.2e-72 274.2 161 86.3
FvH4_1g14340 Fragaria vesca HOM05D007898 ORTHO05D010010 6.8e-71 270.8 161 87.0
Prupe.7G146700 Prunus persica HOM05D007898 ORTHO05D010010 9.6e-57 223.8 173 71.1
FAN26G2880 Fragaria x ananassa HOM05D007898 ORTHO05D010010 1.3e-56 223.4 130 86.9
CiPaw.02G014000 Carya illinoinensis HOM05D007898 ORTHO05D010010 1.6e-56 223.0 166 68.7
CANSAT01G0863 Cannabis sativa HOM05D007898 ORTHO05D010010 8.1e-56 220.7 168 68.5
MD15G1271500 Malus domestica HOM05D007898 ORTHO05D010010 9.9e-54 213.8 165 71.5
QL06p044475 Quercus lobata HOM05D007898 ORTHO05D010010 1.7e-53 213.0 165 67.3
TWI73G0930 Tripterygium wilfordii HOM05D007898 ORTHO05D010010 1.2e-51 206.8 160 65.6
Manes.12G096600 Manihot esculenta HOM05D007898 ORTHO05D010010 6.0e-51 204.5 166 62.0
Cfa004248 Carpinus fangiana HOM05D007898 ORTHO05D010010 1.0e-50 203.8 167 65.3
Sabra07G0028800 Salix brachista HOM05D007898 ORTHO05D010010 5.1e-50 201.4 163 63.2
Potri.007G032900 Populus trichocarpa HOM05D007898 ORTHO05D010010 1.6e-48 196.4 158 63.9
Thecc.01G044100 Theobroma cacao HOM05D007898 ORTHO05D010010 3.1e-47 192.2 167 60.5
GSVIVG01019045001 Vitis vinifera HOM05D007898 ORTHO05D010010 5.8e-46 188.0 164 59.8
CsaV3_6G042630 Cucumis sativus L. HOM05D007898 ORTHO05D010010 2.9e-45 185.7 169 56.8
TAR381G0528 Trochodendron aralioides HOM05D007898 ORTHO05D010010 2.9e-45 185.7 166 56.0
ClCG01G016310 Citrullus lanatus HOM05D007898 ORTHO05D010010 4.9e-45 184.9 168 56.0
MELO3C007502.2 Cucumis melo HOM05D007898 ORTHO05D010010 8.4e-45 184.1 167 58.1
Gohir.D04G029100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 4.2e-44 181.8 168 57.7
Gohir.A02G162400 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.5e-44 181.4 168 58.3
Gohir.D03G018100 Gossypium hirsutum HOM05D007898 ORTHO05D010010 5.5e-44 181.4 168 57.7
Sed0027812 Sechium edule HOM05D007898 ORTHO05D010010 1.6e-43 179.9 166 56.0
PGR142G0285 Punica granatum HOM05D007898 ORTHO05D010010 1.0e-42 177.2 162 59.3
TPR.G31555 Trifolium pratense HOM05D007898 ORTHO05D010010 5.1e-42 174.9 157 59.2
arahy.Tifrunner.gnm1.ann1.P18VIJ Arachis hypogaea HOM05D007898 ORTHO05D010010 1.9e-41 172.9 154 56.5
Gorai.012G033200 Gossypium raimondii HOM05D007898 ORTHO05D010010 7.4e-41 171.0 175 53.7
CSS0023760 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 2.8e-40 169.1 171 54.4
Gohir.D04G023600 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.8e-40 169.1 172 53.5
CSS0004703 Camellia sinensis var. sinensis HOM05D007898 ORTHO05D010010 3.7e-40 168.7 172 54.1
Oeu043831.1 Olea europaea HOM05D007898 ORTHO05D010010 3.7e-40 168.7 162 59.3
THA.LOC104819816 Tarenaya hassleriana HOM05D007898 ORTHO05D010010 3.7e-40 168.7 165 54.5
Hma1.2p1_0261F.1_g104820 Hydrangea macrophylla HOM05D007898 ORTHO05D010010 8.2e-40 167.5 152 59.9
Dinv26786 Davidia involucrata HOM05D007898 ORTHO05D010010 1.8e-39 166.4 129 66.7
Gohir.D04G023900 Gossypium hirsutum HOM05D007898 ORTHO05D010010 2.4e-39 166.0 175 52.6
PSO170G4740 Papaver somniferum HOM05D007898 ORTHO05D010010 1.2e-38 163.7 163 54.6
AT2G23755 Arabidopsis thaliana HOM05D007898 ORTHO05D010010 2.6e-38 162.5 161 57.1
Eucgr.K01101 Eucalyptus grandis HOM05D007898 ORTHO05D010010 5.8e-38 161.4 165 53.3
Gohir.A05G386500 Gossypium hirsutum HOM05D007898 ORTHO05D010010 7.6e-38 161.0 167 53.3
AL4G13750 Arabidopsis lyrata HOM05D007898 ORTHO05D010010 1.7e-37 159.8 164 53.7
FAN19G2518 Fragaria x ananassa HOM05D007898 ORTHO05D010010 2.9e-37 159.1 93 88.2
CARHR114600 Cardamine hirsuta HOM05D007898 ORTHO05D010010 3.8e-37 158.7 164 54.9
Carub.0004s0293 Capsella rubella HOM05D007898 ORTHO05D010010 1.1e-36 157.1 159 54.7
Thhalv10000478m.g Eutrema salsugineum HOM05D007898 ORTHO05D010010 1.6e-35 153.3 192 49.5
Gorai.003G018300 Gossypium raimondii HOM05D007898 ORTHO05D010010 3.0e-34 149.1 173 54.3
Nn1g05126 Nelumbo nucifera HOM05D007898 ORTHO05D010010 5.1e-34 148.3 166 50.6
Sopen02g034650 Solanum pennellii HOM05D007898 ORTHO05D010010 1.5e-33 146.7 155 53.5
Migut.K00847 Erythranthe guttata HOM05D007898 ORTHO05D010010 2.5e-33 146.0 156 53.8
Peaxi162Scf00535g00419 Petunia axillaris HOM05D007898 ORTHO05D010010 1.3e-32 143.7 178 48.3
Nitab4.5_0004932g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 2.2e-32 142.9 163 50.3
arahy.Tifrunner.gnm1.ann1.376QVY Arachis hypogaea HOM05D007898 ORTHO05D010010 3.7e-32 142.1 115 60.0
Ah.03g142230 Amaranthus hybridus HOM05D007898 ORTHO05D010010 1.8e-31 139.8 149 49.0
Solyc02g089960.3 Solanum lycopersicum HOM05D007898 ORTHO05D010010 2.4e-31 139.4 153 52.9
PGSC0003DMG400010085 Solanum tuberosum HOM05D007898 ORTHO05D010010 2.4e-31 139.4 152 52.6
CDE02G3439 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 3.1e-31 139.0 146 50.7
Ciclev10027359m.g Citrus clementina HOM05D007898 ORTHO05D010010 5.3e-31 138.3 128 57.8
Nitab4.5_0000483g0020 Nicotiana tabacum HOM05D007898 ORTHO05D010010 1.2e-30 137.1 152 50.0
Lj7P13T39 Lonicera japonica HOM05D007898 ORTHO05D010010 1.5e-30 136.7 122 56.6
CAN.G836.11 Capsicum annuum HOM05D007898 ORTHO05D010010 1.3e-29 133.7 152 50.7
SalBow1G4022 Salvia bowleyana HOM05D007898 ORTHO05D010010 1.3e-29 133.7 153 49.0
ATR0053G039 Amborella trichopoda HOM05D007898 ORTHO05D010010 2.9e-29 132.5 152 46.7
Cc07_g05300 Coffea canephora HOM05D007898 ORTHO05D010010 2.5e-28 129.4 151 51.7
AUR62008035 Chenopodium quinoa HOM05D007898 ORTHO05D010010 4.6e-27 125.2 135 51.1
A09p56800 Brassica napus HOM05D007898 ORTHO05D010010 6.7e-26 121.3 134 50.0
BolC8t51548H Brassica oleracea HOM05D007898 ORTHO05D010010 3.3e-25 119.0 134 50.0
C08p39760 Brassica napus HOM05D007898 ORTHO05D010010 5.7e-25 118.2 134 50.0
SHI08702 Sapria himalayana HOM05D007898 ORTHO05D010010 2.8e-24 115.9 112 56.2
Lj4g0012479 Lotus japonicus HOM05D007898 ORTHO05D010010 4.8e-24 115.2 113 55.8
Haze_15152 Corylus avellana HOM05D007898 ORTHO05D010010 1.5e-22 110.2 166 43.4
Hund14127 Selenicereus undatus HOM05D007898 ORTHO05D010010 7.7e-22 107.8 169 41.4
SGA_v2.0_scaffold62G21534 Striga asiatica HOM05D007898 ORTHO05D010010 1.3e-21 107.1 133 46.6
AUR62003213 Chenopodium quinoa HOM05D007898 ORTHO05D010010 1.7e-21 106.7 106 50.0
BraA09t41069Z Brassica rapa HOM05D007898 ORTHO05D010010 2.5e-20 102.8 109 53.2
TAR374G1689 Trochodendron aralioides HOM05D007898 ORTHO05D010010 1.6e-19 100.1 80 58.8
EL10Ac6g14865 Beta vulgaris HOM05D007898 ORTHO05D010010 6.1e-19 98.2 135 43.7
CDE02G3192 Ceratophyllum demersum HOM05D007898 ORTHO05D010010 6.1e-19 98.2 123 44.7
SEGI_13764 Sequoiadendron giganteum HOM05D007898 ORTHO05D010010 7.4e-17 91.3 107 49.5
Actinidia30992 Actinidia chinensis HOM05D007898 ORTHO05D010010 4.8e-16 88.6 168 39.9
Medtr8g078730 Medicago truncatula HOM05D007898 ORTHO05D010010 8.2e-08 61.2 118 38.1


User provided reference genes

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