Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0101891 Rosa chinensis HOM05D007518 ORTHO05D008168 1.1e-60 236.9 163 100.0
FvH4_1g13510 Fragaria vesca HOM05D007518 ORTHO05D008168 1.0e-53 213.8 166 93.4
FAN19G2612 Fragaria x ananassa HOM05D007518 ORTHO05D008168 1.0e-53 213.8 166 93.4
FAN28G1656 Fragaria x ananassa HOM05D007518 ORTHO05D008168 2.9e-53 212.2 166 92.8
Prupe.7G152700 Prunus persica HOM05D007518 ORTHO05D008168 2.3e-42 176.0 167 80.8
MD15G1264900 Malus domestica HOM05D007518 ORTHO05D008168 4.8e-40 168.3 167 77.8
MD02G1150400 Malus domestica HOM05D007518 ORTHO05D008168 2.7e-38 162.5 164 76.2
Thecc.01G037800 Theobroma cacao HOM05D007518 ORTHO05D008168 1.9e-36 156.4 164 76.8
QL06p045656 Quercus lobata HOM05D007518 ORTHO05D008168 9.4e-36 154.1 163 74.2
Gohir.D03G015500 Gossypium hirsutum HOM05D007518 ORTHO05D008168 1.2e-35 153.7 164 74.4
Gorai.003G015700 Gossypium raimondii HOM05D007518 ORTHO05D008168 1.2e-35 153.7 164 74.4
Gohir.A02G164600 Gossypium hirsutum HOM05D007518 ORTHO05D008168 3.6e-35 152.1 164 73.8
CAN.G1028.6 Capsicum annuum HOM05D007518 ORTHO05D008168 4.7e-35 151.8 168 72.0
Haze_15107 Corylus avellana HOM05D007518 ORTHO05D008168 4.7e-35 151.8 164 73.2
CANSAT01G2215 Cannabis sativa HOM05D007518 ORTHO05D008168 8.0e-35 151.0 165 75.2
CiPaw.02G016200 Carya illinoinensis HOM05D007518 ORTHO05D008168 6.8e-34 147.9 164 73.2
Cfa004294 Carpinus fangiana HOM05D007518 ORTHO05D008168 8.8e-34 147.5 164 73.2
COL.COLO4_22099 Corchorus olitorius HOM05D007518 ORTHO05D008168 8.8e-34 147.5 166 71.7
Lj2g0015504 Lotus japonicus HOM05D007518 ORTHO05D008168 8.8e-34 147.5 156 73.7
Rhsim10G0067800 Rhododendron simsii HOM05D007518 ORTHO05D008168 1.5e-33 146.7 164 73.8
Atru.chr3.555 Acer truncatum HOM05D007518 ORTHO05D008168 2.0e-33 146.4 166 70.5
Ah.03g139360 Amaranthus hybridus HOM05D007518 ORTHO05D008168 2.6e-33 146.0 165 72.1
AUR62003171 Chenopodium quinoa HOM05D007518 ORTHO05D008168 5.7e-33 144.8 165 71.5
Lalb_Chr09g0322501 Lupinus albus HOM05D007518 ORTHO05D008168 5.7e-33 144.8 163 71.8
Migut.L00282 Erythranthe guttata HOM05D007518 ORTHO05D008168 9.8e-33 144.1 163 71.2
CSS0014655 Camellia sinensis var. sinensis HOM05D007518 ORTHO05D008168 1.3e-32 143.7 166 72.9
TWI53G0381 Tripterygium wilfordii HOM05D007518 ORTHO05D008168 1.3e-32 143.7 167 72.5
Sabra07G0023900 Salix brachista HOM05D007518 ORTHO05D008168 2.2e-32 142.9 165 72.1
Lsat_1_v5_gn_3_78660 Lactuca sativa HOM05D007518 ORTHO05D008168 2.8e-32 142.5 169 70.4
Lj2P450T11 Lonicera japonica HOM05D007518 ORTHO05D008168 4.8e-32 141.7 130 86.9
Ciclev10026615m.g Citrus clementina HOM05D007518 ORTHO05D008168 8.3e-32 141.0 161 71.4
Aqoxy6G01075 Aquilegia oxysepala HOM05D007518 ORTHO05D008168 1.4e-31 140.2 166 71.1
Medtr5g019920 Medicago truncatula HOM05D007518 ORTHO05D008168 1.4e-31 140.2 165 70.9
PGSC0003DMG400017778 Solanum tuberosum HOM05D007518 ORTHO05D008168 1.8e-31 139.8 135 79.3
Nitab4.5_0016476g0010 Nicotiana tabacum HOM05D007518 ORTHO05D008168 2.4e-31 139.4 128 85.2
PGR119G2546 Punica granatum HOM05D007518 ORTHO05D008168 2.4e-31 139.4 165 69.7
TAR628G0256 Trochodendron aralioides HOM05D007518 ORTHO05D008168 2.4e-31 139.4 165 71.5
HanXRQChr16g0530261 Helianthus annuus HOM05D007518 ORTHO05D008168 4.1e-31 138.7 166 72.9
Cfa004293 Carpinus fangiana HOM05D007518 ORTHO05D008168 5.4e-31 138.3 163 71.8
Potri.007G027400 Populus trichocarpa HOM05D007518 ORTHO05D008168 5.4e-31 138.3 165 69.7
arahy.Tifrunner.gnm1.ann1.RRU65L Arachis hypogaea HOM05D007518 ORTHO05D008168 7.0e-31 137.9 165 70.3
AUR62007988 Chenopodium quinoa HOM05D006571 ORTHO05D007771 7.0e-31 137.9 133 82.7
DCAR_021444 Daucus carota HOM05D007518 ORTHO05D008168 7.0e-31 137.9 167 70.7
arahy.Tifrunner.gnm1.ann1.5UMV3I Arachis hypogaea HOM05D007518 ORTHO05D008168 9.1e-31 137.5 165 69.7
TPR.G28676 Trifolium pratense HOM05D007518 ORTHO05D008168 9.1e-31 137.5 166 70.5
Thhalv10010782m.g Eutrema salsugineum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 163 71.2
Solyc03g034070.1 Solanum lycopersicum HOM05D007518 ORTHO05D008168 1.2e-30 137.1 115 88.7
Sopen03g006850 Solanum pennellii HOM05D007518 ORTHO05D008168 1.2e-30 137.1 115 88.7
MELO3C007820.2 Cucumis melo HOM05D007518 ORTHO05D008168 2.7e-30 136.0 136 79.4
CsaV3_6G046170 Cucumis sativus L. HOM05D007518 ORTHO05D008168 2.7e-30 136.0 136 79.4
Eucgr.I02457 Eucalyptus grandis HOM05D007518 ORTHO05D008168 2.7e-30 136.0 168 70.8
THA.LOC104821280 Tarenaya hassleriana HOM05D007518 ORTHO05D008168 2.7e-30 136.0 157 70.7
Glyma.11G067100 Glycine max HOM05D007518 ORTHO05D008168 3.5e-30 135.6 165 70.3
A06p05270 Brassica napus HOM05D007518 ORTHO05D008168 4.5e-30 135.2 165 70.9
BraA06t23735Z Brassica rapa HOM05D007518 ORTHO05D008168 4.5e-30 135.2 165 70.9
MBI16_g37747_MAGBIO Magnolia biondii HOM05D007518 ORTHO05D008168 4.5e-30 135.2 166 69.3
VMungo1215G2461 Vigna mungo HOM05D007518 ORTHO05D008168 1.0e-29 134.0 134 79.1
Aa31LG4G18840 Aethionema arabicum HOM05D007518 ORTHO05D008168 1.3e-29 133.7 165 69.7
BolC5t29390H Brassica oleracea HOM05D007518 ORTHO05D008168 1.3e-29 133.7 165 70.9
C05p06340 Brassica napus HOM05D007518 ORTHO05D008168 3.8e-29 132.1 165 70.3
Sed0026205 Sechium edule HOM05D007518 ORTHO05D008168 3.8e-29 132.1 164 70.7
PSO541G1957 Papaver somniferum HOM05D007518 ORTHO05D008168 6.6e-29 131.3 150 72.7
Sp5g11540 Schrenkiella parvula HOM05D007518 ORTHO05D008168 1.1e-28 130.6 165 70.9
Cc07_g09360 Coffea canephora HOM05D007518 ORTHO05D008168 1.5e-28 130.2 167 68.3
PSO675G1394 Papaver somniferum HOM05D007518 ORTHO05D008168 1.5e-28 130.2 135 77.8
Nitab4.5_0001038g0130 Nicotiana tabacum HOM05D007518 ORTHO05D008168 1.9e-28 129.8 128 82.0
Manes.01G134000 Manihot esculenta HOM05D007518 ORTHO05D008168 2.5e-28 129.4 166 67.5
Nn1g05049 Nelumbo nucifera HOM05D007518 ORTHO05D008168 4.2e-28 128.6 166 69.3
Oeu007443.1 Olea europaea HOM05D007518 ORTHO05D008168 4.2e-28 128.6 167 67.7
CARHR160200 Cardamine hirsuta HOM05D007518 ORTHO05D008168 5.5e-28 128.3 163 69.3
Carub.0005s1701 Capsella rubella HOM05D007518 ORTHO05D008168 7.2e-28 127.9 164 68.9
AL5G30840 Arabidopsis lyrata HOM05D007518 ORTHO05D008168 1.2e-27 127.1 165 68.5
Peaxi162Scf00751g00045 Petunia axillaris HOM05D007518 ORTHO05D008168 1.2e-27 127.1 142 54.2
AT3G50685 Arabidopsis thaliana HOM05D007518 ORTHO05D008168 2.8e-27 125.9 165 68.5
Ca_00386_v3 Cicer arietinum L. HOM05D007518 ORTHO05D008168 3.6e-27 125.6 128 64.8
ECA246G0481 Erigeron canadensis HOM05D000085 ORTHO05D000274 8.0e-27 124.4 158 74.1
Phvul.002G029100 Phaseolus vulgaris HOM05D007518 ORTHO05D008168 8.0e-27 124.4 168 66.1
SGA_v2.0_scaffold248G44914 Striga asiatica HOM05D007518 ORTHO05D008168 6.8e-26 121.3 164 67.7
Duzib187G0536 Durio zibethinus HOM05D007518 ORTHO05D008168 8.9e-26 120.9 100 69.0
unitig_62.g23458 Utricularia gibba HOM05D007518 ORTHO05D008168 2.6e-25 119.4 128 73.4
Dinv26823 Davidia involucrata HOM05D002420 ORTHO05D002422 5.7e-25 118.2 157 69.4
Mapoly0168s0019 Marchantia polymorpha HOM05D007518 ORTHO05D008168 7.5e-25 117.9 129 78.3
Pp3c15_7720 Physcomitrium patens HOM05D007518 ORTHO05D008168 2.8e-24 115.9 132 68.9
Sc03g0000780 Simmondsia chinensis HOM05D007518 ORTHO05D008168 2.8e-24 115.9 162 65.4
BcaB07g34066 Brassica carinata HOM05D007518 ORTHO05D008168 1.4e-23 113.6 182 42.9
Actinidia12117 Actinidia chinensis HOM05D007518 ORTHO05D008168 3.2e-23 112.5 104 63.5
Psat2g160680 Pisum sativum HOM05D007518 ORTHO05D008168 5.4e-23 111.7 121 80.2
ATR0733G025 Amborella trichopoda HOM05D007518 ORTHO05D008168 5.9e-22 108.2 113 81.4
SMO361G0359 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.3e-21 106.3 113 75.2
SEGI_19868 Sequoiadendron giganteum HOM05D007518 ORTHO05D008168 1.9e-20 103.2 175 57.7
CBR_g37409 Chara braunii HOM05D007518 ORTHO05D008168 5.6e-20 101.7 118 45.8
BcaB07g34065 Brassica carinata HOM05D007518 ORTHO05D008168 1.2e-19 100.5 101 60.4
HPP92_023606 Vanilla planifolia HOM05D007518 ORTHO05D008168 4.0e-18 95.5 161 62.7
Zm00001eb098970 Zea mays HOM05D007518 ORTHO05D008168 2.9e-16 89.4 118 71.2
Actinidia02774 Actinidia chinensis HOM05D007518 ORTHO05D008168 1.9e-15 86.7 129 45.0
AagrBONN_evm.TU.Sc2ySwM_228.2926 Anthoceros agrestis HOM05D007518 ORTHO05D008168 3.5e-14 82.4 128 64.8
unitig_65.g29889 Utricularia gibba HOM05D007518 ORTHO05D008168 7.8e-14 81.3 89 69.7
PRCOL_00004191 Prasinoderma coloniale HOM05D007518 ORTHO05D008168 2.3e-13 79.7 114 66.7
SMO361G0415 Selaginella moellendorffii HOM05D007518 ORTHO05D008168 2.8e-11 72.8 105 38.1
Cre01.g043200 Chlamydomonas reinhardtii HOM05D007518 ORTHO05D008168 6.8e-10 68.2 59 57.6
MCO12G314 Micromonas commoda HOM05D007518 ORTHO05D008168 1.5e-09 67.0 48 66.7
Os10g0213700 Oryza sativa ssp. japonica HOM05D007518 ORTHO05D008168 2.6e-09 66.2 163 53.4
Atru.chr4.788 Acer truncatum HOM05D007518 ORTHO05D008168 4.6e-06 55.5 34 79.4


User provided reference genes

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