Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0099071 Rosa chinensis HOM05D050184 ORTHO05D046252 1.3e-131 473.0 235 100.0
FvH4_1g11472 Fragaria vesca HOM05D050184 ORTHO05D046252 1.0e-51 207.6 194 63.4
Hma1.2p1_0432F.1_g151730 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 1.9e-08 63.9 131 35.1
COL.COLO4_37189 Corchorus olitorius HOM05D001099 ORTHO05D000958 4.1e-08 62.8 97 39.2
GSVIVG01001315001 Vitis vinifera HOM05D001099 ORTHO05D000958 7.0e-08 62.0 93 37.6
MBI05_g10091_MAGBIO Magnolia biondii HOM05D001099 ORTHO05D000958 9.2e-08 61.6 129 35.7
Oeu038321.1 Olea europaea HOM05D001099 ORTHO05D000958 9.2e-08 61.6 90 40.0
Hund14531 Selenicereus undatus HOM05D001099 ORTHO05D000958 1.2e-07 61.2 89 40.4
Gorai.004G199300 Gossypium raimondii HOM05D001099 ORTHO05D000958 2.0e-07 60.5 125 34.4
Gohir.D08G189200 Gossypium hirsutum HOM05D001099 ORTHO05D000958 2.7e-07 60.1 125 34.4
Cc08_g12550 Coffea canephora HOM05D001099 ORTHO05D000958 3.5e-07 59.7 100 36.0
PGR031G0040 Punica granatum HOM05D001099 ORTHO05D000958 3.5e-07 59.7 85 41.2
QL12p012417 Quercus lobata HOM05D001099 ORTHO05D000958 3.5e-07 59.7 86 39.5
Thecc.03G155700 Theobroma cacao HOM05D001099 ORTHO05D000958 3.5e-07 59.7 91 37.4
MELO3C013946.2 Cucumis melo HOM05D001099 ORTHO05D000958 4.6e-07 59.3 90 38.9
CsaV3_3G002780 Cucumis sativus L. HOM05D001099 ORTHO05D000958 4.6e-07 59.3 90 38.9
Dinv21632 Davidia involucrata HOM05D001099 ORTHO05D000958 4.6e-07 59.3 90 38.9
Gohir.D12G201000 Gossypium hirsutum HOM05D001099 ORTHO05D000958 4.6e-07 59.3 83 39.8
Gorai.008G216100 Gossypium raimondii HOM05D001099 ORTHO05D000958 4.6e-07 59.3 83 39.8
GSVIVG01001316001 Vitis vinifera HOM05D001099 ORTHO05D000958 4.6e-07 59.3 93 36.6
MELO3C013945.2 Cucumis melo HOM05D001099 ORTHO05D000958 6.0e-07 58.9 90 38.9
RcHm_v2.0_Chr1g0374411 Rosa chinensis HOM05D001099 ORTHO05D000958 6.0e-07 58.9 89 39.3
Sed0013728 Sechium edule HOM05D001099 ORTHO05D000958 6.0e-07 58.9 90 37.8
unitig_736.g22948 Utricularia gibba HOM05D001099 ORTHO05D000958 6.0e-07 58.9 84 42.9
CSS0016514 Camellia sinensis var. sinensis HOM05D001099 ORTHO05D000958 7.8e-07 58.5 90 40.0
CsaV3_3G002770 Cucumis sativus L. HOM05D001099 ORTHO05D000958 7.8e-07 58.5 90 38.9
Eucgr.D02073 Eucalyptus grandis HOM05D001099 ORTHO05D000958 7.8e-07 58.5 92 38.0
Migut.F00478 Erythranthe guttata HOM05D001099 ORTHO05D000958 1.0e-06 58.2 116 31.0
Prupe.5G071200 Prunus persica HOM05D001099 ORTHO05D000958 1.0e-06 58.2 90 35.6
TWI23G0452 Tripterygium wilfordii HOM05D001099 ORTHO05D000958 1.0e-06 58.2 90 38.9
vmacro06798 Vaccinium macrocarpon HOM05D001099 ORTHO05D000958 1.0e-06 58.2 122 35.2
Atru.chr1.726 Acer truncatum HOM05D001099 ORTHO05D000958 1.3e-06 57.8 91 37.4
ClCG10G002740 Citrullus lanatus HOM05D001099 ORTHO05D000958 1.3e-06 57.8 90 37.8
Duzib205G0330 Durio zibethinus HOM05D001099 ORTHO05D000958 1.3e-06 57.8 84 40.5
Gohir.A08G170900 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.3e-06 57.8 90 37.8
Rhsim07G0020900 Rhododendron simsii HOM05D001099 ORTHO05D000958 1.3e-06 57.8 90 35.6
Thecc.03G252700 Theobroma cacao HOM05D001099 ORTHO05D000958 1.3e-06 57.8 97 35.1
A03p16190 Brassica napus HOM05D001099 ORTHO05D000958 1.7e-06 57.4 122 31.1
CiPaw.12G109200 Carya illinoinensis HOM05D001099 ORTHO05D000958 1.7e-06 57.4 90 37.8
ClCG04G005380 Citrullus lanatus HOM05D001099 ORTHO05D000958 1.7e-06 57.4 90 37.8
Gohir.A12G198400 Gossypium hirsutum HOM05D001099 ORTHO05D000958 1.7e-06 57.4 83 37.3
RcHm_v2.0_Chr7g0203041 Rosa chinensis HOM05D001099 ORTHO05D000958 1.7e-06 57.4 90 37.8
BraA03t10910Z Brassica rapa HOM05D001099 ORTHO05D000958 2.3e-06 57.0 123 30.9
Ciclev10006241m.g Citrus clementina HOM05D001099 ORTHO05D000958 2.3e-06 57.0 90 38.9
Glyma.12G013100 Glycine max HOM05D001099 ORTHO05D000958 2.3e-06 57.0 90 38.9
MD06G1060300 Malus domestica HOM05D001099 ORTHO05D000958 2.3e-06 57.0 90 34.4
Nn1g01033 Nelumbo nucifera HOM05D001099 ORTHO05D000958 2.3e-06 57.0 90 36.7
Oeu035950.1 Olea europaea HOM05D001099 ORTHO05D000958 2.3e-06 57.0 84 39.3
PGR042G2034 Punica granatum HOM05D001099 ORTHO05D000958 2.3e-06 57.0 91 39.6
Atru.chr9.1326 Acer truncatum HOM05D001099 ORTHO05D000958 3.0e-06 56.6 90 36.7
BcaB08g35500 Brassica carinata HOM05D001099 ORTHO05D000958 3.0e-06 56.6 153 30.7
Dinv28574 Davidia involucrata HOM05D001099 ORTHO05D000958 3.0e-06 56.6 90 37.8
Manes.06G134700 Manihot esculenta HOM05D001099 ORTHO05D000958 3.0e-06 56.6 90 37.8
Psat4g136720 Pisum sativum HOM05D001099 ORTHO05D000958 3.0e-06 56.6 92 37.0
CAN.G1367.2 Capsicum annuum HOM05D001099 ORTHO05D000958 5.0e-06 55.8 90 36.7
Haze_07927 Corylus avellana HOM05D001099 ORTHO05D000958 5.0e-06 55.8 86 37.2
Nn6g33979 Nelumbo nucifera HOM05D001099 ORTHO05D000958 5.0e-06 55.8 90 36.7
Potri.003G076000 Populus trichocarpa HOM05D001099 ORTHO05D000958 5.0e-06 55.8 128 30.5
Actinidia14437 Actinidia chinensis HOM05D001099 ORTHO05D000958 6.6e-06 55.5 90 35.6
Cpa.g.sc3.323 Carica papaya HOM05D001099 ORTHO05D000958 6.6e-06 55.5 88 38.6
Cfa012707 Carpinus fangiana HOM05D001099 ORTHO05D000958 6.6e-06 55.5 86 37.2
Hma1.2p1_1640F.1_g295060 Hydrangea macrophylla HOM05D001099 ORTHO05D000958 6.6e-06 55.5 120 33.3
Potri.003G109200 Populus trichocarpa HOM05D001099 ORTHO05D000958 6.6e-06 55.5 90 36.7
FAN04G1733 Fragaria x ananassa HOM05D001099 ORTHO05D000958 8.6e-06 55.1 90 37.8


User provided reference genes

Program Settings