Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0098501 Rosa chinensis HOM05D004525 ORTHO05D005295 1.8e-34 148.7 74 100.0
RcHm_v2.0_Chr7g0187021 Rosa chinensis HOM05D004525 ORTHO05D005295 6.9e-10 67.0 35 88.6
CARHR212640 Cardamine hirsuta HOM05D004525 ORTHO05D005295 4.2e-07 57.8 99 40.4
Duzib205G1187 Durio zibethinus HOM05D004525 ORTHO05D005295 9.3e-07 56.6 98 39.8
Prupe.2G307200 Prunus persica HOM05D004525 ORTHO05D005295 9.3e-07 56.6 87 41.4
Duzib068G1021 Durio zibethinus HOM05D004525 ORTHO05D005295 1.2e-06 56.2 88 40.9
Cfa006748 Carpinus fangiana HOM05D004525 ORTHO05D005295 1.6e-06 55.8 89 40.4
Haze_04010 Corylus avellana HOM05D004525 ORTHO05D005295 1.6e-06 55.8 89 40.4
Peaxi162Scf01444g00013 Petunia axillaris HOM05D004525 ORTHO05D005295 1.6e-06 55.8 67 46.3
Thecc.03G220900 Theobroma cacao HOM05D004525 ORTHO05D005295 1.6e-06 55.8 89 42.7
FvH4_4g11450 Fragaria vesca HOM05D004525 ORTHO05D005295 2.1e-06 55.5 86 41.9
FAN07G0034 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.1e-06 55.5 86 41.9
FAN22G0758 Fragaria x ananassa HOM05D004525 ORTHO05D005295 2.1e-06 55.5 86 41.9
Prupe.5G130000 Prunus persica HOM05D004525 ORTHO05D005295 2.1e-06 55.5 87 40.2
RcHm_v2.0_Chr1g0332661 Rosa chinensis HOM05D004525 ORTHO05D005295 2.1e-06 55.5 87 41.4
MD06G1119500 Malus domestica HOM05D004525 ORTHO05D005295 2.7e-06 55.1 87 40.2
MD14G1136300 Malus domestica HOM05D004525 ORTHO05D005295 2.7e-06 55.1 87 40.2
HanXRQChr17g0534221 Helianthus annuus HOM05D004525 ORTHO05D005295 4.6e-06 54.3 99 37.4
Sabra01G0060700 Salix brachista HOM05D004525 ORTHO05D005295 4.6e-06 54.3 86 40.7
Gohir.A12G240200 Gossypium hirsutum HOM05D004525 ORTHO05D005295 7.9e-06 53.5 88 39.8


User provided reference genes

Program Settings