Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0096901 Rosa chinensis HOM05D004986 ORTHO05D005898 2.7e-236 821.6 415 100.0
FvH4_1g10130 Fragaria vesca HOM05D004986 ORTHO05D005898 7.6e-215 750.4 415 91.3
FAN23G1121 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.9e-214 748.4 415 91.1
FAN23G2177 Fragaria x ananassa HOM05D004986 ORTHO05D005898 9.3e-213 743.4 415 90.8
FAN19G1207 Fragaria x ananassa HOM05D004986 ORTHO05D005898 2.1e-212 742.3 415 90.6
FAN26G2552 Fragaria x ananassa HOM05D004986 ORTHO05D005898 4.3e-210 734.6 415 88.9
FAN28G2129 Fragaria x ananassa HOM05D004986 ORTHO05D005898 4.3e-210 734.6 415 88.9
Prupe.7G185600 Prunus persica HOM05D004986 ORTHO05D005898 5.3e-176 621.3 413 77.7
MD15G1228500 Malus domestica HOM05D004986 ORTHO05D005898 8.0e-164 580.9 415 73.0
QL11p035166 Quercus lobata HOM05D004986 ORTHO05D005898 5.7e-146 521.5 409 66.5
Dinv28304 Davidia involucrata HOM05D004986 ORTHO05D005898 1.5e-141 506.9 402 65.2
Manes.02G115500 Manihot esculenta HOM05D004986 ORTHO05D005898 1.6e-140 503.4 406 63.3
Cfa007104 Carpinus fangiana HOM05D004986 ORTHO05D005898 2.1e-140 503.1 412 63.3
Atru.chr10.1816 Acer truncatum HOM05D004986 ORTHO05D005898 4.7e-140 501.9 405 64.7
Atru.chr10.1831 Acer truncatum HOM05D004986 ORTHO05D005898 4.0e-139 498.8 406 64.8
GSVIVG01022308001 Vitis vinifera HOM05D004986 ORTHO05D005898 1.3e-137 493.8 408 63.2
TWI53G0851 Tripterygium wilfordii HOM05D004986 ORTHO05D005898 1.4e-136 490.3 410 62.9
Manes.01G157000 Manihot esculenta HOM05D004986 ORTHO05D005898 2.4e-136 489.6 404 62.1
Lj3g0020964 Lotus japonicus HOM05D004986 ORTHO05D005898 1.0e-134 484.2 410 60.0
Hma1.2p1_0085F.1_g044450 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 1.7e-134 483.4 402 63.4
CSS0007723 Camellia sinensis var. sinensis HOM05D004986 ORTHO05D005898 2.5e-133 479.6 410 61.2
PGR119G1257 Punica granatum HOM05D004986 ORTHO05D005898 4.7e-132 475.3 415 60.0
Actinidia32993 Actinidia chinensis HOM05D004986 ORTHO05D005898 6.2e-132 474.9 405 61.2
Cc07_g12070 Coffea canephora HOM05D004986 ORTHO05D005898 1.4e-131 473.8 402 60.4
MSTRG.17107 Avicennia marina HOM05D004986 ORTHO05D005898 1.8e-131 473.4 404 60.9
Actinidia22885 Actinidia chinensis HOM05D004986 ORTHO05D005898 2.3e-131 473.0 405 61.0
CANSAT21G0416 Cannabis sativa HOM05D004986 ORTHO05D005898 2.3e-131 473.0 406 61.8
SalBow5G3763 Salvia bowleyana HOM05D004986 ORTHO05D005898 5.2e-131 471.9 408 60.8
Migut.B01487 Erythranthe guttata HOM05D004986 ORTHO05D005898 6.8e-131 471.5 406 60.3
Haze_03636 Corylus avellana HOM05D004986 ORTHO05D005898 1.5e-130 470.3 454 56.6
Lalb_Chr05g0214931 Lupinus albus HOM05D004986 ORTHO05D005898 2.6e-130 469.5 413 59.3
Medtr8g073110 Medicago truncatula HOM05D004986 ORTHO05D005898 5.8e-130 468.4 412 58.3
CiPaw.07G000800 Carya illinoinensis HOM05D004986 ORTHO05D005898 7.5e-130 468.0 402 61.2
Ca_02840_v3 Cicer arietinum L. HOM05D004986 ORTHO05D005898 7.5e-130 468.0 409 59.4
Ciclev10025602m.g Citrus clementina HOM05D004986 ORTHO05D005898 9.8e-130 467.6 405 61.0
Cpa.g.sc91.49 Carica papaya HOM05D004986 ORTHO05D005898 3.7e-129 465.7 417 60.4
Psat4g105800 Pisum sativum HOM05D004986 ORTHO05D005898 4.9e-129 465.3 408 59.3
DCAR_024399 Daucus carota HOM05D004986 ORTHO05D005898 6.4e-129 464.9 405 60.5
Rhsim10G0191900 Rhododendron simsii HOM05D004986 ORTHO05D005898 1.1e-128 464.2 411 60.3
Thecc.01G002600 Theobroma cacao HOM05D004986 ORTHO05D005898 5.4e-128 461.8 404 59.7
Oeu002901.1 Olea europaea HOM05D004986 ORTHO05D005898 6.6e-126 454.9 408 59.1
Sed0027663 Sechium edule HOM05D004986 ORTHO05D005898 1.1e-125 454.1 410 59.5
Phvul.010G020700 Phaseolus vulgaris HOM05D004986 ORTHO05D005898 1.2e-124 450.7 406 57.4
Carub.0008s2856 Capsella rubella HOM05D004986 ORTHO05D005898 2.8e-124 449.5 406 58.4
ClCG04G005010 Citrullus lanatus HOM05D004986 ORTHO05D005898 4.7e-124 448.7 406 58.1
TAR628G0962 Trochodendron aralioides HOM05D004986 ORTHO05D005898 4.7e-124 448.7 405 58.5
AT5G65960 Arabidopsis thaliana HOM05D004986 ORTHO05D005898 6.2e-124 448.4 405 58.3
Duzib106G1274 Durio zibethinus HOM05D004986 ORTHO05D005898 6.2e-124 448.4 406 57.9
arahy.Tifrunner.gnm1.ann1.H550X0 Arachis hypogaea HOM05D004986 ORTHO05D005898 1.8e-123 446.8 409 56.7
Glyma.09G196600 Glycine max HOM05D004986 ORTHO05D005898 1.8e-123 446.8 406 56.7
Hund21384 Selenicereus undatus HOM05D004986 ORTHO05D005898 1.8e-123 446.8 412 58.5
AL8G45680 Arabidopsis lyrata HOM05D004986 ORTHO05D005898 5.2e-123 445.3 408 57.8
CsaV3_4G027660 Cucumis sativus L. HOM05D004986 ORTHO05D005898 5.2e-123 445.3 417 57.8
Solyc03g032050.4 Solanum lycopersicum HOM05D004986 ORTHO05D005898 6.8e-123 444.9 404 59.9
Nitab4.5_0004269g0070 Nicotiana tabacum HOM05D004986 ORTHO05D005898 8.9e-123 444.5 400 58.5
Nn5g31026 Nelumbo nucifera HOM05D004986 ORTHO05D005898 1.5e-122 443.7 460 53.3
Sopen03g005900 Solanum pennellii HOM05D004986 ORTHO05D005898 1.5e-122 443.7 404 60.9
MELO3C026343.2 Cucumis melo HOM05D004986 ORTHO05D005898 2.0e-122 443.4 413 58.1
PSO170G5246 Papaver somniferum HOM05D004986 ORTHO05D005898 2.0e-122 443.4 417 55.9
PGSC0003DMG400018667 Solanum tuberosum HOM05D004986 ORTHO05D005898 2.0e-122 443.4 405 60.7
Glyma.16G112300 Glycine max HOM05D004986 ORTHO05D005898 5.8e-122 441.8 406 56.7
Gorai.005G068600 Gossypium raimondii HOM05D004986 ORTHO05D005898 5.8e-122 441.8 403 57.6
Aqoxy6G01559 Aquilegia oxysepala HOM05D004986 ORTHO05D005898 3.7e-121 439.1 404 55.9
VMungo0331G1669 Vigna mungo HOM05D004986 ORTHO05D005898 4.9e-121 438.7 406 55.9
Gohir.D03G000700 Gossypium hirsutum HOM05D004986 ORTHO05D005898 6.4e-121 438.3 404 56.9
Nitab4.5_0000495g0010 Nicotiana tabacum HOM05D004986 ORTHO05D005898 6.4e-121 438.3 404 57.9
Gohir.A02G055800 Gossypium hirsutum HOM05D004986 ORTHO05D005898 8.3e-121 438.0 402 57.2
HanXRQChr10g0316221 Helianthus annuus HOM05D004986 ORTHO05D005898 1.1e-120 437.6 403 57.8
Eucgr.I02210 Eucalyptus grandis HOM05D004986 ORTHO05D005898 1.4e-120 437.2 413 56.9
Gohir.D02G061000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 2.4e-120 436.4 403 57.1
Peaxi162Scf00920g00114 Petunia axillaris HOM05D004986 ORTHO05D005898 2.4e-120 436.4 425 55.8
Lj2C503G0 Lonicera japonica HOM05D004986 ORTHO05D005898 5.4e-120 435.3 391 59.3
Sp2g30730 Schrenkiella parvula HOM05D004986 ORTHO05D005898 7.1e-120 434.9 408 57.8
Gorai.003G001100 Gossypium raimondii HOM05D004986 ORTHO05D005898 4.6e-119 432.2 404 56.4
TAR381G0383 Trochodendron aralioides HOM05D004986 ORTHO05D005898 2.3e-118 429.9 405 57.3
Thhalv10004346m.g Eutrema salsugineum HOM05D004986 ORTHO05D005898 3.9e-118 429.1 408 56.4
Aa31LG1G14460 Aethionema arabicum HOM05D004986 ORTHO05D005898 1.5e-117 427.2 403 57.1
CAN.G647.4 Capsicum annuum HOM05D004986 ORTHO05D005898 1.5e-117 427.2 400 58.2
ECA240G4103 Erigeron canadensis HOM05D004986 ORTHO05D005898 7.3e-117 424.9 405 58.3
Gohir.A02G179000 Gossypium hirsutum HOM05D004986 ORTHO05D005898 7.3e-117 424.9 414 55.1
THA.LOC104826450 Tarenaya hassleriana HOM05D004986 ORTHO05D005898 4.7e-116 422.2 405 57.3
vmacro20612 Vaccinium macrocarpon HOM05D004986 ORTHO05D005898 6.2e-116 421.8 407 57.0
arahy.Tifrunner.gnm1.ann1.UZ6AL0 Arachis hypogaea HOM05D004986 ORTHO05D005898 8.1e-116 421.4 440 52.5
CARHR257450 Cardamine hirsuta HOM05D004986 ORTHO05D005898 1.4e-112 410.6 414 55.8
EL10Ac3g05234 Beta vulgaris HOM05D004986 ORTHO05D005898 3.2e-112 409.5 412 54.4
Lsat_1_v5_gn_2_73561 Lactuca sativa HOM05D004986 ORTHO05D005898 5.4e-112 408.7 412 55.6
Ah.10g026930 Amaranthus hybridus HOM05D004986 ORTHO05D005898 1.6e-111 407.1 412 52.7
SGA_v2.0_scaffold52G19267 Striga asiatica HOM05D004986 ORTHO05D005898 6.0e-111 405.2 381 57.7
SGA_v2.0_scaffold34G13577 Striga asiatica HOM05D004986 ORTHO05D005898 7.8e-111 404.8 432 51.4
A09p10240 Brassica napus HOM05D004986 ORTHO05D005898 1.0e-110 404.4 417 55.6
Sabra02G0136200 Salix brachista HOM05D004986 ORTHO05D005898 2.3e-110 403.3 413 54.5
unitig_26.g8860 Utricularia gibba HOM05D004986 ORTHO05D005898 1.2e-108 397.5 400 54.2
Os04g0584800 Oryza sativa ssp. japonica HOM05D004986 ORTHO05D005898 5.2e-107 392.1 428 49.8
Zm00001eb072790 Zea mays HOM05D004986 ORTHO05D005898 1.2e-106 391.0 413 49.2
C09p12150 Brassica napus HOM05D004986 ORTHO05D005898 6.4e-105 385.2 414 53.6
BcaC04g23101 Brassica carinata HOM05D004986 ORTHO05D005898 3.2e-104 382.9 414 53.4
BolC9t54105H Brassica oleracea HOM05D004986 ORTHO05D005898 3.2e-104 382.9 414 53.4
AUR62006055 Chenopodium quinoa HOM05D004986 ORTHO05D005898 5.4e-104 382.1 411 52.6
BraA09t36669Z Brassica rapa HOM05D004986 ORTHO05D005898 2.1e-103 380.2 418 53.3
BcaB04g20132 Brassica carinata HOM05D004986 ORTHO05D005898 4.6e-103 379.0 422 52.6
HPP92_007280 Vanilla planifolia HOM05D004986 ORTHO05D005898 4.3e-101 372.5 409 48.7
Hma1.2p1_0085F.1_g044460 Hydrangea macrophylla HOM05D004986 ORTHO05D005898 4.8e-100 369.0 298 62.1
Potri.002G177100 Populus trichocarpa HOM05D004986 ORTHO05D005898 3.8e-97 359.4 326 59.2
MBI13_g20494_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 9.3e-96 354.8 476 45.2
Psat0s3210g0040 Pisum sativum HOM05D004986 ORTHO05D005898 1.3e-94 350.9 291 59.5
Sc05g0009010 Simmondsia chinensis HOM05D004986 ORTHO05D005898 1.3e-92 344.4 346 54.3
ATR0807G113 Amborella trichopoda HOM05D004986 ORTHO05D005898 4.9e-89 332.4 470 43.0
CARHR281810 Cardamine hirsuta HOM05D004986 ORTHO05D005898 4.2e-88 329.3 271 60.9
COL.COLO4_34271 Corchorus olitorius HOM05D004986 ORTHO05D005898 7.1e-88 328.6 409 47.7
Potri.007G064500 Populus trichocarpa HOM05D004986 ORTHO05D005898 1.6e-84 317.4 386 47.9
SEGI_13138 Sequoiadendron giganteum HOM05D004986 ORTHO05D005898 3.5e-79 299.7 411 41.4
Atru.chr3.37 Acer truncatum HOM05D004986 ORTHO05D005898 5.1e-78 295.8 415 44.8
Oeu037412.2 Olea europaea HOM05D004986 ORTHO05D005898 7.4e-77 292.0 423 44.7
Mapoly0024s0125 Marchantia polymorpha HOM05D004986 ORTHO05D005898 1.6e-76 290.8 449 41.6
Dinv40206 Davidia involucrata HOM05D004986 ORTHO05D005898 6.3e-76 288.9 254 61.0
CDE04G0629 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 1.0e-73 281.6 410 42.7
Pp3c17_5460 Physcomitrium patens HOM05D004986 ORTHO05D005898 2.3e-70 270.4 441 38.5
Lj4g0017944 Lotus japonicus HOM05D004986 ORTHO05D005898 1.5e-69 267.7 385 42.9
MD02G1112100 Malus domestica HOM05D004986 ORTHO05D005898 2.2e-68 263.8 166 71.1
AagrBONN_evm.TU.Sc2ySwM_362.836 Anthoceros agrestis HOM05D004986 ORTHO05D005898 4.8e-68 262.7 465 37.2
SMO147G0325 Selaginella moellendorffii HOM05D004986 ORTHO05D005898 5.9e-66 255.8 414 40.6
HanXRQChr13g0388311 Helianthus annuus HOM05D004986 ORTHO05D005898 1.1e-59 235.0 228 57.0
CDE07G1230 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 5.3e-59 232.6 299 41.8
MD02G1109300 Malus domestica HOM05D004986 ORTHO05D005898 9.4e-56 221.9 177 63.3
Sed0024004 Sechium edule HOM05D004986 ORTHO05D005898 5.2e-54 216.1 323 43.7
MD02G1113000 Malus domestica HOM05D004986 ORTHO05D005898 7.4e-53 212.2 155 65.8
HanXRQChr13g0388301 Helianthus annuus HOM05D004986 ORTHO05D005898 2.0e-50 204.1 181 56.4
AUR62035574 Chenopodium quinoa HOM05D004986 ORTHO05D005898 3.7e-44 183.3 178 50.0
MD02G1113100 Malus domestica HOM05D004986 ORTHO05D005898 1.0e-41 175.3 188 58.5
Atru.chr3.33 Acer truncatum HOM05D004986 ORTHO05D005898 2.2e-41 174.1 110 72.7
SGA_v2.0_scaffold578G53029 Striga asiatica HOM05D004986 ORTHO05D005898 2.1e-39 167.5 202 49.5
Atru.chr3.32 Acer truncatum HOM05D004986 ORTHO05D005898 2.9e-33 147.1 184 52.7
CBR_g24177 Chara braunii HOM05D004986 ORTHO05D005898 2.8e-31 140.6 266 33.8
MD02G1112600 Malus domestica HOM05D004986 ORTHO05D005898 1.8e-30 137.9 155 49.7
TPR.G33051 Trifolium pratense HOM05D004986 ORTHO05D005898 4.5e-26 123.2 99 56.6
MBI15_g18235_MAGBIO Magnolia biondii HOM05D004986 ORTHO05D005898 2.0e-18 97.8 130 43.1
Zm00001eb338840 Zea mays HOM05D004986 ORTHO05D005898 1.0e-17 95.5 78 64.1
MD02G1112300 Malus domestica HOM05D004986 ORTHO05D005898 3.3e-16 90.5 97 49.5
Zm00001eb355160 Zea mays HOM05D004986 ORTHO05D005898 5.6e-16 89.7 128 45.3
arahy.Tifrunner.gnm1.ann1.06FJIN Arachis hypogaea HOM05D004986 ORTHO05D005898 1.4e-14 85.1 61 72.1
arahy.Tifrunner.gnm1.ann1.757MF4 Arachis hypogaea HOM05D004986 ORTHO05D005898 1.4e-14 85.1 61 72.1
CARHR281800 Cardamine hirsuta HOM05D004986 ORTHO05D005898 8.9e-14 82.4 52 76.9
arahy.Tifrunner.gnm1.ann1.864E1P Arachis hypogaea HOM05D004986 ORTHO05D005898 2.7e-10 70.9 111 41.4
arahy.Tifrunner.gnm1.ann1.GJAM3K Arachis hypogaea HOM05D004986 ORTHO05D005898 2.7e-10 70.9 111 41.4
CDE04G2304 Ceratophyllum demersum HOM05D004986 ORTHO05D005898 2.7e-10 70.9 165 35.8
MCO09G766 Micromonas commoda HOM05D004986 ORTHO05D005898 5.0e-09 66.6 258 24.0


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