Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0094621 Rosa chinensis HOM05D013248 ORTHO05D013876 4.9e-271 937.2 464 100.0
RcHm_v2.0_Chr3g0461191 Rosa chinensis HOM05D013248 ORTHO05D013876 1.1e-153 547.4 376 73.4
RcHm_v2.0_Chr1g0320121 Rosa chinensis HOM05D013248 ORTHO05D013876 8.4e-130 468.0 370 64.9
RcHm_v2.0_Chr1g0314411 Rosa chinensis HOM05D013248 ORTHO05D013876 1.3e-127 460.7 325 71.4
RcHm_v2.0_Chr1g0328081 Rosa chinensis HOM05D013248 ORTHO05D013876 1.3e-127 460.7 325 71.4
RcHm_v2.0_Chr4g0416881 Rosa chinensis HOM05D013248 ORTHO05D013876 3.3e-102 376.3 291 66.7
RcHm_v2.0_Chr2g0140201 Rosa chinensis HOM05D013248 ORTHO05D013876 3.2e-73 280.0 218 65.1
FvH4_5g00040 Fragaria vesca HOM05D013248 ORTHO05D000378 1.3e-16 92.0 298 26.2
FAN19G0046 Fragaria x ananassa HOM05D011317 ORTHO05D020640 1.6e-11 75.1 171 31.0
RcHm_v2.0_Chr1g0322801 Rosa chinensis HOM05D031301 ORTHO05D013876 2.1e-11 74.7 195 26.7
RcHm_v2.0_Chr3g0488791 Rosa chinensis HOM05D013248 ORTHO05D013876 3.0e-10 70.9 66 51.5
RcHm_v2.0_Chr4g0419581 Rosa chinensis HOM05D031301 ORTHO05D013876 1.5e-09 68.6 127 31.5
FvH4_4g15603 Fragaria vesca HOM05D013195 ORTHO05D020618 1.9e-09 68.2 172 29.1
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 3.3e-09 67.4 205 26.3
Oeu048080.1 Olea europaea HOM05D000784 ORTHO05D000116 4.3e-09 67.0 157 26.1
Oeu060033.1 Olea europaea HOM05D000784 ORTHO05D000116 9.6e-09 65.9 130 30.0
QL10p025857 Quercus lobata HOM05D009413 ORTHO05D000116 1.6e-08 65.1 194 26.8
Oeu025022.1 Olea europaea HOM05D000784 ORTHO05D000116 8.2e-08 62.8 128 30.5
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 1.8e-07 61.6 149 28.9
Oeu048101.1 Olea europaea HOM05D000784 ORTHO05D000116 4.0e-07 60.5 217 24.4
QL02p091007 Quercus lobata HOM05D009413 ORTHO05D000116 4.0e-07 60.5 152 27.6
Oeu004897.1 Olea europaea HOM05D000784 ORTHO05D000116 5.3e-07 60.1 154 25.3
Oeu008561.1 Olea europaea HOM05D000784 ORTHO05D000116 5.3e-07 60.1 134 27.6
Oeu021315.1 Olea europaea HOM05D000784 ORTHO05D000116 9.0e-07 59.3 177 24.9
Zm00001eb375220 Zea mays HOM05D013248 ORTHO05D001543 9.0e-07 59.3 79 36.7
QL04p042823 Quercus lobata HOM05D009413 ORTHO05D000116 1.2e-06 58.9 202 25.2
Oeu021534.1 Olea europaea HOM05D000784 ORTHO05D000116 1.5e-06 58.5 158 24.7
Oeu020642.1 Olea europaea HOM05D000784 ORTHO05D000116 2.0e-06 58.2 158 25.3
Oeu018805.1 Olea europaea HOM05D000784 ORTHO05D000116 2.6e-06 57.8 122 27.9
QL10p046964 Quercus lobata HOM05D009413 ORTHO05D000116 2.6e-06 57.8 152 27.0
QL06p047151 Quercus lobata HOM05D009413 ORTHO05D000116 3.4e-06 57.4 152 27.0
TWI14G0077 Tripterygium wilfordii HOM05D015010 ORTHO05D000116 3.4e-06 57.4 192 27.1
Oeu023276.1 Olea europaea HOM05D000784 ORTHO05D000116 4.5e-06 57.0 107 29.0
SalBow5G1224 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.5e-06 57.0 166 31.3
SalBow5G2537 Salvia bowleyana HOM05D010617 ORTHO05D011805 4.5e-06 57.0 166 31.3
Oeu001961.1 Olea europaea HOM05D000784 ORTHO05D000116 5.8e-06 56.6 180 21.7
Oeu061108.1 Olea europaea HOM05D000784 ORTHO05D000116 7.6e-06 56.2 121 26.4
RcHm_v2.0_Chr2g0084191 Rosa chinensis HOM05D031301 ORTHO05D010628 1.0e-05 55.8 172 25.6


User provided reference genes

Program Settings