Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0092801 Rosa chinensis HOM05D000325 ORTHO05D000583 6.7e-206 720.7 432 100.0
RcHm_v2.0_Chr2g0092861 Rosa chinensis HOM05D000325 ORTHO05D000583 3.1e-187 658.7 430 92.3
FvH4_1g06910 Fragaria vesca HOM05D000325 ORTHO05D000583 6.2e-151 538.1 428 81.1
FAN26G2118 Fragaria x ananassa HOM05D000325 ORTHO05D000583 2.0e-149 533.1 428 80.1
FAN28G2639 Fragaria x ananassa HOM05D000325 ORTHO05D000583 1.7e-148 530.0 428 80.1
FAN19G0812 Fragaria x ananassa HOM05D000325 ORTHO05D000583 6.4e-148 528.1 428 80.1
FAN23G1144 Fragaria x ananassa HOM05D000325 ORTHO05D000583 1.9e-147 526.6 429 78.8
FAN26G1283 Fragaria x ananassa HOM05D000325 ORTHO05D000583 7.0e-147 524.6 429 79.5
Prupe.7G214200 Prunus persica HOM05D000325 ORTHO05D000583 5.9e-85 318.9 472 48.3
MD15G1202900 Malus domestica HOM05D000325 ORTHO05D000583 2.9e-76 290.0 460 45.7
MD02G1073500 Malus domestica HOM05D000325 ORTHO05D000583 2.9e-68 263.5 469 47.5
QL02p063344 Quercus lobata HOM05D000325 ORTHO05D000583 2.2e-23 114.4 496 33.1
Manes.16G104700 Manihot esculenta HOM05D000325 ORTHO05D000583 3.9e-20 103.6 440 30.0
Cfa003122 Carpinus fangiana HOM05D000325 ORTHO05D000583 6.2e-18 96.3 385 33.2
Haze_25880 Corylus avellana HOM05D000325 ORTHO05D000583 2.0e-16 91.3 425 31.5
Dinv42289 Davidia involucrata HOM05D000325 ORTHO05D000583 2.6e-16 90.9 201 34.8
Gorai.010G081100 Gossypium raimondii HOM05D000325 ORTHO05D000583 1.3e-15 88.6 250 34.4
Gohir.A07G009800 Gossypium hirsutum HOM05D000325 ORTHO05D000583 2.9e-15 87.4 344 30.8
Gohir.D07G010100 Gossypium hirsutum HOM05D000325 ORTHO05D000583 1.4e-14 85.1 308 30.2
Gohir.D06G069532 Gossypium hirsutum HOM05D000325 ORTHO05D000583 2.4e-14 84.3 250 34.0
Gorai.001G010500 Gossypium raimondii HOM05D000325 ORTHO05D000583 4.2e-14 83.6 308 28.9
Gohir.A06G070833 Gossypium hirsutum HOM05D000325 ORTHO05D000583 9.3e-14 82.4 386 28.2
Gohir.A06G070866 Gossypium hirsutum HOM05D000325 ORTHO05D000583 9.3e-14 82.4 386 28.2
Duzib150G0735 Durio zibethinus HOM05D000325 ORTHO05D000583 2.1e-13 81.3 290 39.0
Gorai.009G030200 Gossypium raimondii HOM05D000325 ORTHO05D000583 1.0e-12 79.0 363 30.0
TWI32G0874 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 3.9e-12 77.0 414 26.6
Gohir.D05G030000 Gossypium hirsutum HOM05D000325 ORTHO05D000583 5.1e-12 76.6 363 29.8
Duzib187G1615 Durio zibethinus HOM05D000325 ORTHO05D000583 1.1e-11 75.5 263 34.2
TAR626G1022 Trochodendron aralioides HOM05D000325 ORTHO05D000583 1.1e-11 75.5 414 25.8
CiPaw.04G152400 Carya illinoinensis HOM05D000325 ORTHO05D000583 1.5e-11 75.1 433 30.3
Gohir.A05G028400 Gossypium hirsutum HOM05D000325 ORTHO05D000583 2.5e-11 74.3 379 27.7
CiPaw.03G219200 Carya illinoinensis HOM05D000325 ORTHO05D000583 3.3e-11 73.9 313 31.6
Dinv36739 Davidia involucrata HOM05D000325 ORTHO05D000583 4.3e-11 73.6 381 26.5
Ciclev10010570m.g Citrus clementina HOM05D000325 ORTHO05D000583 1.3e-10 72.0 427 26.9
Potri.006G149800 Populus trichocarpa HOM05D000325 ORTHO05D000583 2.1e-10 71.2 472 28.4
TPR.G22817 Trifolium pratense HOM05D000325 ORTHO05D000583 2.1e-10 71.2 372 26.9
CSS0012843 Camellia sinensis var. sinensis HOM05D000325 ORTHO05D000583 4.8e-10 70.1 418 26.3
Lalb_Chr22g0349801 Lupinus albus HOM05D000325 ORTHO05D000583 4.8e-10 70.1 416 25.7
Thecc.09G093700 Theobroma cacao HOM05D000325 ORTHO05D000583 6.2e-10 69.7 281 30.6
CANSAT56G1943 Cannabis sativa HOM05D000325 ORTHO05D000583 1.4e-09 68.6 323 28.2
TWI34G1765 Tripterygium wilfordii HOM05D000325 ORTHO05D000583 2.4e-09 67.8 409 25.4
Medtr6g091690 Medicago truncatula HOM05D000325 ORTHO05D000583 5.3e-09 66.6 357 27.7
TAR383G0068 Trochodendron aralioides HOM05D000325 ORTHO05D000583 9.0e-09 65.9 418 23.7
Glyma.07G127800 Glycine max HOM05D000325 ORTHO05D000583 9.9e-08 62.4 426 26.1
Atru.chr7.1536 Acer truncatum HOM05D000325 ORTHO05D000583 1.3e-07 62.0 260 28.1
GSVIVG01015242001 Vitis vinifera HOM05D000325 ORTHO05D000583 4.2e-06 57.0 472 29.4
Glyma.01G004100 Glycine max HOM05D000325 ORTHO05D000583 7.1e-06 56.2 355 27.0
Nn6g35413 Nelumbo nucifera HOM05D000325 ORTHO05D000583 9.3e-06 55.8 373 27.1


User provided reference genes

Program Settings