Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0092441 Rosa chinensis HOM05D006447 ORTHO05D007938 3.9e-117 424.9 219 100.0
FvH4_1g06700 Fragaria vesca HOM05D006447 ORTHO05D007938 2.0e-113 412.5 219 96.3
FAN26G2507 Fragaria x ananassa HOM05D006447 ORTHO05D007938 2.6e-113 412.1 219 96.3
Prupe.7G215800 Prunus persica HOM05D006447 ORTHO05D007938 3.7e-104 381.7 216 88.9
MD15G1201700 Malus domestica HOM05D006447 ORTHO05D007938 1.9e-103 379.4 217 87.6
FAN19G0010 Fragaria x ananassa HOM05D006447 ORTHO05D007938 7.8e-102 374.0 219 90.0
Ciclev10009402m.g Citrus clementina HOM05D006447 ORTHO05D007938 5.1e-101 371.3 218 85.3
QL02p040054 Quercus lobata HOM05D006447 ORTHO05D007938 1.4e-98 363.2 218 84.4
Sabra18G0061100 Salix brachista HOM05D006447 ORTHO05D007938 1.4e-98 363.2 219 84.0
Lalb_Chr22g0349841 Lupinus albus HOM05D006447 ORTHO05D007938 3.1e-98 362.1 219 82.6
Cfa003143 Carpinus fangiana HOM05D006447 ORTHO05D007938 8.9e-98 360.5 219 84.5
CSS0014749 Camellia sinensis var. sinensis HOM05D006447 ORTHO05D007938 2.0e-97 359.4 219 84.9
Manes.03G029700 Manihot esculenta HOM05D006447 ORTHO05D007938 2.6e-97 359.0 219 84.0
Cpa.g.sc229.2 Carica papaya HOM05D006447 ORTHO05D007938 4.4e-97 358.2 218 83.5
Potri.018G069800 Populus trichocarpa HOM05D006447 ORTHO05D007938 7.6e-97 357.5 216 84.3
Sed0005705 Sechium edule HOM05D006447 ORTHO05D007938 1.7e-96 356.3 219 84.0
Gorai.001G010200 Gossypium raimondii HOM05D006447 ORTHO05D007938 8.4e-96 354.0 220 81.8
TAR626G0261 Trochodendron aralioides HOM05D006447 ORTHO05D007938 8.4e-96 354.0 219 83.6
Actinidia39754 Actinidia chinensis HOM05D006447 ORTHO05D007938 1.1e-95 353.6 219 82.2
Ca_16628_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 1.4e-95 353.2 219 80.4
Glyma.01G004700 Glycine max HOM05D006447 ORTHO05D007938 1.4e-95 353.2 219 80.4
Migut.K00568 Erythranthe guttata HOM05D006447 ORTHO05D007938 1.9e-95 352.8 218 80.3
TAR728G0001 Trochodendron aralioides HOM05D006447 ORTHO05D007938 1.9e-95 352.8 219 83.6
CsaV3_1G040040 Cucumis sativus L. HOM05D006447 ORTHO05D007938 2.4e-95 352.4 219 82.2
TAR626G0126 Trochodendron aralioides HOM05D006447 ORTHO05D007938 2.4e-95 352.4 219 83.1
Gohir.A07G009600 Gossypium hirsutum HOM05D006447 ORTHO05D007938 5.4e-95 351.3 220 81.4
CAN.G1241.6 Capsicum annuum HOM05D006447 ORTHO05D007938 9.2e-95 350.5 214 83.2
Peaxi162Scf00498g00029 Petunia axillaris HOM05D006447 ORTHO05D007938 1.6e-94 349.7 217 82.0
arahy.Tifrunner.gnm1.ann1.2E9KT7 Arachis hypogaea HOM05D006447 ORTHO05D007938 2.7e-94 349.0 247 73.7
arahy.Tifrunner.gnm1.ann1.D97E3U Arachis hypogaea HOM05D006447 ORTHO05D007938 2.7e-94 349.0 247 73.7
Sc18g0001690 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.5e-94 348.6 218 78.9
Sc18g0001740 Simmondsia chinensis HOM05D006447 ORTHO05D007938 3.5e-94 348.6 218 78.9
Nitab4.5_0000540g0030 Nicotiana tabacum HOM05D006447 ORTHO05D007938 1.7e-93 346.3 219 80.8
Eucgr.C00935 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.3e-93 345.9 208 83.2
Phvul.004G173200 Phaseolus vulgaris HOM05D006447 ORTHO05D007938 2.3e-93 345.9 220 78.2
HanXRQChr10g0319031 Helianthus annuus HOM05D006447 ORTHO05D007938 3.9e-93 345.1 213 81.2
Sopen12g003620 Solanum pennellii HOM05D006447 ORTHO05D007938 5.1e-93 344.7 218 80.3
Aqoxy7G01349 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 6.6e-93 344.4 207 83.1
THA.LOC104814578 Tarenaya hassleriana HOM05D006447 ORTHO05D007938 6.6e-93 344.4 218 79.8
DCAR_031970 Daucus carota HOM05D006447 ORTHO05D007938 1.5e-92 343.2 216 79.6
Medtr6g090585 Medicago truncatula HOM05D006447 ORTHO05D007938 1.9e-92 342.8 219 77.6
ECA234G4260 Erigeron canadensis HOM05D006447 ORTHO05D007938 3.3e-92 342.0 211 81.5
DCAR_024680 Daucus carota HOM05D006447 ORTHO05D007938 5.6e-92 341.3 215 79.5
SalBow1G2756 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.6e-92 341.3 216 81.0
SalBow1G3435 Salvia bowleyana HOM05D006447 ORTHO05D007938 5.6e-92 341.3 216 81.0
AUR62030454 Chenopodium quinoa HOM05D006447 ORTHO05D007938 1.6e-91 339.7 217 78.8
Lj2g0017011 Lotus japonicus HOM05D006447 ORTHO05D007938 1.6e-91 339.7 219 77.6
BraA03t14939Z Brassica rapa HOM05D006447 ORTHO05D007938 2.1e-91 339.3 215 80.9
Hund14295 Selenicereus undatus HOM05D006447 ORTHO05D007938 2.1e-91 339.3 226 77.9
TPR.G26948 Trifolium pratense HOM05D006447 ORTHO05D007938 2.8e-91 339.0 219 76.3
Thhalv10026148m.g Eutrema salsugineum HOM05D006447 ORTHO05D007938 4.7e-91 338.2 218 78.0
PSO063G5072 Papaver somniferum HOM05D006447 ORTHO05D007938 4.7e-91 338.2 208 82.2
CARHR236900 Cardamine hirsuta HOM05D006447 ORTHO05D007938 6.2e-91 337.8 218 78.4
AT4G29170 Arabidopsis thaliana HOM05D006447 ORTHO05D007938 8.1e-91 337.4 215 80.0
Nn8g38980 Nelumbo nucifera HOM05D006447 ORTHO05D007938 8.1e-91 337.4 220 78.6
PGR142G0783 Punica granatum HOM05D006447 ORTHO05D007938 8.1e-91 337.4 208 83.7
Eucgr.C00941 Eucalyptus grandis HOM05D006447 ORTHO05D007938 1.1e-90 337.0 210 81.9
Lsat_1_v5_gn_5_146261 Lactuca sativa HOM05D006447 ORTHO05D007938 1.1e-90 337.0 218 78.4
Aa31LG2G21480 Aethionema arabicum HOM05D006447 ORTHO05D007938 3.1e-90 335.5 217 77.0
BcaNung00456 Brassica carinata HOM05D006447 ORTHO05D007938 3.1e-90 335.5 215 80.0
A03p58760 Brassica napus HOM05D006447 ORTHO05D007938 3.1e-90 335.5 214 80.4
BolC7t46152H Brassica oleracea HOM05D006447 ORTHO05D007938 3.1e-90 335.5 215 80.0
EL10Ac5g12560 Beta vulgaris HOM05D006447 ORTHO05D007938 6.8e-90 334.3 217 77.0
Haze_25859 Corylus avellana HOM05D006447 ORTHO05D007938 6.8e-90 334.3 219 80.8
VMungo0464G1544 Vigna mungo HOM05D006447 ORTHO05D007938 8.9e-90 334.0 220 75.5
PGSC0003DMG400000348 Solanum tuberosum HOM05D006447 ORTHO05D007938 1.2e-89 333.6 241 73.4
FAN26G1122 Fragaria x ananassa HOM05D006447 ORTHO05D007938 1.5e-89 333.2 219 83.1
Lj7A670G54 Lonicera japonica HOM05D006447 ORTHO05D007938 1.5e-89 333.2 217 79.7
Carub.0007s1142 Capsella rubella HOM05D006447 ORTHO05D007938 2.0e-89 332.8 215 78.1
PSO832G0153 Papaver somniferum HOM05D006447 ORTHO05D007938 2.6e-89 332.4 208 80.8
Nitab4.5_0003781g0070 Nicotiana tabacum HOM05D006447 ORTHO05D007938 3.4e-89 332.0 210 79.5
SGA_v2.0_scaffold210G42077 Striga asiatica HOM05D006447 ORTHO05D007938 7.6e-89 330.9 219 75.8
unitig_749.g13512 Utricularia gibba HOM05D006447 ORTHO05D007938 1.7e-88 329.7 211 77.7
AL7G23270 Arabidopsis lyrata HOM05D006447 ORTHO05D007938 3.8e-88 328.6 215 77.7
Ca_25608_v3 Cicer arietinum L. HOM05D006447 ORTHO05D007938 8.4e-88 327.4 204 78.9
Os09g0280600 Oryza sativa ssp. japonica HOM05D006447 ORTHO05D007938 1.4e-87 326.6 207 80.2
Thecc.09G095600 Theobroma cacao HOM05D006447 ORTHO05D007938 1.4e-87 326.6 219 79.5
GSVIVG01015263001 Vitis vinifera HOM05D006447 ORTHO05D007938 4.2e-87 325.1 203 80.8
Rhsim05G0029800 Rhododendron simsii HOM05D006447 ORTHO05D007938 1.6e-86 323.2 209 79.9
Oeu057342.1 Olea europaea HOM05D006447 ORTHO05D007938 4.6e-86 321.6 204 79.4
C07p56700 Brassica napus HOM05D006447 ORTHO05D007938 6.0e-86 321.2 241 71.4
TWI34G0617 Tripterygium wilfordii HOM05D006447 ORTHO05D007938 1.0e-85 320.5 219 76.7
ClCG03G015910 Citrullus lanatus HOM05D006447 ORTHO05D007938 9.6e-84 313.9 196 82.1
MBI01_g35891_MAGBIO Magnolia biondii HOM05D006447 ORTHO05D007938 1.6e-83 313.2 206 77.7
BcaNung00458 Brassica carinata HOM05D006447 ORTHO05D007938 2.8e-83 312.4 200 79.5
Cc06_g10870 Coffea canephora HOM05D006447 ORTHO05D007938 8.1e-83 310.8 196 78.6
ATR0705G171 Amborella trichopoda HOM05D006447 ORTHO05D007938 1.8e-82 309.7 207 75.4
Eucgr.L02391 Eucalyptus grandis HOM05D006447 ORTHO05D007938 2.4e-82 309.3 196 79.6
AUR62010457 Chenopodium quinoa HOM05D006447 ORTHO05D007938 9.3e-79 297.4 183 80.3
SMO133G0018 Selaginella moellendorffii HOM05D006447 ORTHO05D007938 5.6e-76 288.1 206 68.4
Pp3c5_5010 Physcomitrium patens HOM05D006447 ORTHO05D007938 4.8e-75 285.0 207 68.6
HPP92_025693 Vanilla planifolia HOM05D006447 ORTHO05D007938 4.8e-75 285.0 197 76.6
Zm00001eb094560 Zea mays HOM05D006447 ORTHO05D007938 1.2e-73 280.4 214 68.2
Gohir.D07G009900 Gossypium hirsutum HOM05D006447 ORTHO05D007938 7.6e-73 277.7 170 85.3
AagrBONN_evm.TU.Sc2ySwM_344.5016 Anthoceros agrestis HOM05D006447 ORTHO05D007938 1.4e-71 273.5 207 67.1
Mapoly0019s0059 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.4e-71 272.7 207 67.1
Psat1g048880 Pisum sativum HOM05D006447 ORTHO05D007938 2.7e-70 269.2 175 80.0
Atru.BG.7.p Acer truncatum HOM05D006447 ORTHO05D007938 3.0e-69 265.8 202 72.3
COL.COLO4_18262 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.8e-66 256.5 154 88.3
Dinv42281 Davidia involucrata HOM05D006447 ORTHO05D007938 6.9e-66 254.6 230 63.0
SHI02797 Sapria himalayana HOM05D006447 ORTHO05D007938 9.0e-66 254.2 173 76.3
vmacro10828 Vaccinium macrocarpon HOM05D006447 ORTHO05D007938 3.9e-61 238.8 217 61.3
CAN.G3484.1 Capsicum annuum HOM05D006447 ORTHO05D007938 1.2e-57 227.3 138 87.0
CiPaw.04G153800 Carya illinoinensis HOM05D006447 ORTHO05D007938 1.2e-57 227.3 139 86.3
PGR142G2135 Punica granatum HOM05D006447 ORTHO05D007938 2.5e-55 219.5 141 78.7
Aqoxy2G00494 Aquilegia oxysepala HOM05D006447 ORTHO05D007938 1.2e-54 217.2 183 65.0
CAN.G1241.4 Capsicum annuum HOM05D006447 ORTHO05D007938 8.5e-48 194.5 120 83.3
Sp7g27093 Schrenkiella parvula HOM05D006447 ORTHO05D007938 8.8e-45 184.5 113 83.2
CDE05G0869 Ceratophyllum demersum HOM05D006447 ORTHO05D007938 2.4e-42 176.4 138 65.9
CAN.G4329.1 Capsicum annuum HOM05D006447 ORTHO05D007938 3.2e-39 166.0 108 79.6
MELO3C015434.2 Cucumis melo HOM05D006447 ORTHO05D007938 3.2e-39 166.0 218 49.5
Mapoly0063s0089 Marchantia polymorpha HOM05D006447 ORTHO05D007938 2.2e-35 153.3 115 69.6
Sp7g27097 Schrenkiella parvula HOM05D006447 ORTHO05D007938 1.6e-33 147.1 96 71.9
PRCOL_00003806 Prasinoderma coloniale HOM05D006447 ORTHO05D007938 3.8e-32 142.5 212 41.0
MCO03G125 Micromonas commoda HOM05D006447 ORTHO05D007938 4.2e-31 139.0 204 36.8
Cre06.g278850 Chlamydomonas reinhardtii HOM05D006447 ORTHO05D007938 5.2e-29 132.1 197 37.1
C08p09440 Brassica napus HOM05D006447 ORTHO05D007938 6.5e-24 115.2 101 65.3
BolC8t47800H Brassica oleracea HOM05D006447 ORTHO05D007938 1.1e-23 114.4 101 64.4
HanXRQChr11g0335721 Helianthus annuus HOM05D006447 ORTHO05D007938 2.3e-21 106.7 81 70.4
Lsat_1_v5_gn_1_67520 Lactuca sativa HOM05D006447 ORTHO05D007938 1.6e-17 94.0 113 51.3
CBR_g8047 Chara braunii HOM05D006447 ORTHO05D007938 3.5e-17 92.8 71 56.3
COL.COLO4_18261 Corchorus olitorius HOM05D006447 ORTHO05D007938 1.1e-15 87.8 51 76.5
Hma1.2p1_0663F.1_g198600 Hydrangea macrophylla HOM05D006447 ORTHO05D007938 9.5e-07 58.2 50 66.0


User provided reference genes

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