Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0090961 Rosa chinensis HOM05D000007 ORTHO05D005026 1.3e-44 182.6 84 100.0
FvH4_1g04521 Fragaria vesca HOM05D000007 ORTHO05D005026 4.6e-18 94.4 103 50.5
FAN26G3325 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.1e-15 85.5 84 52.4
FvH4_1g04511 Fragaria vesca HOM05D000007 ORTHO05D005026 3.6e-15 84.7 103 45.6
RcHm_v2.0_Chr2g0092791 Rosa chinensis HOM05D000007 ORTHO05D005026 4.7e-15 84.3 100 48.0
FAN26G1387 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.2e-15 84.0 101 45.5
FAN26G0824 Fragaria x ananassa HOM05D000007 ORTHO05D005026 8.1e-15 83.6 101 44.6
RcHm_v2.0_Chr2g0099041 Rosa chinensis HOM05D000007 ORTHO05D005026 8.1e-15 83.6 94 48.9
FAN26G1005 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.2e-13 79.7 100 45.0
FAN23G0799 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.4e-13 78.2 101 42.6
FAN28G0694 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.4e-13 77.8 100 44.0
FAN23G1105 Fragaria x ananassa HOM05D000007 ORTHO05D005026 9.9e-13 76.6 100 45.0
FAN03G0960 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-12 76.3 86 47.7
FAN19G3004 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.2e-12 75.5 59 61.0
FAN10G0833 Fragaria x ananassa HOM05D000007 ORTHO05D005026 2.9e-12 75.1 86 46.5
RcHm_v2.0_Chr2g0090941 Rosa chinensis HOM05D000007 ORTHO05D005026 4.9e-12 74.3 100 45.0
FAN28G0211 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.4e-11 72.8 55 63.6
RcHm_v2.0_Chr2g0090951 Rosa chinensis HOM05D000007 ORTHO05D005026 2.4e-11 72.0 100 45.0
FAN10G2983 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-11 71.6 59 57.6
FAN19G0854 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-11 71.6 83 47.0
FAN19G2482 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-11 71.6 59 59.3
FAN23G0826 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-11 71.6 83 47.0
FAN28G2582 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.2e-11 71.6 98 43.9
FAN06G3469 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-11 71.2 83 44.6
FAN06G3806 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-11 71.2 86 45.3
FAN06G4337 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-11 71.2 83 44.6
FAN28G2752 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.1e-11 71.2 100 41.0
FAN06G4169 Fragaria x ananassa HOM05D000007 ORTHO05D005026 5.4e-11 70.9 98 42.9
FAN01G0498 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.6e-10 69.3 86 45.3
FAN03G0293 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.6e-10 67.8 99 40.4
FvH4_1g05230 Fragaria vesca HOM05D000007 ORTHO05D005026 1.3e-09 66.2 59 55.9
FAN10G2294 Fragaria x ananassa HOM05D000007 ORTHO05D005026 1.3e-09 66.2 81 46.9
FAN26G1853 Fragaria x ananassa HOM05D000007 ORTHO05D005026 3.0e-09 65.1 59 55.9
RcHm_v2.0_Chr0c44g0503541 Rosa chinensis HOM05D000007 ORTHO05D005026 5.1e-09 64.3 101 39.6
RcHm_v2.0_Chr2g0169971 Rosa chinensis HOM05D000007 ORTHO05D005026 5.1e-09 64.3 101 39.6
RcHm_v2.0_Chr2g0170021 Rosa chinensis HOM05D000007 ORTHO05D005026 5.1e-09 64.3 101 39.6
RcHm_v2.0_Chr4g0386131 Rosa chinensis HOM05D000007 ORTHO05D005026 5.1e-09 64.3 101 39.6
FAN06G1797 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.6e-09 63.9 56 55.4
FAN19G1737 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.6e-09 63.9 49 65.3
FAN03G2383 Fragaria x ananassa HOM05D000007 ORTHO05D005026 8.7e-09 63.5 92 40.2
FAN26G0837 Fragaria x ananassa HOM05D000007 ORTHO05D005026 8.7e-09 63.5 59 52.5
RcHm_v2.0_Chr4g0386281 Rosa chinensis HOM05D000007 ORTHO05D005026 1.1e-08 63.2 101 38.6
FvH4_4g32891 Fragaria vesca HOM05D000007 ORTHO05D005026 3.3e-08 61.6 105 41.0
FAN17G1529 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.3e-08 61.2 105 41.0
MD11G1202700 Malus domestica HOM05D000007 ORTHO05D005026 4.3e-08 61.2 83 38.6
RcHm_v2.0_Chr7g0231281 Rosa chinensis HOM05D000007 ORTHO05D005026 1.2e-07 59.7 84 44.0
FvH4_1g05391 Fragaria vesca HOM05D000007 ORTHO05D005026 1.6e-07 59.3 34 79.4
FAN17G2796 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.7e-07 57.8 59 42.4
FAN17G2956 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.7e-07 57.8 59 42.4
FAN05G2949 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.2e-07 57.4 59 52.5
FAN05G3112 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.2e-07 57.4 59 52.5
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.2e-07 57.4 57 49.1
Prupe.6G125500 Prunus persica HOM05D000007 ORTHO05D005026 6.2e-07 57.4 59 47.5
FvH4_1g05210 Fragaria vesca HOM05D000007 ORTHO05D005026 1.8e-06 55.8 59 45.8
RcHm_v2.0_Chr5g0072031 Rosa chinensis HOM05D000007 ORTHO05D005026 3.1e-06 55.1 60 46.7
FvH4_3g39990 Fragaria vesca HOM05D000007 ORTHO05D005026 4.0e-06 54.7 59 47.5
FAN11G3477 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.0e-06 54.7 59 47.5
FAN19G1652 Fragaria x ananassa HOM05D000007 ORTHO05D005026 4.0e-06 54.7 101 35.6
FAN26G3108 Fragaria x ananassa HOM05D000007 ORTHO05D005026 6.9e-06 53.9 75 41.3
MD11G1203000 Malus domestica HOM05D000007 ORTHO05D005026 9.0e-06 53.5 59 42.4


User provided reference genes

Program Settings