Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 8.8e-95 350.1 160 100.0
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 5.4e-76 287.7 138 94.9
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-51 206.5 166 58.4
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-51 205.7 160 57.5
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 3.5e-51 205.3 164 60.4
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-50 202.6 160 56.9
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 2.5e-49 199.1 163 60.1
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-49 198.7 163 58.3
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-49 198.0 163 58.3
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.3e-49 197.6 164 57.9
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.5e-49 197.2 162 58.6
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-48 196.8 159 57.2
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.2e-48 196.8 166 59.0
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-48 196.4 162 56.8
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-48 195.7 163 58.3
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 2.8e-48 195.7 162 58.0
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-48 194.5 162 56.2
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-48 194.5 164 57.3
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 8.1e-48 194.1 165 57.0
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 8.1e-48 194.1 152 57.2
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.1e-48 194.1 162 57.4
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-47 192.2 162 56.8
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.2e-47 191.4 164 54.3
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 6.8e-47 191.0 157 58.0
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-47 191.0 165 55.8
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.9e-47 190.7 152 56.6
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-46 190.3 165 56.4
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 3.4e-46 188.7 165 56.4
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 4.4e-46 188.3 162 54.9
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.4e-46 188.3 164 56.1
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-45 186.8 165 55.8
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-45 186.8 162 53.7
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-45 186.8 162 53.7
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-45 185.7 162 54.3
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 4.2e-44 181.8 165 55.2
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-42 176.8 160 53.1
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.6e-40 169.9 164 49.4
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.7e-40 168.3 200 44.5
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.6e-34 147.9 145 48.3
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-33 144.1 156 46.8
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 9.6e-33 144.1 166 46.4
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-32 143.3 163 44.2
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-32 142.9 158 44.3
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-32 142.5 133 51.9
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-31 139.8 98 60.2
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-31 137.9 132 49.2
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-27 126.3 101 54.5
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-27 126.3 170 44.7
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-26 123.2 171 39.8
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-26 122.5 171 39.2
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 1.9e-25 119.8 121 51.2
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-25 119.0 121 51.2
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-24 116.3 121 50.4
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-24 115.9 160 39.4
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 1.4e-23 113.6 160 38.8
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-22 109.8 69 68.1
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 4.5e-22 108.6 171 36.3
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-21 106.3 69 66.7
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-21 105.5 155 38.1
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-20 102.4 147 41.5
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.3e-20 100.9 177 37.3
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-19 100.1 133 42.9
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 2.7e-19 99.4 183 38.3
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-19 99.4 161 37.3
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.3e-18 96.3 160 38.1
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-18 95.5 62 64.5
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-17 90.9 149 38.9
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-16 90.1 154 33.8
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-16 88.2 164 36.6
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-15 87.0 160 36.2
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.4e-15 87.0 160 36.2
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.3e-15 85.1 104 45.2
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.9e-13 78.6 123 39.0
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-12 76.6 118 39.0
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.3e-12 74.3 66 51.5
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 1.2e-11 73.9 57 52.6
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-09 65.5 76 48.7
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 1.3e-08 63.9 54 53.7
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 2.2e-08 63.2 51 56.9
FAN28G2349 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-08 62.8 103 38.8
FAN28G2648 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.8e-08 62.8 103 38.8


User provided reference genes

Program Settings