Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0089941 Rosa chinensis HOM05D000462 ORTHO05D001280 4.1e-87 324.7 164 100.0
RcHm_v2.0_Chr1g0342641 Rosa chinensis HOM05D000462 ORTHO05D001280 1.6e-75 286.2 147 96.6
FAN10G3121 Fragaria x ananassa HOM05D000462 ORTHO05D001280 6.0e-38 161.4 154 65.6
FAN03G0745 Fragaria x ananassa HOM05D000462 ORTHO05D001280 5.6e-36 154.8 154 63.6
FvH4_7g07680 Fragaria vesca HOM05D000462 ORTHO05D001280 1.6e-35 153.3 152 63.2
FAN06G0538 Fragaria x ananassa HOM05D000462 ORTHO05D001280 1.6e-35 153.3 152 63.2
MD07G1080200 Malus domestica HOM05D000462 ORTHO05D001280 2.4e-31 139.4 173 54.9
Prupe.2G104200 Prunus persica HOM05D000462 ORTHO05D001280 1.2e-27 127.1 176 50.0
QL04p053156 Quercus lobata HOM05D000462 ORTHO05D001280 4.7e-27 125.2 172 47.1
Manes.08G157200 Manihot esculenta HOM05D000462 ORTHO05D001280 2.3e-26 122.9 175 49.7
CSS0035065 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D001280 3.4e-25 119.0 181 47.0
Sabra13G0062100 Salix brachista HOM05D000462 ORTHO05D001280 9.9e-25 117.5 177 46.9
Potri.013G071900 Populus trichocarpa HOM05D000462 ORTHO05D001280 2.2e-24 116.3 177 46.3
Cpa.g.sc73.75 Carica papaya HOM05D000462 ORTHO05D001280 1.1e-23 114.0 148 51.4
Glyma.15G275300 Glycine max HOM05D000462 ORTHO05D001280 7.1e-23 111.3 174 44.3
Dinv43968 Davidia involucrata HOM05D000462 ORTHO05D001280 1.2e-22 110.5 179 46.4
Glyma.10G088400 Glycine max HOM05D000462 ORTHO05D001280 1.2e-22 110.5 164 48.2
Lj6g0014844 Lotus japonicus HOM05D000462 ORTHO05D001280 1.2e-22 110.5 166 44.0
Cfa003691 Carpinus fangiana HOM05D000462 ORTHO05D001280 7.8e-22 107.8 181 44.2
MD02G1233400 Malus domestica HOM05D000462 ORTHO05D001280 7.8e-22 107.8 191 41.9
Haze_15796 Corylus avellana HOM05D000462 ORTHO05D001280 1.7e-21 106.7 182 44.5
VMungo1080G1750 Vigna mungo HOM05D000462 ORTHO05D001280 2.3e-21 106.3 158 47.5
TWI32G0699 Tripterygium wilfordii HOM05D000462 ORTHO05D001280 1.1e-20 104.0 170 45.9
Lj7P559T52 Lonicera japonica HOM05D000462 ORTHO05D001280 3.3e-20 102.4 185 44.3
CiPaw.01G114800 Carya illinoinensis HOM05D000462 ORTHO05D001280 5.6e-20 101.7 180 42.2
Phvul.005G022300 Phaseolus vulgaris HOM05D000462 ORTHO05D001280 5.6e-20 101.7 164 45.1
Duzib106G1150 Durio zibethinus HOM05D000462 ORTHO05D001280 1.2e-19 100.5 153 48.4
Ciclev10031652m.g Citrus clementina HOM05D000462 ORTHO05D001280 2.1e-19 99.8 158 48.1
Duzib128G0793 Durio zibethinus HOM05D000462 ORTHO05D001280 2.8e-19 99.4 159 49.1
Solyc01g081390.4 Solanum lycopersicum HOM05D000462 ORTHO05D001280 2.8e-19 99.4 155 47.7
Psat1g169480 Pisum sativum HOM05D000462 ORTHO05D001280 4.7e-19 98.6 170 42.4
Rhsim12G0144400 Rhododendron simsii HOM05D000462 ORTHO05D001280 1.1e-18 97.4 171 45.0
Sopen01g032960 Solanum pennellii HOM05D000462 ORTHO05D001280 1.4e-18 97.1 155 47.1
arahy.Tifrunner.gnm1.ann1.6KN2PA Arachis hypogaea HOM05D000462 ORTHO05D001280 1.8e-18 96.7 169 43.8
TPR.G17489 Trifolium pratense HOM05D000462 ORTHO05D001280 1.8e-18 96.7 168 42.9
Thecc.05G233600 Theobroma cacao HOM05D000462 ORTHO05D001280 2.4e-18 96.3 159 44.0
arahy.Tifrunner.gnm1.ann1.U11QFP Arachis hypogaea HOM05D000462 ORTHO05D001280 3.1e-18 95.9 177 42.9
PGSC0003DMG400044320 Solanum tuberosum HOM05D000462 ORTHO05D001280 3.1e-18 95.9 155 47.1
Lalb_Chr15g0088621 Lupinus albus HOM05D000462 ORTHO05D001280 5.2e-18 95.1 169 43.8
Nitab4.5_0015362g0010 Nicotiana tabacum HOM05D000462 ORTHO05D001280 5.2e-18 95.1 155 45.8
Nitab4.5_0000792g0050 Nicotiana tabacum HOM05D000462 ORTHO05D001280 1.2e-17 94.0 155 45.2
Atru.chr2.1658 Acer truncatum HOM05D000462 ORTHO05D001280 2.0e-17 93.2 161 47.8
CANSAT21G0649 Cannabis sativa HOM05D000462 ORTHO05D001280 2.0e-17 93.2 155 39.4
VMungo1383G3739 Vigna mungo HOM05D000462 ORTHO05D001280 2.6e-17 92.8 158 44.3
AT5G17630 Arabidopsis thaliana HOM05D000462 ORTHO05D001280 3.4e-17 92.4 142 45.1
Carub.0006s1587 Capsella rubella HOM05D000462 ORTHO05D001280 7.6e-17 91.3 146 43.8
CARHR195550 Cardamine hirsuta HOM05D000462 ORTHO05D001280 7.6e-17 91.3 145 42.8
AL6G28720 Arabidopsis lyrata HOM05D000462 ORTHO05D001280 1.3e-16 90.5 142 45.1
HanXRQChr13g0411641 Helianthus annuus HOM05D000462 ORTHO05D001280 1.7e-16 90.1 149 42.3
DCAR_015746 Daucus carota HOM05D000462 ORTHO05D001280 2.2e-16 89.7 170 41.8
CAN.G992.15 Capsicum annuum HOM05D000462 ORTHO05D001280 2.9e-16 89.4 161 41.0
Cc05_g03120 Coffea canephora HOM05D000462 ORTHO05D001280 4.9e-16 88.6 158 43.7
Gohir.D13G101600 Gossypium hirsutum HOM05D000462 ORTHO05D001280 6.4e-16 88.2 158 43.0
Gorai.013G113700 Gossypium raimondii HOM05D000462 ORTHO05D001280 6.4e-16 88.2 158 43.0
Lsat_1_v5_gn_5_59100 Lactuca sativa HOM05D000462 ORTHO05D001280 1.1e-15 87.4 159 42.8
Lalb_Chr18g0057831 Lupinus albus HOM05D000462 ORTHO05D001280 1.4e-15 87.0 166 41.6
Medtr2g029180 Medicago truncatula HOM05D000462 ORTHO05D001280 1.4e-15 87.0 168 38.1
Peaxi162Scf00907g10027 Petunia axillaris HOM05D000462 ORTHO05D001280 1.4e-15 87.0 98 52.0
PGR031G0127 Punica granatum HOM05D000462 ORTHO05D001280 1.4e-15 87.0 156 44.9
Gohir.A13G091100 Gossypium hirsutum HOM05D000462 ORTHO05D001280 1.9e-15 86.7 155 44.5
Ah.05g177150 Amaranthus hybridus HOM05D000462 ORTHO05D001280 4.2e-15 85.5 148 43.2
Eucgr.E01754 Eucalyptus grandis HOM05D000462 ORTHO05D001280 5.4e-15 85.1 189 40.7
THA.LOC104820819 Tarenaya hassleriana HOM05D000462 ORTHO05D001280 1.2e-14 84.0 155 42.6
CsaV3_3G009960 Cucumis sativus L. HOM05D000462 ORTHO05D001280 3.5e-14 82.4 142 41.5
Aa31LG11G12010 Aethionema arabicum HOM05D000462 ORTHO05D001280 1.0e-13 80.9 147 44.2
MSTRG.4987 Avicennia marina HOM05D000462 ORTHO05D001280 1.0e-13 80.9 161 41.0
MELO3C006217.2 Cucumis melo HOM05D000462 ORTHO05D001280 1.0e-13 80.9 139 41.0
HanXRQChr03g0082991 Helianthus annuus HOM05D000462 ORTHO05D001280 2.3e-13 79.7 165 37.6
PSO063G7523 Papaver somniferum HOM05D000462 ORTHO05D001280 5.1e-13 78.6 93 51.6
TAR629G2982 Trochodendron aralioides HOM05D000462 ORTHO05D001280 5.1e-13 78.6 65 58.5
Oeu020237.1 Olea europaea HOM05D000462 ORTHO05D001280 8.7e-13 77.8 118 43.2
PSO782G4210 Papaver somniferum HOM05D000462 ORTHO05D001280 8.7e-13 77.8 93 51.6
SGA_v2.0_scaffold4G02222 Striga asiatica HOM05D000462 ORTHO05D001280 8.7e-13 77.8 179 40.2
BcaB08g36757 Brassica carinata HOM05D000462 ORTHO05D001280 1.5e-12 77.0 154 38.3
Sed0011480 Sechium edule HOM05D000462 ORTHO05D001280 1.5e-12 77.0 144 43.1
Actinidia33590 Actinidia chinensis HOM05D000462 ORTHO05D001280 1.9e-12 76.6 160 42.5
AUR62014514 Chenopodium quinoa HOM05D000462 ORTHO05D006023 1.9e-12 76.6 154 39.0
Thhalv10015991m.g Eutrema salsugineum HOM05D000462 ORTHO05D001280 5.6e-12 75.1 134 44.0
MBI04_g30780_MAGBIO Magnolia biondii HOM05D000046 ORTHO05D000457 7.3e-12 74.7 65 56.9
Sp6g26590 Schrenkiella parvula HOM05D000462 ORTHO05D001280 9.6e-12 74.3 142 41.5
Nn1g09220 Nelumbo nucifera HOM05D000462 ORTHO05D001280 2.1e-11 73.2 77 53.2
BcaC04g18773 Brassica carinata HOM05D000462 ORTHO05D001280 2.8e-11 72.8 119 39.5
C09p59540 Brassica napus HOM05D000462 ORTHO05D001280 2.8e-11 72.8 119 39.5
BolC9t58792H Brassica oleracea HOM05D000462 ORTHO05D001280 2.8e-11 72.8 119 39.5
BraA10t44238Z Brassica rapa HOM05D000462 ORTHO05D001280 1.4e-10 70.5 111 40.5
A10p21780 Brassica napus HOM05D000462 ORTHO05D001280 3.1e-10 69.3 150 36.0
Sc04g0008460 Simmondsia chinensis HOM05D000462 ORTHO05D002455 4.0e-10 68.9 93 45.2
SalBow4G1052 Salvia bowleyana HOM05D000462 ORTHO05D001280 2.0e-09 66.6 33 78.8
SalBow4G2925 Salvia bowleyana HOM05D000462 ORTHO05D001280 2.0e-09 66.6 33 78.8
ATR0829G124 Amborella trichopoda HOM05D000462 ORTHO05D001280 3.4e-09 65.9 92 38.0
CBR_g11124 Chara braunii HOM05D000462 ORTHO05D001280 2.2e-08 63.2 32 78.1
Migut.N01675 Erythranthe guttata HOM05D000462 ORTHO05D001280 2.2e-08 63.2 157 35.0
Pp3c12_14510 Physcomitrium patens HOM05D000462 ORTHO05D001280 2.2e-08 63.2 59 47.5
Haze_14700 Corylus avellana HOM05D000462 ORTHO05D002607 4.9e-08 62.0 117 36.8
CBR_g79225 Chara braunii HOM05D000462 ORTHO05D001280 8.4e-08 61.2 54 51.9
Dinv43525 Davidia involucrata HOM05D000462 ORTHO05D005846 8.4e-08 61.2 143 40.6
Pp3c4_10140 Physcomitrium patens HOM05D000462 ORTHO05D001280 1.9e-07 60.1 144 35.4
unitig_747.g22050 Utricularia gibba HOM05D000462 ORTHO05D001280 1.9e-07 60.1 68 47.1
arahy.Tifrunner.gnm1.ann1.QY9S03 Arachis hypogaea HOM05D000462 ORTHO05D002607 2.4e-07 59.7 105 37.1
Cfa007405 Carpinus fangiana HOM05D003958 ORTHO05D004864 2.4e-07 59.7 117 37.6
Sabra11G0122100 Salix brachista HOM05D000462 ORTHO05D001280 2.4e-07 59.7 74 43.2
arahy.Tifrunner.gnm1.ann1.1QH4LM Arachis hypogaea HOM05D000462 ORTHO05D001280 3.2e-07 59.3 88 40.9
arahy.Tifrunner.gnm1.ann1.RRAK1Y Arachis hypogaea HOM05D000462 ORTHO05D001280 3.2e-07 59.3 88 40.9
arahy.Tifrunner.gnm1.ann1.Y6HHW7 Arachis hypogaea HOM05D000462 ORTHO05D002607 4.2e-07 58.9 104 35.6
Potri.001G420200 Populus trichocarpa HOM05D000462 ORTHO05D001280 4.2e-07 58.9 74 41.9
Prupe.4G207800 Prunus persica HOM05D000462 ORTHO05D001280 4.2e-07 58.9 77 42.9
RcHm_v2.0_Chr5g0003801 Rosa chinensis HOM05D000462 ORTHO05D001280 4.2e-07 58.9 41 61.0
Hma1.2p1_0091F.1_g046240 Hydrangea macrophylla HOM05D000462 ORTHO05D001280 5.4e-07 58.5 119 32.8
QL02p075638 Quercus lobata HOM05D000462 ORTHO05D002607 7.1e-07 58.2 88 39.8
Pp3c4_8130 Physcomitrium patens HOM05D000462 ORTHO05D001280 1.2e-06 57.4 59 47.5
AagrBONN_evm.TU.Sc2ySwM_228.137 Anthoceros agrestis HOM05D000462 ORTHO05D001280 1.6e-06 57.0 89 36.0
Sabra16G0285200 Salix brachista HOM05D000462 ORTHO05D001280 1.6e-06 57.0 71 42.3
Solyc02g086650.3 Solanum lycopersicum HOM05D000462 ORTHO05D002607 1.6e-06 57.0 45 53.3
Sopen02g031400 Solanum pennellii HOM05D000462 ORTHO05D002607 1.6e-06 57.0 45 53.3
vmacro16615 Vaccinium macrocarpon HOM05D000462 ORTHO05D002607 1.6e-06 57.0 145 31.7
CDE12G0654 Ceratophyllum demersum HOM05D000462 ORTHO05D001280 2.1e-06 56.6 63 46.0
HanXRQChr03g0077511 Helianthus annuus HOM05D000462 ORTHO05D001280 2.1e-06 56.6 65 44.6
Potri.011G135900 Populus trichocarpa HOM05D000462 ORTHO05D001280 2.1e-06 56.6 74 40.5
Hund09445 Selenicereus undatus HOM05D000462 ORTHO05D002607 2.1e-06 56.6 160 31.2
Aa31LG1G3150 Aethionema arabicum HOM05D000462 ORTHO05D001280 2.7e-06 56.2 33 63.6
Ah.04g165640 Amaranthus hybridus HOM05D000462 ORTHO05D001280 2.7e-06 56.2 118 29.7
CDE01G0822 Ceratophyllum demersum HOM05D000462 ORTHO05D001280 2.7e-06 56.2 59 47.5
Dinv40731 Davidia involucrata HOM05D000462 ORTHO05D001280 2.7e-06 56.2 115 33.0
Nitab4.5_0001724g0010 Nicotiana tabacum HOM05D000462 ORTHO05D002607 2.7e-06 56.2 140 33.6
VMungo0464G0033 Vigna mungo HOM05D000462 ORTHO05D002607 2.7e-06 56.2 100 37.0
Hund02106 Selenicereus undatus HOM05D000462 ORTHO05D001280 3.5e-06 55.8 58 43.1
Hund23286 Selenicereus undatus HOM05D000462 ORTHO05D001280 3.5e-06 55.8 53 45.3
PGSC0003DMG400000484 Solanum tuberosum HOM05D000462 ORTHO05D002607 3.5e-06 55.8 119 32.8
arahy.Tifrunner.gnm1.ann1.9KK9VG Arachis hypogaea HOM05D000462 ORTHO05D001280 4.6e-06 55.5 53 43.4
arahy.Tifrunner.gnm1.ann1.W19FZB Arachis hypogaea HOM05D000462 ORTHO05D001280 4.6e-06 55.5 53 43.4
CiPaw.11G186300 Carya illinoinensis HOM05D000462 ORTHO05D001280 4.6e-06 55.5 67 40.3
CDE02G2262 Ceratophyllum demersum HOM05D000462 ORTHO05D001280 4.6e-06 55.5 93 38.7
Nn1g07078 Nelumbo nucifera HOM05D000462 ORTHO05D001280 4.6e-06 55.5 96 36.5
PSO210G5427 Papaver somniferum HOM05D000462 ORTHO05D001280 4.6e-06 55.5 119 34.5
SGA_v2.0_scaffold8G04298 Striga asiatica HOM05D000462 ORTHO05D001280 4.6e-06 55.5 60 40.0
Actinidia35757 Actinidia chinensis HOM05D000462 ORTHO05D002607 6.0e-06 55.1 83 39.8
CSS0025053 Camellia sinensis var. sinensis HOM05D000462 ORTHO05D002607 6.0e-06 55.1 139 33.1
Ca_00628_v3 Cicer arietinum L. HOM05D000462 ORTHO05D001280 6.0e-06 55.1 120 34.2
MELO3C025401.2 Cucumis melo HOM05D000462 ORTHO05D001280 6.0e-06 55.1 77 41.6
FvH4_6g51010 Fragaria vesca HOM05D000462 ORTHO05D002607 6.0e-06 55.1 116 32.8
FAN14G0618 Fragaria x ananassa HOM05D003958 ORTHO05D004864 6.0e-06 55.1 116 32.8
MD03G1208900 Malus domestica HOM05D000462 ORTHO05D001280 6.0e-06 55.1 72 40.3
Manes.03G127800 Manihot esculenta HOM05D000462 ORTHO05D001280 6.0e-06 55.1 71 40.8
Medtr2g022700 Medicago truncatula HOM05D000462 ORTHO05D001280 6.0e-06 55.1 87 37.9
Sed0023072 Sechium edule HOM05D000462 ORTHO05D001280 6.0e-06 55.1 61 44.3
Solyc03g031740.3 Solanum lycopersicum HOM05D000462 ORTHO05D001280 6.0e-06 55.1 94 38.3
Zm00001eb106160 Zea mays HOM05D000462 ORTHO05D001280 6.0e-06 55.1 67 38.8
ClCG10G005580 Citrullus lanatus HOM05D000462 ORTHO05D001280 7.8e-06 54.7 64 45.3
Os07g0523400 Oryza sativa ssp. japonica HOM05D000462 ORTHO05D001280 7.8e-06 54.7 78 38.5
Psat1g183040 Pisum sativum HOM05D000462 ORTHO05D001280 7.8e-06 54.7 134 31.3
TAR629G2375 Trochodendron aralioides HOM05D000462 ORTHO05D001280 7.8e-06 54.7 75 42.7


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