Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0089871 Rosa chinensis HOM05D006732 ORTHO05D005682 1.3e-81 306.2 140 100.0
RcHm_v2.0_Chr2g0090141 Rosa chinensis HOM05D006732 ORTHO05D005682 3.6e-76 288.1 138 94.9
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-45 186.0 140 60.7
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-42 176.4 142 59.2
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-42 176.0 140 57.9
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-42 176.0 140 57.9
FAN28G0011 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.4e-42 175.3 138 59.4
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 4.4e-42 174.9 137 55.5
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 4.4e-42 174.9 140 57.9
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 5.8e-42 174.5 139 59.0
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.9e-42 173.7 140 57.9
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-41 173.3 139 56.1
FAN26G2691 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.4e-41 171.0 137 54.7
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-40 169.5 138 55.1
FAN26G0144 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-40 169.5 137 58.4
FvH4_5g09163 Fragaria vesca HOM05D006732 ORTHO05D005682 3.2e-40 168.7 131 58.8
FAN26G1852 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-39 166.8 139 56.8
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 2.1e-39 166.0 140 56.4
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-39 165.6 140 55.7
FAN19G1623 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.5e-39 165.2 139 56.8
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 6.0e-39 164.5 129 55.8
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 7.8e-39 164.1 140 55.7
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-39 164.1 140 55.7
FAN19G0608 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-39 164.1 139 56.8
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.8e-39 164.1 136 55.1
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-38 163.7 139 55.4
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.0e-38 162.2 140 55.0
FAN26G0550 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-37 160.2 129 55.0
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-37 159.5 139 53.2
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 1.9e-37 159.5 140 54.3
FvH4_1g04850 Fragaria vesca HOM05D006732 ORTHO05D005682 4.3e-37 158.3 139 53.2
FAN23G1399 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-37 158.3 139 53.2
FAN23G2814 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.3e-37 158.3 139 53.2
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 9.6e-37 157.1 140 54.3
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-36 156.8 131 55.0
FAN23G0993 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-36 155.2 139 53.2
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-33 146.7 140 50.0
FAN26G2548 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.6e-31 138.3 132 49.2
FAN26G3406 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.9e-30 135.2 157 43.3
FAN23G1448 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.7e-30 134.0 131 48.9
FvH4_1g07301 Fragaria vesca HOM05D006732 ORTHO05D005682 1.5e-29 133.3 98 57.1
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.9e-29 132.9 88 62.5
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-29 130.6 121 49.6
FAN08G2174 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.4e-27 125.9 101 55.4
RcHm_v2.0_Chr4g0406891 Rosa chinensis HOM05D006732 ORTHO05D005682 4.5e-26 121.7 141 45.4
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.2e-25 119.4 106 50.9
FvH4_1g05020 Fragaria vesca HOM05D006732 ORTHO05D005682 3.8e-25 118.6 109 52.3
FvH4_1g03120 Fragaria vesca HOM05D006732 ORTHO05D005682 3.9e-22 108.6 146 40.4
FAN19G1106 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.7e-22 107.8 146 39.7
FAN28G1694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.3e-21 105.5 145 44.1
FAN23G2570 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.6e-21 104.8 69 63.8
FAN23G1741 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.6e-20 103.2 118 46.6
FvH4_1g03730 Fragaria vesca HOM05D006732 ORTHO05D005682 2.8e-20 102.4 147 39.5
FAN23G1506 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.2e-20 101.3 69 62.3
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-19 99.4 146 37.7
FAN19G1213 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.1e-19 99.0 116 45.7
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.9e-19 97.8 124 40.3
FvH4_6g38540 Fragaria vesca HOM05D006732 ORTHO05D005682 3.4e-18 95.5 124 39.5
FAN26G1044 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-17 94.0 148 38.5
FAN28G1562 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-17 93.6 62 62.9
FAN23G1684 Fragaria x ananassa HOM05D006732 ORTHO05D005682 5.5e-16 88.2 124 37.9
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 7.1e-16 87.8 98 48.0
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.1e-16 87.8 98 46.9
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-15 87.0 98 48.0
FAN12G0204 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.1e-15 86.3 104 45.2
FAN19G1906 Fragaria x ananassa HOM05D006732 ORTHO05D005682 7.9e-15 84.3 122 41.0
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 5.1e-14 81.6 158 37.3
FAN01G2330 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-13 80.5 137 36.5
FAN23G1373 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.6e-13 77.4 66 53.0
FvH4_4g06202 Fragaria vesca HOM05D006732 ORTHO05D005682 1.3e-12 77.0 57 56.1
FAN06G2841 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.2e-12 74.3 137 35.0
FAN06G4694 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.2e-12 74.3 137 35.0
FAN03G3183 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-11 73.9 126 36.5
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 4.1e-11 72.0 139 35.3
RcHm_v2.0_Chr2g0090221 Rosa chinensis HOM05D006732 ORTHO05D005682 1.5e-10 70.1 140 30.7
FvH4_1g04910 Fragaria vesca HOM05D006732 ORTHO05D046085 6.5e-09 64.7 54 53.7
FAN19G2861 Fragaria x ananassa HOM05D006732 ORTHO05D046085 1.1e-08 63.9 51 56.9
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.1e-07 58.2 105 35.2
FAN19G0291 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-06 56.6 62 50.0
FAN26G3385 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.0e-06 55.8 83 38.6


User provided reference genes

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