Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0089051 Rosa chinensis HOM05D006513 ORTHO05D008150 1.2e-109 399.8 198 100.0
FvH4_1g03550 Fragaria vesca HOM05D006513 ORTHO05D008150 6.6e-100 367.5 199 92.0
FAN19G1517 Fragaria x ananassa HOM05D006513 ORTHO05D008150 6.6e-100 367.5 199 92.0
FAN26G1752 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.5e-99 365.5 199 91.5
FAN28G2022 Fragaria x ananassa HOM05D006513 ORTHO05D008150 2.5e-99 365.5 199 91.5
Prupe.7G240600 Prunus persica HOM05D006513 ORTHO05D008150 1.3e-87 326.6 199 82.9
MD02G1034700 Malus domestica HOM05D006513 ORTHO05D008150 2.1e-82 309.3 199 79.9
MD15G1175500 Malus domestica HOM05D006513 ORTHO05D008150 5.1e-76 288.1 199 76.4
CANSAT11G2038 Cannabis sativa HOM05D006513 ORTHO05D008150 2.6e-72 275.8 187 73.8
CiPaw.03G242700 Carya illinoinensis HOM05D006513 ORTHO05D008150 5.5e-70 268.1 187 73.8
Thecc.09G123900 Theobroma cacao HOM05D006513 ORTHO05D008150 1.8e-68 263.1 187 68.4
Potri.018G066700 Populus trichocarpa HOM05D006513 ORTHO05D008150 2.3e-68 262.7 188 71.8
Manes.06G049600 Manihot esculenta HOM05D006513 ORTHO05D008150 5.1e-68 261.5 187 71.7
TWI34G1228 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 5.1e-68 261.5 187 71.7
Manes.14G131100 Manihot esculenta HOM05D006513 ORTHO05D008150 6.7e-68 261.2 187 71.7
Haze_25608 Corylus avellana HOM05D006513 ORTHO05D008150 2.5e-67 259.2 202 68.3
Sabra18G0060100 Salix brachista HOM05D006513 ORTHO05D008150 2.5e-67 259.2 188 70.7
Sed0011750 Sechium edule HOM05D006513 ORTHO05D008150 1.6e-66 256.5 187 69.0
Gohir.A07G035100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 2.8e-66 255.8 189 67.7
Gorai.001G041200 Gossypium raimondii HOM05D006513 ORTHO05D008150 2.8e-66 255.8 189 67.7
Gohir.D07G039100 Gossypium hirsutum HOM05D006513 ORTHO05D008150 6.2e-66 254.6 189 67.7
Cc06_g08720 Coffea canephora HOM05D006513 ORTHO05D008150 8.1e-66 254.2 187 65.8
PGR102G1904 Punica granatum HOM05D006513 ORTHO05D008150 1.2e-64 250.4 188 68.1
Duzib187G1241 Durio zibethinus HOM05D006513 ORTHO05D008150 2.0e-64 249.6 187 65.2
Gohir.A08G239200 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.7e-63 246.5 187 65.2
Hma1.2p1_0665F.1_g199090 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 2.2e-63 246.1 188 66.0
Psat4g039440 Pisum sativum HOM05D006513 ORTHO05D008150 2.2e-63 246.1 196 65.8
Sp6g24280 Schrenkiella parvula HOM05D006513 ORTHO05D008150 1.4e-62 243.4 188 65.4
TPR.G10698 Trifolium pratense HOM05D006513 ORTHO05D008150 1.4e-62 243.4 195 65.6
TWI63G1281 Tripterygium wilfordii HOM05D006513 ORTHO05D008150 1.4e-62 243.4 191 67.5
GSVIVG01015511001 Vitis vinifera HOM05D006513 ORTHO05D008150 1.4e-62 243.4 187 66.8
arahy.Tifrunner.gnm1.ann1.7JIW3E Arachis hypogaea HOM05D006513 ORTHO05D008150 2.5e-62 242.7 196 64.8
Lj4g0014130 Lotus japonicus HOM05D006513 ORTHO05D008150 3.2e-62 242.3 195 65.1
Ciclev10009612m.g Citrus clementina HOM05D006513 ORTHO05D008150 9.3e-62 240.7 188 68.1
Actinidia26398 Actinidia chinensis HOM05D006513 ORTHO05D008150 1.2e-61 240.4 189 64.6
Duzib150G1190 Durio zibethinus HOM05D006513 ORTHO05D008150 1.2e-61 240.4 184 64.1
BcaB05g22870 Brassica carinata HOM05D006513 ORTHO05D008150 2.7e-61 239.2 188 64.4
Eucgr.C04187 Eucalyptus grandis HOM05D006513 ORTHO05D008150 3.5e-61 238.8 188 64.4
Aa31LG1G14240 Aethionema arabicum HOM05D006513 ORTHO05D008150 4.6e-61 238.4 188 62.2
Dinv41526 Davidia involucrata HOM05D006513 ORTHO05D008150 4.6e-61 238.4 188 63.3
QL02p087926 Quercus lobata HOM05D006513 ORTHO05D008150 4.6e-61 238.4 250 54.4
CARHR192710 Cardamine hirsuta HOM05D006513 ORTHO05D008150 6.0e-61 238.0 188 63.8
PSO455G0031 Papaver somniferum HOM05D006513 ORTHO05D008150 6.0e-61 238.0 189 65.1
BcaC03g13734 Brassica carinata HOM05D006513 ORTHO05D008150 1.0e-60 237.3 188 63.3
Lsat_1_v5_gn_7_45681 Lactuca sativa HOM05D006513 ORTHO05D008150 2.3e-60 236.1 185 64.3
AL6G31670 Arabidopsis lyrata HOM05D006513 ORTHO05D008150 3.0e-60 235.7 188 64.4
BolC2t07016H Brassica oleracea HOM05D006513 ORTHO05D008150 3.0e-60 235.7 188 62.8
Carub.0006s1850 Capsella rubella HOM05D006513 ORTHO05D008150 3.9e-60 235.3 188 64.9
Gorai.004G277700 Gossypium raimondii HOM05D006513 ORTHO05D008150 5.1e-60 235.0 221 56.6
A02p06050 Brassica napus HOM05D006513 ORTHO05D008150 6.7e-60 234.6 188 62.8
BraA02t05556Z Brassica rapa HOM05D006513 ORTHO05D008150 6.7e-60 234.6 188 62.8
PSO170G2269 Papaver somniferum HOM05D006513 ORTHO05D008150 1.1e-59 233.8 189 63.5
Phvul.003G163500 Phaseolus vulgaris HOM05D006513 ORTHO05D008150 1.5e-59 233.4 194 64.4
AT5G20120 Arabidopsis thaliana HOM05D006513 ORTHO05D008150 2.5e-59 232.6 188 63.8
Thhalv10014769m.g Eutrema salsugineum HOM05D006513 ORTHO05D008150 5.7e-59 231.5 188 63.8
Nitab4.5_0002556g0080 Nicotiana tabacum HOM05D006513 ORTHO05D008150 5.7e-59 231.5 192 63.0
CAN.G377.11 Capsicum annuum HOM05D006513 ORTHO05D008150 7.4e-59 231.1 188 62.2
Sed0002363 Sechium edule HOM05D006513 ORTHO05D008150 7.4e-59 231.1 188 64.4
ECA240G2511 Erigeron canadensis HOM05D006513 ORTHO05D008150 9.6e-59 230.7 188 62.2
Nitab4.5_0007523g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 9.6e-59 230.7 192 63.0
Glyma.17G115800 Glycine max HOM05D006513 ORTHO05D008150 1.6e-58 229.9 197 64.0
Glyma.13G168100 Glycine max HOM05D006513 ORTHO05D008150 3.7e-58 228.8 197 64.0
Nn2g12003 Nelumbo nucifera HOM05D006513 ORTHO05D008150 3.7e-58 228.8 187 62.6
Rhsim03G0247400 Rhododendron simsii HOM05D006513 ORTHO05D008150 4.8e-58 228.4 190 63.2
CSS0037158 Camellia sinensis var. sinensis HOM05D006513 ORTHO05D008150 1.1e-57 227.3 190 60.5
Peaxi162Scf00984g00021 Petunia axillaris HOM05D006513 ORTHO05D008150 1.1e-57 227.3 187 62.6
Solyc12g006660.2 Solanum lycopersicum HOM05D006513 ORTHO05D008150 2.4e-57 226.1 188 62.2
Sopen12g002610 Solanum pennellii HOM05D006513 ORTHO05D008150 3.1e-57 225.7 188 61.7
vmacro06122 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.1e-57 225.7 188 63.3
vmacro06182 Vaccinium macrocarpon HOM05D006513 ORTHO05D008150 3.1e-57 225.7 188 63.3
BNapus_Darmor_BZH_scaffold_38p01790 Brassica napus HOM05D006513 ORTHO05D008150 9.0e-57 224.2 194 60.8
PGSC0003DMG401020668 Solanum tuberosum HOM05D006513 ORTHO05D008150 1.2e-56 223.8 188 62.2
HanXRQChr09g0242331 Helianthus annuus HOM05D006513 ORTHO05D008150 1.5e-56 223.4 191 59.7
THA.LOC104799645 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 1.5e-56 223.4 188 61.7
Sc08g0006720 Simmondsia chinensis HOM05D006513 ORTHO05D008150 2.0e-56 223.0 188 61.7
Medtr4g114105 Medicago truncatula HOM05D006513 ORTHO05D008150 2.6e-56 222.6 182 63.7
Lalb_Chr13g0301941 Lupinus albus HOM05D006513 ORTHO05D008150 1.7e-55 219.9 199 61.3
THA.LOC104811035 Tarenaya hassleriana HOM05D006513 ORTHO05D008150 5.0e-55 218.4 173 62.4
Aqoxy7G02130 Aquilegia oxysepala HOM05D006513 ORTHO05D008150 1.9e-54 216.5 189 60.8
Ah.09g225970 Amaranthus hybridus HOM05D006513 ORTHO05D008150 2.5e-54 216.1 191 58.6
EL10Ac8g18628 Beta vulgaris HOM05D006513 ORTHO05D008150 2.5e-54 216.1 191 59.2
Actinidia07430 Actinidia chinensis HOM05D006513 ORTHO05D008150 3.2e-54 215.7 191 60.2
Nn8g39411 Nelumbo nucifera HOM05D006513 ORTHO05D008150 7.2e-54 214.5 189 57.7
Hma1.2p1_3730F.1_g337400 Hydrangea macrophylla HOM05D006513 ORTHO05D008150 1.2e-53 213.8 191 58.6
TAR625G1184 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.5e-53 212.2 197 61.4
CsaV3_1G029880 Cucumis sativus L. HOM05D006513 ORTHO05D008150 4.6e-53 211.8 152 69.1
Lalb_Chr12g0197841 Lupinus albus HOM05D006513 ORTHO05D008150 2.3e-52 209.5 201 60.2
AUR62033489 Chenopodium quinoa HOM05D006513 ORTHO05D008150 5.1e-52 208.4 189 58.7
MELO3C010361.2 Cucumis melo HOM05D006513 ORTHO05D008150 6.7e-52 208.0 141 72.3
Oeu021588.1 Olea europaea HOM05D006513 ORTHO05D008150 9.7e-51 204.1 158 65.8
HanXRQChr03g0062541 Helianthus annuus HOM05D006513 ORTHO05D008150 1.6e-50 203.4 188 56.9
Ca_21690_v3 Cicer arietinum L. HOM05D006513 ORTHO05D008150 5.9e-48 194.9 153 62.7
arahy.Tifrunner.gnm1.ann1.PME717 Arachis hypogaea HOM05D006513 ORTHO05D008150 1.4e-46 190.3 191 57.1
Duzib168G2120 Durio zibethinus HOM05D006513 ORTHO05D008150 2.1e-45 186.4 150 62.7
AUR62011112 Chenopodium quinoa HOM05D000667 ORTHO05D002614 1.0e-44 184.1 160 60.0
MBI01_g37808_MAGBIO Magnolia biondii HOM05D006513 ORTHO05D008150 1.4e-44 183.7 189 53.4
TAR626G1980 Trochodendron aralioides HOM05D006513 ORTHO05D008150 2.3e-44 183.0 140 67.1
ClCG06G010970 Citrullus lanatus HOM05D006513 ORTHO05D008150 1.1e-43 180.6 152 61.2
Lj7A631T29 Lonicera japonica HOM05D006513 ORTHO05D008150 1.0e-39 167.5 144 61.8
HPP92_002794 Vanilla planifolia HOM05D006513 ORTHO05D008150 6.7e-36 154.8 187 47.1
Hund26496 Selenicereus undatus HOM05D006513 ORTHO05D008150 2.6e-35 152.9 133 57.1
Gohir.D08G259900 Gossypium hirsutum HOM05D006513 ORTHO05D008150 1.4e-33 147.1 102 68.6
VMungo1215G0117 Vigna mungo HOM05D006513 ORTHO05D008150 2.6e-32 142.9 189 48.1
ATR1156G011 Amborella trichopoda HOM05D006513 ORTHO05D008150 3.2e-30 136.0 179 44.1
Pp3c5_25700 Physcomitrium patens HOM05D006513 ORTHO05D008150 3.0e-28 129.4 124 50.8
Duzib150G1040 Durio zibethinus HOM05D006513 ORTHO05D008150 5.2e-28 128.6 96 62.5
SEGI_29438 Sequoiadendron giganteum HOM05D006513 ORTHO05D008150 2.0e-27 126.7 196 42.3
Nitab4.5_0017656g0020 Nicotiana tabacum HOM05D006513 ORTHO05D008150 4.1e-25 119.0 95 61.1
Mapoly0015s0101 Marchantia polymorpha HOM05D006513 ORTHO05D008150 4.5e-24 115.5 161 39.1
COL.COLO4_05780 Corchorus olitorius HOM05D006513 ORTHO05D008150 1.0e-23 114.4 86 64.0
AagrBONN_evm.TU.Sc2ySwM_340.153 Anthoceros agrestis HOM05D006513 ORTHO05D008150 1.5e-22 110.5 169 36.7
CBR_g6525 Chara braunii HOM05D006513 ORTHO05D008150 1.0e-20 104.4 126 41.3
Nitab4.5_0010819g0020 Nicotiana tabacum HOM05D005868 ORTHO05D006964 4.0e-20 102.4 91 62.6
TAR636G0633 Trochodendron aralioides HOM05D005966 ORTHO05D007584 1.8e-17 93.6 86 59.3
RcHm_v2.0_Chr7g0212941 Rosa chinensis HOM05D006513 ORTHO05D008150 2.4e-17 93.2 52 84.6
Rhsim02G0222800 Rhododendron simsii HOM05D006513 ORTHO05D008150 3.2e-14 82.8 75 56.0
TAR090G0005 Trochodendron aralioides HOM05D006513 ORTHO05D008150 3.0e-12 76.3 67 62.7
HPP92_027747 Vanilla planifolia HOM05D006513 ORTHO05D008150 1.2e-11 74.3 99 44.4
Pp3c25_13070 Physcomitrium patens HOM05D006513 ORTHO05D008150 4.9e-10 68.9 101 33.7
Cpa.g.sc75.50 Carica papaya HOM05D006513 ORTHO05D008150 7.7e-08 61.6 44 72.7
AUR62043674 Chenopodium quinoa HOM05D006513 ORTHO05D003876 1.3e-07 60.8 51 58.8


User provided reference genes

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