Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 3.9e-106 388.3 215 100.0
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 6.3e-80 301.2 221 81.4
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.1e-79 300.4 221 81.4
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 5.3e-79 298.1 221 80.5
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 2.7e-78 295.8 221 80.1
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.1e-71 271.9 172 89.0
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 7.7e-70 267.7 235 68.9
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 4.7e-67 258.5 230 69.1
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 1.0e-66 257.3 236 67.4
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 8.8e-66 254.2 226 67.3
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.8e-63 246.5 236 66.5
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 5.4e-63 245.0 230 64.3
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 9.2e-63 244.2 240 65.4
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 1.3e-61 240.4 237 64.6
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.7e-61 240.0 194 70.6
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 1.7e-61 240.0 236 64.8
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.3e-61 239.6 236 62.7
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 2.9e-61 239.2 242 61.2
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 5.0e-61 238.4 235 62.6
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 8.6e-61 237.7 233 64.8
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 1.9e-60 236.5 224 65.2
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.5e-60 236.1 213 65.3
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 5.6e-60 235.0 225 64.4
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 5.6e-60 235.0 236 62.3
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 7.3e-60 234.6 237 62.0
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 9.5e-60 234.2 233 63.9
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 1.2e-59 233.8 236 60.6
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 2.1e-59 233.0 234 62.8
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 2.1e-59 233.0 235 61.7
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 3.6e-59 232.3 236 61.9
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 3.6e-59 232.3 229 62.4
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 4.7e-59 231.9 238 60.5
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 4.7e-59 231.9 228 62.7
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 6.1e-59 231.5 220 64.5
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 1.0e-58 230.7 232 61.6
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 1.8e-58 229.9 203 67.0
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 2.3e-58 229.6 234 60.3
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 4.0e-58 228.8 236 61.0
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 4.0e-58 228.8 233 62.7
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 5.2e-58 228.4 228 62.3
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 5.2e-58 228.4 230 61.7
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 8.9e-58 227.6 235 61.7
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 1.5e-57 226.9 220 64.1
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 4.4e-57 225.3 202 64.4
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 5.7e-57 224.9 231 61.5
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 7.5e-57 224.6 231 61.5
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 9.8e-57 224.2 228 61.4
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 3.7e-56 222.2 220 62.3
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 6.4e-56 221.5 214 63.1
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 8.3e-56 221.1 228 61.8
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 2.4e-55 219.5 218 58.7
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 5.4e-55 218.4 217 58.5
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 7.0e-55 218.0 218 57.8
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 9.2e-55 217.6 233 60.1
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 9.2e-55 217.6 223 58.7
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 1.6e-54 216.9 224 58.9
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 2.7e-54 216.1 218 60.6
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.5e-54 215.7 229 60.7
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.5e-54 215.7 223 58.3
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.7e-53 213.4 230 58.3
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.9e-53 212.2 236 58.5
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 5.0e-53 211.8 233 57.9
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 6.6e-53 211.5 237 58.2
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 8.6e-53 211.1 220 60.9
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 1.9e-52 209.9 224 58.0
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 1.9e-52 209.9 223 58.3
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.5e-52 209.5 234 56.8
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.5e-52 209.5 232 56.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 3.6e-51 205.7 224 57.6
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 1.4e-50 203.8 241 52.3
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 8.9e-50 201.1 222 57.7
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 1.2e-49 200.7 202 59.4
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.5e-49 200.3 219 56.2
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 5.8e-49 198.4 222 55.0
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 5.8e-49 198.4 231 54.1
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 7.5e-49 198.0 194 60.3
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 1.7e-48 196.8 231 54.5
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 3.7e-48 195.7 170 64.7
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 3.7e-48 195.7 194 60.8
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 4.9e-48 195.3 147 73.5
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 8.3e-48 194.5 215 58.1
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.1e-47 194.1 217 58.5
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 1.9e-47 193.4 215 56.3
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 3.2e-47 192.6 210 57.6
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.4e-47 191.8 234 53.4
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 1.2e-46 190.7 225 58.2
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 1.2e-46 190.7 216 56.5
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 2.0e-46 189.9 218 56.4
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 2.7e-46 189.5 215 56.3
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 3.5e-46 189.1 218 56.4
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 7.8e-46 188.0 218 56.0
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 1.0e-45 187.6 216 55.6
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 5.0e-45 185.3 252 49.6
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 5.0e-45 185.3 272 47.4
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.0e-45 185.3 189 61.4
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.5e-44 183.7 159 66.0
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 1.9e-44 183.3 189 60.8
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 3.3e-44 182.6 212 56.6
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 5.6e-44 181.8 225 52.9
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 7.3e-44 181.4 172 61.6
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 6.2e-43 178.3 134 73.1
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 1.1e-42 177.6 172 55.8
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 5.2e-42 175.3 247 51.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 8.9e-42 174.5 170 59.4
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 2.6e-41 172.9 224 52.2
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 1.4e-39 167.2 168 57.7
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 7.8e-38 161.4 183 56.8
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 5.6e-36 155.2 196 51.5
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 9.5e-36 154.5 175 56.6
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 3.1e-34 149.4 166 57.2
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.0e-33 146.7 165 56.4
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 2.9e-32 142.9 195 53.8
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 2.4e-31 139.8 220 41.8
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.2e-30 137.5 140 59.3
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 1.2e-30 137.5 182 44.5
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 6.0e-30 135.2 128 62.5
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 1.5e-28 130.6 159 48.4
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 3.3e-28 129.4 128 59.4
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 5.2e-26 122.1 116 69.0
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 1.9e-23 113.6 144 44.4
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.1e-20 104.4 103 52.4
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 2.5e-20 103.2 111 51.4
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 3.4e-17 92.8 179 39.1
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.0e-13 81.3 75 58.7
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 2.7e-06 56.6 153 28.8


User provided reference genes

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