Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0087101 Rosa chinensis HOM05D008165 ORTHO05D007516 2.1e-46 189.5 170 100.0
FAN23G0205 Fragaria x ananassa HOM05D008165 ORTHO05D007516 9.5e-39 164.1 115 83.5
FAN26G1249 Fragaria x ananassa HOM05D008165 ORTHO05D007516 3.6e-38 162.2 170 86.5
FAN28G1178 Fragaria x ananassa HOM05D008165 ORTHO05D007516 3.3e-31 139.0 131 70.2
FvH4_1g02080 Fragaria vesca HOM05D008165 ORTHO05D007516 4.3e-31 138.7 80 87.5
FAN19G0448 Fragaria x ananassa HOM05D008165 ORTHO05D007516 4.3e-31 138.7 80 87.5
MD15G1162600 Malus domestica HOM05D008165 ORTHO05D007516 3.5e-25 119.0 84 75.0
MD02G1018600 Malus domestica HOM05D008165 ORTHO05D007516 7.8e-25 117.9 80 72.5
Prupe.7G252200 Prunus persica HOM05D008165 ORTHO05D007516 1.9e-23 113.2 109 69.7
QL02p090702 Quercus lobata HOM05D008165 ORTHO05D007516 2.8e-22 109.4 108 70.4
Cfa002265 Carpinus fangiana HOM05D008165 ORTHO05D007516 1.5e-15 87.0 106 65.1
Manes.14G119100 Manihot esculenta HOM05D008165 ORTHO05D007516 2.5e-15 86.3 78 59.0
Duzib150G0960 Durio zibethinus HOM05D008165 ORTHO05D007516 4.3e-15 85.5 77 55.8
Manes.06G044400 Manihot esculenta HOM05D008165 ORTHO05D007516 1.3e-14 84.0 78 57.7
Gohir.A05G013100 Gossypium hirsutum HOM05D008165 ORTHO05D007516 3.6e-14 82.4 75 56.0
Gohir.D05G014200 Gossypium hirsutum HOM05D008165 ORTHO05D007516 3.6e-14 82.4 77 55.8
Duzib168G0348 Durio zibethinus HOM05D008165 ORTHO05D007516 4.8e-14 82.0 78 56.4
Duzib187G0069 Durio zibethinus HOM05D008165 ORTHO05D007516 6.2e-14 81.6 73 57.5
Thecc.09G137200 Theobroma cacao HOM05D008165 ORTHO05D007516 6.2e-14 81.6 78 53.8
Gorai.009G014200 Gossypium raimondii HOM05D008165 ORTHO05D007516 1.4e-13 80.5 76 55.3
Rhsim03G0252900 Rhododendron simsii HOM05D008165 ORTHO05D007516 1.5e-12 77.0 69 55.1
PGSC0003DMG400007836 Solanum tuberosum HOM05D008165 ORTHO05D007516 5.8e-12 75.1 70 55.7
CsaV3_2G003340 Cucumis sativus L. HOM05D008165 ORTHO05D007516 9.9e-12 74.3 82 52.4
ClCG11G003470 Citrullus lanatus HOM05D008165 ORTHO05D007516 1.7e-11 73.6 72 55.6
Sopen12g004750 Solanum pennellii HOM05D008165 ORTHO05D007516 1.7e-11 73.6 70 54.3
MELO3C004479.2 Cucumis melo HOM05D008165 ORTHO05D007516 3.8e-11 72.4 83 50.6
MELO3C004482.2 Cucumis melo HOM05D008165 ORTHO05D007516 4.9e-11 72.0 78 47.4
CsaV3_2G003360 Cucumis sativus L. HOM05D008165 ORTHO05D007516 8.4e-11 71.2 78 47.4
Solyc12g009860.3 Solanum lycopersicum HOM05D008165 ORTHO05D007516 8.4e-11 71.2 70 54.3
THA.LOC104826562 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.1e-10 70.9 117 53.8
vmacro23527 Vaccinium macrocarpon HOM05D008165 ORTHO05D007516 1.9e-10 70.1 67 50.7
GSVIVG01012854001 Vitis vinifera HOM05D008165 ORTHO05D007516 1.9e-10 70.1 91 59.3
TAR626G1841 Trochodendron aralioides HOM05D008165 ORTHO05D007516 3.2e-10 69.3 86 50.0
TAR673G0004 Trochodendron aralioides HOM05D008165 ORTHO05D007516 4.2e-10 68.9 67 56.7
Atru.chr7.2009 Acer truncatum HOM05D008165 ORTHO05D007516 5.4e-10 68.6 79 44.3
Ah.14g079050 Amaranthus hybridus HOM05D008165 ORTHO05D007516 5.4e-10 68.6 78 48.7
ClCG11G003490 Citrullus lanatus HOM05D008165 ORTHO05D007516 5.4e-10 68.6 73 49.3
Lj9A703T45 Lonicera japonica HOM05D008165 ORTHO05D007516 5.4e-10 68.6 83 45.8
Hund21593 Selenicereus undatus HOM05D008165 ORTHO05D007516 5.4e-10 68.6 80 51.2
Glyma.17G107800 Glycine max HOM05D013093 ORTHO05D007516 1.2e-09 67.4 79 50.6
Prupe.1G484300 Prunus persica HOM05D014178 ORTHO05D007516 1.6e-09 67.0 84 46.4
Hma1.2p1_0343F.1_g130780 Hydrangea macrophylla HOM05D008165 ORTHO05D007516 2.1e-09 66.6 66 51.5
TAR383G0642 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.1e-09 66.6 65 56.9
TAR625G0094 Trochodendron aralioides HOM05D008165 ORTHO05D007516 2.7e-09 66.2 118 54.2
Glyma.13G163302 Glycine max HOM05D008165 ORTHO05D007516 1.0e-08 64.3 82 48.8
MD15G1129000 Malus domestica HOM05D014178 ORTHO05D007516 1.3e-08 63.9 85 47.1
TWI63G1030 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 1.8e-08 63.5 107 56.1
TWI63G1311 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 1.8e-08 63.5 107 56.1
Psat4g034960 Pisum sativum HOM05D013093 ORTHO05D007516 5.1e-08 62.0 79 45.6
Migut.J01244 Erythranthe guttata HOM05D008165 ORTHO05D007516 6.7e-08 61.6 70 51.4
Glyma.17G107600 Glycine max HOM05D008165 ORTHO05D007516 1.1e-07 60.8 82 48.8
Oeu055936.1 Olea europaea HOM05D008165 ORTHO05D007516 1.1e-07 60.8 77 49.4
THA.LOC104808953 Tarenaya hassleriana HOM05D010884 ORTHO05D012938 1.1e-07 60.8 79 48.1
Glyma.13G163100 Glycine max HOM05D013093 ORTHO05D007516 1.9e-07 60.1 76 48.7
CiPaw.07G225700 Carya illinoinensis HOM05D009923 ORTHO05D007516 2.5e-07 59.7 67 49.3
Dinv38142 Davidia involucrata HOM05D008165 ORTHO05D007516 2.5e-07 59.7 82 43.9
Oeu058579.1 Olea europaea HOM05D008165 ORTHO05D007516 2.5e-07 59.7 78 47.4
Hund09307 Selenicereus undatus HOM05D008165 ORTHO05D007516 3.3e-07 59.3 75 44.0
Nitab4.5_0008536g0060 Nicotiana tabacum HOM05D008165 ORTHO05D007516 4.3e-07 58.9 64 48.4
TWI34G2014 Tripterygium wilfordii HOM05D008165 ORTHO05D007516 4.3e-07 58.9 112 50.0
Duzib150G1536 Durio zibethinus HOM05D009923 ORTHO05D007516 5.6e-07 58.5 71 46.5
Sed0004036 Sechium edule HOM05D008165 ORTHO05D007516 5.6e-07 58.5 100 48.0
CiPaw.08G009200 Carya illinoinensis HOM05D009923 ORTHO05D007516 1.6e-06 57.0 68 47.1
MD08G1151900 Malus domestica HOM05D014178 ORTHO05D007516 1.6e-06 57.0 87 44.8
CSS0041528 Camellia sinensis var. sinensis HOM05D008165 ORTHO05D007516 2.1e-06 56.6 49 55.1
CAN.G467.3 Capsicum annuum HOM05D013625 ORTHO05D007516 2.8e-06 56.2 116 51.7
Thecc.09G021100 Theobroma cacao HOM05D009923 ORTHO05D007516 3.7e-06 55.8 71 45.1
GSVIVG01017457001 Vitis vinifera HOM05D009923 ORTHO05D007516 3.7e-06 55.8 62 48.4
Duzib168G1698 Durio zibethinus HOM05D009923 ORTHO05D007516 4.8e-06 55.5 70 44.3
Cc06_g07690 Coffea canephora HOM05D008165 ORTHO05D007516 6.2e-06 55.1 58 55.2
HanXRQChr06g0180411 Helianthus annuus HOM05D021640 ORTHO05D007516 6.2e-06 55.1 94 57.4
Nn8g39643 Nelumbo nucifera HOM05D008165 ORTHO05D007516 8.1e-06 54.7 82 40.2


User provided reference genes

Program Settings