Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr2g0085031 Rosa chinensis HOM05D002465 ORTHO05D005308 3.8e-42 174.5 91 100.0
RcHm_v2.0_Chr7g0179801 Rosa chinensis HOM05D002622 ORTHO05D002837 7.2e-09 63.9 37 89.2
FAN10G1194 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.6e-08 61.6 46 73.9
FAN10G1435 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.6e-08 61.6 46 73.9
RcHm_v2.0_Chr1g0378531 Rosa chinensis HOM05D002465 ORTHO05D005308 3.6e-08 61.6 46 73.9
FAN03G3136 Fragaria x ananassa HOM05D002465 ORTHO05D005308 4.7e-08 61.2 46 71.7
FAN08G2438 Fragaria x ananassa HOM05D002622 ORTHO05D002837 6.1e-08 60.8 37 83.8
RcHm_v2.0_Chr3g0497461 Rosa chinensis HOM05D002465 ORTHO05D005308 1.0e-07 60.1 46 71.7
FAN06G0430 Fragaria x ananassa HOM05D002465 ORTHO05D005308 1.4e-07 59.7 46 69.6
FvH4_7g30390 Fragaria vesca HOM05D002465 ORTHO05D005308 1.8e-07 59.3 46 67.4
Prupe.2G301900 Prunus persica HOM05D002465 ORTHO05D005308 3.0e-07 58.5 32 87.5
FAN06G3650 Fragaria x ananassa HOM05D002465 ORTHO05D005308 3.9e-07 58.2 46 67.4
MD01G1209800 Malus domestica HOM05D002465 ORTHO05D005308 6.7e-07 57.4 32 84.4
vmacro06621 Vaccinium macrocarpon HOM05D002465 ORTHO05D005308 2.6e-06 55.5 32 81.2
Rhsim03G0191700 Rhododendron simsii HOM05D002465 ORTHO05D005308 3.3e-06 55.1 32 78.1
FAN01G1269 Fragaria x ananassa HOM05D002465 ORTHO05D005308 5.7e-06 54.3 46 65.2
AUR62021107 Chenopodium quinoa HOM05D002465 ORTHO05D005308 7.4e-06 53.9 47 59.6
Actinidia34161 Actinidia chinensis HOM05D002465 ORTHO05D005308 9.7e-06 53.5 32 78.1
CSS0029570 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D005308 9.7e-06 53.5 32 78.1
Os07g0467900 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D005308 9.7e-06 53.5 32 78.1


User provided reference genes

Program Settings