Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0384651 Rosa chinensis HOM05D007570 ORTHO05D009365 1.3e-119 435.3 793 100.0
FvH4_7g02371 Fragaria vesca HOM05D007570 ORTHO05D009365 3.4e-75 287.7 788 87.3
FAN06G1073 Fragaria x ananassa HOM05D007570 ORTHO05D009365 3.8e-74 284.3 788 86.2
MD03G1142100 Malus domestica HOM05D007570 ORTHO05D009365 1.2e-48 199.5 339 62.5
FAN01G3111 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.6e-48 199.1 182 62.1
CiPaw.05G211100 Carya illinoinensis HOM05D007570 ORTHO05D009365 3.3e-41 174.9 367 58.3
Sabra19G0053700 Salix brachista HOM05D007570 ORTHO05D009365 7.0e-36 157.1 334 58.7
MD11G1161200 Malus domestica HOM05D007570 ORTHO05D009365 2.7e-35 155.2 186 48.4
Potri.019G043101 Populus trichocarpa HOM05D007570 ORTHO05D009365 1.0e-34 153.3 349 56.7
Thecc.05G226900 Theobroma cacao HOM05D007570 ORTHO05D009365 3.8e-34 151.4 307 61.6
Manes.08G159400 Manihot esculenta HOM05D007570 ORTHO05D009365 1.9e-33 149.1 350 60.0
Lalb_Chr16g0383631 Lupinus albus HOM05D007570 ORTHO05D009365 3.3e-33 148.3 301 59.8
Psat7g112960 Pisum sativum HOM05D007570 ORTHO05D009365 7.3e-33 147.1 343 57.7
Lj4g0005287 Lotus japonicus HOM05D007570 ORTHO05D009365 9.5e-33 146.7 357 56.0
Duzib106G0838 Durio zibethinus HOM05D007570 ORTHO05D009365 2.1e-32 145.6 346 56.9
Atru.chr6.18 Acer truncatum HOM05D007570 ORTHO05D009365 8.0e-32 143.7 298 61.4
arahy.Tifrunner.gnm1.ann1.3SI8EE Arachis hypogaea HOM05D000112 ORTHO05D009365 1.4e-31 142.9 303 60.4
arahy.Tifrunner.gnm1.ann1.K3ZWQ5 Arachis hypogaea HOM05D000112 ORTHO05D009365 1.4e-31 142.9 303 60.4
Ciclev10030585m.g Citrus clementina HOM05D007570 ORTHO05D009365 1.4e-31 142.9 361 54.8
TWI34G1038 Tripterygium wilfordii HOM05D007570 ORTHO05D009365 3.0e-31 141.7 307 60.3
Phvul.002G227100 Phaseolus vulgaris HOM05D007570 ORTHO05D009365 2.0e-30 139.0 304 61.2
TPR.G12015 Trifolium pratense HOM05D007570 ORTHO05D009365 2.0e-30 139.0 347 55.6
CANSAT78G1681 Cannabis sativa HOM05D007570 ORTHO05D009365 4.4e-30 137.9 334 55.7
Gohir.A01G216000 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.3e-29 136.3 341 54.8
Ca_18529_v3 Cicer arietinum L. HOM05D001301 ORTHO05D009365 2.2e-29 135.6 346 56.1
VMungo0251G2923 Vigna mungo HOM05D007570 ORTHO05D009365 4.9e-29 134.4 304 60.2
Gorai.002G249100 Gossypium raimondii HOM05D007570 ORTHO05D009365 1.1e-28 133.3 323 56.7
Gohir.D01G204800 Gossypium hirsutum HOM05D007570 ORTHO05D009365 1.4e-28 132.9 323 56.7
Glyma.07G194900 Glycine max HOM05D007570 ORTHO05D009365 4.1e-28 131.3 330 54.5
FAN10G4006 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.6e-27 129.4 518 94.4
Medtr4g089005 Medicago truncatula HOM05D007570 ORTHO05D009365 6.0e-27 127.5 305 59.0
Medtr8g064830 Medicago truncatula HOM05D007570 ORTHO05D009365 2.3e-26 125.6 303 59.1
FAN03G2441 Fragaria x ananassa HOM05D002709 ORTHO05D002914 1.9e-25 122.5 89 70.8
PGR031G1904 Punica granatum HOM05D007570 ORTHO05D009365 3.3e-25 121.7 190 39.5
FAN10G3422 Fragaria x ananassa HOM05D007570 ORTHO05D009365 1.2e-24 119.8 89 69.7
Eucgr.F03126 Eucalyptus grandis HOM05D007570 ORTHO05D009365 2.8e-24 118.6 302 57.0
Eucgr.A02378 Eucalyptus grandis HOM05D007570 ORTHO05D009365 7.5e-22 110.5 162 37.0
PSO210G6895 Papaver somniferum HOM05D007570 ORTHO05D009365 7.5e-22 110.5 143 44.1
PSO832G0129 Papaver somniferum HOM05D007570 ORTHO05D009365 9.8e-22 110.2 143 44.1
MD00G1202400 Malus domestica HOM05D007570 ORTHO05D009365 2.2e-21 109.0 348 53.4
CSS0011257 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 4.1e-20 104.8 315 41.3
Cfa016108 Carpinus fangiana HOM05D007570 ORTHO05D009365 7.8e-19 100.5 214 73.4
CSS0020002 Camellia sinensis var. sinensis HOM05D007570 ORTHO05D009365 1.0e-18 100.1 315 38.4
Sc11g0002770 Simmondsia chinensis HOM05D007570 ORTHO05D009365 1.0e-18 100.1 142 40.8
TAR625G0236 Trochodendron aralioides HOM05D007570 ORTHO05D009365 3.9e-18 98.2 153 63.4
Solyc01g099530.3 Solanum lycopersicum HOM05D001281 ORTHO05D001139 5.1e-18 97.8 198 36.4
Dinv40321 Davidia involucrata HOM05D007570 ORTHO05D009365 6.6e-18 97.4 358 32.1
Nitab4.5_0002344g0040 Nicotiana tabacum HOM05D007570 ORTHO05D009365 1.5e-17 96.3 192 35.4
Aqoxy5G04288 Aquilegia oxysepala HOM05D007570 ORTHO05D009365 2.5e-17 95.5 346 51.4
Peaxi162Scf00037g01028 Petunia axillaris HOM05D007570 ORTHO05D009365 2.5e-17 95.5 139 41.7
Ah.10g033640 Amaranthus hybridus HOM05D007570 ORTHO05D009365 7.3e-17 94.0 172 34.9
Nitab4.5_0008329g0060 Nicotiana tabacum HOM05D001281 ORTHO05D009365 7.3e-17 94.0 138 38.4
Prupe.2G007100 Prunus persica HOM05D007570 ORTHO05D009365 7.3e-17 94.0 74 64.9
Hund19367 Selenicereus undatus HOM05D007570 ORTHO05D009365 9.5e-17 93.6 319 31.3
Lj5C421G19 Lonicera japonica HOM05D007570 ORTHO05D009365 2.8e-16 92.0 159 35.2
Cc02_g33170 Coffea canephora HOM05D007570 ORTHO05D009365 4.7e-16 91.3 305 29.8
Hma1.2p1_1374F.1_g278810 Hydrangea macrophylla HOM05D007570 ORTHO05D009365 8.1e-16 90.5 274 37.6
MD11G1161100 Malus domestica HOM05D007570 ORTHO05D009365 5.2e-15 87.8 147 59.9
MD00G1202300 Malus domestica HOM05D007570 ORTHO05D009365 6.8e-15 87.4 147 64.6
Lsat_1_v5_gn_5_103340 Lactuca sativa HOM05D007570 ORTHO05D009365 8.9e-15 87.0 136 37.5
Nn1g08626 Nelumbo nucifera HOM05D007570 ORTHO05D009365 9.9e-14 83.6 158 33.5
Sp6g29270 Schrenkiella parvula HOM05D007570 ORTHO05D009365 2.9e-13 82.0 165 44.2
Haze_00350 Corylus avellana HOM05D007570 ORTHO05D009365 4.9e-13 81.3 97 52.6
Thhalv10012597m.g Eutrema salsugineum HOM05D007570 ORTHO05D009365 6.4e-13 80.9 144 41.7
Rhsim07G0187500 Rhododendron simsii HOM05D001660 ORTHO05D003277 8.3e-13 80.5 330 30.0
Sopen01g043040 Solanum pennellii HOM05D007570 ORTHO05D009365 3.2e-12 78.6 145 35.2
HPP92_020822 Vanilla planifolia HOM05D007570 ORTHO05D009365 3.2e-12 78.6 145 35.9
AL6G25570 Arabidopsis lyrata HOM05D007570 ORTHO05D009365 7.1e-12 77.4 166 42.2
PGSC0003DMG400024750 Solanum tuberosum HOM05D007570 ORTHO05D009365 7.1e-12 77.4 145 34.5
Cpa.g.sc909.2 Carica papaya HOM05D007570 ORTHO05D009365 2.7e-11 75.5 48 66.7
BcaB08g36948 Brassica carinata HOM05D007570 ORTHO05D009365 4.6e-11 74.7 171 40.4
MSTRG.27980 Avicennia marina HOM05D007570 ORTHO05D009365 8.6e-10 70.5 195 27.7
Actinidia35565 Actinidia chinensis HOM05D007570 ORTHO05D009365 1.9e-09 69.3 147 74.8
Migut.O00416 Erythranthe guttata HOM05D007570 ORTHO05D009365 3.3e-09 68.6 190 28.9
BolC9t59076H Brassica oleracea HOM05D007570 ORTHO05D009365 7.3e-09 67.4 137 46.0
BcaC04g19010 Brassica carinata HOM05D007570 ORTHO05D009365 9.5e-09 67.0 137 46.0
CAN.G665.19 Capsicum annuum HOM05D007570 ORTHO05D009365 2.8e-08 65.5 186 26.3
Oeu043366.2 Olea europaea HOM05D007570 ORTHO05D009365 2.8e-08 65.5 46 58.7
A10p23910 Brassica napus HOM05D007570 ORTHO05D009365 6.2e-08 64.3 137 46.0
BraA10t44455Z Brassica rapa HOM05D007570 ORTHO05D009365 6.2e-08 64.3 137 46.0
GSVIVG01013840001 Vitis vinifera HOM05D007570 ORTHO05D009365 8.1e-08 63.9 46 58.7
C09p62380 Brassica napus HOM05D007570 ORTHO05D009365 1.1e-07 63.5 137 43.8
CARHR198540 Cardamine hirsuta HOM05D007570 ORTHO05D009365 1.1e-07 63.5 150 39.3
Lj5C430G10 Lonicera japonica HOM05D007570 ORTHO05D009365 1.4e-07 63.2 44 56.8
AUR62028022 Chenopodium quinoa HOM05D007570 ORTHO05D009365 2.4e-07 62.4 221 42.5
ECA234G3939 Erigeron canadensis HOM05D007570 ORTHO05D009365 2.4e-07 62.4 44 56.8
Migut.N02077 Erythranthe guttata HOM05D007570 ORTHO05D009365 2.4e-07 62.4 173 30.6
Carub.0006s1294 Capsella rubella HOM05D007570 ORTHO05D009365 6.8e-07 60.8 142 37.3
HanXRQChr10g0294781 Helianthus annuus HOM05D007570 ORTHO05D009365 6.8e-07 60.8 45 55.6
Glyma.13G181601 Glycine max HOM05D007570 ORTHO05D009365 8.9e-07 60.5 46 58.7
DCAR_001944 Daucus carota HOM05D007570 ORTHO05D009365 2.0e-06 59.3 49 51.0
SalBow3G4252 Salvia bowleyana HOM05D007570 ORTHO05D009365 2.6e-06 58.9 46 50.0
SalBow3G3428 Salvia bowleyana HOM05D007570 ORTHO05D009365 5.8e-06 57.8 150 32.0


User provided reference genes

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