Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0383741 Rosa chinensis HOM05D007456 ORTHO05D009411 3.6e-40 169.1 80 100.0
Lj1C1032G4 Lonicera japonica HOM05D007456 ORTHO05D009411 5.8e-22 108.6 80 63.8
Atru.BG.267.p Acer truncatum HOM05D007456 ORTHO05D009411 4.6e-19 99.0 70 68.6
Sp7g05790 Schrenkiella parvula HOM05D007456 ORTHO05D009411 8.6e-18 94.7 80 53.8
Thhalv10004016m.g Eutrema salsugineum HOM05D007456 ORTHO05D009411 1.9e-17 93.6 79 53.2
A04p10240 Brassica napus HOM05D007456 ORTHO05D009411 5.6e-17 92.0 80 53.8
BraA04t16690Z Brassica rapa HOM05D007456 ORTHO05D009411 5.6e-17 92.0 80 53.8
BcaC02g09523 Brassica carinata HOM05D007456 ORTHO05D009411 7.3e-17 91.7 80 53.8
C04p43710 Brassica napus HOM05D007456 ORTHO05D009411 7.3e-17 91.7 80 53.8
BolC4t25953H Brassica oleracea HOM05D007456 ORTHO05D009411 7.3e-17 91.7 80 53.8
HanXRQChr14g0431021 Helianthus annuus HOM05D007456 ORTHO05D009411 2.8e-16 89.7 65 66.2
BcaB06g27033 Brassica carinata HOM05D007456 ORTHO05D009411 3.6e-16 89.4 80 51.2
Aqoxy245s002 Aquilegia oxysepala HOM05D007456 ORTHO05D009411 9.8e-14 81.3 54 68.5
Lj9A258G53 Lonicera japonica HOM05D007456 ORTHO05D009411 3.2e-12 76.3 50 68.0
MD07G1304900 Malus domestica HOM05D007456 ORTHO05D009411 3.2e-12 76.3 44 81.8
Rhsim03G0219800 Rhododendron simsii HOM05D007456 ORTHO05D009411 4.6e-11 72.4 41 73.2
AL7G45310 Arabidopsis lyrata HOM05D007456 ORTHO05D009411 1.0e-10 71.2 57 57.9
THA.LOC104823813 Tarenaya hassleriana HOM05D007456 ORTHO05D009411 6.6e-10 68.6 48 62.5
Cpa.g.sc252.22 Carica papaya HOM05D007456 ORTHO05D009411 1.6e-08 63.9 48 58.3
MELO3C017621.2 Cucumis melo HOM05D007456 ORTHO05D009411 1.6e-08 63.9 42 66.7
Actinidia02801 Actinidia chinensis HOM05D007456 ORTHO05D009411 1.8e-07 60.5 49 59.2
GSVIVG01024456001 Vitis vinifera HOM05D007456 ORTHO05D009411 1.5e-06 57.4 32 78.1
CDE11G0312 Ceratophyllum demersum HOM05D007456 ORTHO05D009411 2.0e-06 57.0 27 88.9


User provided reference genes

Program Settings