Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0381021 Rosa chinensis HOM05D007326 ORTHO05D009048 1.7e-67 259.2 135 100.0
FAN06G2911 Fragaria x ananassa HOM05D007326 ORTHO05D009048 9.9e-31 137.1 107 69.2
FAN03G0879 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.2e-28 130.2 107 66.4
FAN10G1221 Fragaria x ananassa HOM05D007326 ORTHO05D009048 1.3e-22 110.2 100 64.0
FAN10G2940 Fragaria x ananassa HOM05D007326 ORTHO05D009048 6.4e-22 107.8 100 63.0
FvH4_7g31800 Fragaria vesca HOM05D000354 ORTHO05D000717 1.9e-21 106.3 76 68.4
FAN01G1037 Fragaria x ananassa HOM05D007326 ORTHO05D009048 2.3e-19 99.4 107 57.0
Prupe.2G311900 Prunus persica HOM05D007326 ORTHO05D009048 4.5e-15 85.1 109 50.5
vmacro06547 Vaccinium macrocarpon HOM05D007326 ORTHO05D009048 3.5e-12 75.5 113 47.8
Atru.chr1.147 Acer truncatum HOM05D007326 ORTHO05D009048 7.9e-12 74.3 104 50.0
ClCG01G000490 Citrullus lanatus HOM05D007326 ORTHO05D009048 1.0e-11 73.9 109 47.7
Rhsim09G0011500 Rhododendron simsii HOM05D007326 ORTHO05D009048 1.8e-11 73.2 103 46.6
TAR629G0302 Trochodendron aralioides HOM05D007326 ORTHO05D009048 3.0e-11 72.4 118 41.5
TPR.G14875 Trifolium pratense HOM05D007326 ORTHO05D009048 3.9e-11 72.0 117 44.4
Gohir.A11G014200 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.1e-10 70.5 108 44.4
Gohir.D11G014400 Gossypium hirsutum HOM05D007326 ORTHO05D009048 1.9e-10 69.7 108 45.4
Gorai.007G014800 Gossypium raimondii HOM05D007326 ORTHO05D009048 1.9e-10 69.7 108 45.4
Glyma.09G190100 Glycine max HOM05D007326 ORTHO05D009048 3.3e-10 68.9 102 48.0
Glyma.07G086800 Glycine max HOM05D007326 ORTHO05D009048 4.3e-10 68.6 87 49.4
Psat0s2030g0040 Pisum sativum HOM05D007326 ORTHO05D009048 4.3e-10 68.6 112 46.4
PGR042G3637 Punica granatum HOM05D007326 ORTHO05D009048 4.3e-10 68.6 102 46.1
Sed0023316 Sechium edule HOM05D007326 ORTHO05D009048 4.3e-10 68.6 107 45.8
Haze_14278 Corylus avellana HOM05D007326 ORTHO05D009048 7.4e-10 67.8 114 41.2
VMungo0464G1195 Vigna mungo HOM05D007326 ORTHO05D009048 7.4e-10 67.8 87 48.3
ECA232G0297 Erigeron canadensis HOM05D007326 ORTHO05D009048 9.6e-10 67.4 101 44.6
Ciclev10006260m.g Citrus clementina HOM05D007326 ORTHO05D009048 1.3e-09 67.0 106 44.3
COL.COLO4_03426 Corchorus olitorius HOM05D007326 ORTHO05D009048 1.6e-09 66.6 84 50.0
Oeu037093.1 Olea europaea HOM05D007326 ORTHO05D009048 4.8e-09 65.1 101 46.5
CsaV3_5G000570 Cucumis sativus L. HOM05D007326 ORTHO05D009048 8.2e-09 64.3 107 45.8
SGA_v2.0_scaffold55G19762 Striga asiatica HOM05D007326 ORTHO05D009048 8.2e-09 64.3 100 43.0
Manes.06G159200 Manihot esculenta HOM05D007326 ORTHO05D009048 2.4e-08 62.8 112 40.2
Medtr3g109290 Medicago truncatula HOM05D007326 ORTHO05D009048 3.1e-08 62.4 28 85.7
Rhsim03G0206100 Rhododendron simsii HOM05D043765 ORTHO05D009048 3.1e-08 62.4 95 47.4
Solyc03g083450.1 Solanum lycopersicum HOM05D007326 ORTHO05D009048 3.1e-08 62.4 112 39.3
Dinv29296 Davidia involucrata HOM05D007326 ORTHO05D009048 4.0e-08 62.0 87 42.5
unitig_8.g3560 Utricularia gibba HOM05D000146 ORTHO05D000178 4.0e-08 62.0 109 36.7
Rhsim03G0207100 Rhododendron simsii HOM05D043765 ORTHO05D009048 5.3e-08 61.6 95 47.4
SGA_v2.0_scaffold105G30435 Striga asiatica HOM05D007326 ORTHO05D009048 5.3e-08 61.6 100 42.0
arahy.Tifrunner.gnm1.ann1.8E5M3M Arachis hypogaea HOM05D007326 ORTHO05D009048 6.9e-08 61.2 111 41.4
Peaxi162Scf00550g00426 Petunia axillaris HOM05D007326 ORTHO05D009048 6.9e-08 61.2 87 41.4
Potri.015G017700 Populus trichocarpa HOM05D007326 ORTHO05D009048 9.0e-08 60.8 93 38.7
MELO3C005879.2 Cucumis melo HOM05D007326 ORTHO05D009048 1.2e-07 60.5 107 42.1
Nitab4.5_0002492g0030 Nicotiana tabacum HOM05D007326 ORTHO05D009048 1.2e-07 60.5 109 41.3
Actinidia06160 Actinidia chinensis HOM05D007326 ORTHO05D009048 1.5e-07 60.1 89 46.1
ATR0762G055 Amborella trichopoda HOM05D007326 ORTHO05D009048 2.0e-07 59.7 76 46.1
Duzib205G1092 Durio zibethinus HOM05D007326 ORTHO05D009048 2.0e-07 59.7 109 43.1
PGSC0003DMG400009118 Solanum tuberosum HOM05D007326 ORTHO05D009048 2.0e-07 59.7 83 48.2
Lsat_1_v5_gn_9_58181 Lactuca sativa HOM05D007326 ORTHO05D009048 2.6e-07 59.3 108 40.7
MBI06_g08457_MAGBIO Magnolia biondii HOM05D007326 ORTHO05D009048 3.4e-07 58.9 115 39.1
arahy.Tifrunner.gnm1.ann1.SUR8QF Arachis hypogaea HOM05D007326 ORTHO05D009048 4.5e-07 58.5 115 39.1
MSTRG.55 Avicennia marina HOM05D007326 ORTHO05D009048 4.5e-07 58.5 109 40.4
Nitab4.5_0000714g0090 Nicotiana tabacum HOM05D007326 ORTHO05D009048 4.5e-07 58.5 84 45.2
Sopen03g023220 Solanum pennellii HOM05D007326 ORTHO05D009048 4.5e-07 58.5 110 39.1
Hma1.2p1_0538F.1_g174400 Hydrangea macrophylla HOM05D007326 ORTHO05D009048 5.8e-07 58.2 118 39.0
CANSAT21G2203 Cannabis sativa HOM05D007326 ORTHO05D009048 7.6e-07 57.8 103 42.7
CDE05G0016 Ceratophyllum demersum HOM05D007326 ORTHO05D009048 7.6e-07 57.8 47 55.3
Aqoxy7G00103 Aquilegia oxysepala HOM05D007326 ORTHO05D009048 1.0e-06 57.4 118 40.7
CiPaw.06G009800 Carya illinoinensis HOM05D007326 ORTHO05D009048 1.0e-06 57.4 116 36.2
Manes.05G205250 Manihot esculenta HOM05D007326 ORTHO05D009048 1.7e-06 56.6 96 38.5
Thecc.03G195600 Theobroma cacao HOM05D007326 ORTHO05D009048 1.7e-06 56.6 89 40.4
Phvul.004G162900 Phaseolus vulgaris HOM05D007326 ORTHO05D009048 2.2e-06 56.2 24 95.8
Eucgr.A01472 Eucalyptus grandis HOM05D007326 ORTHO05D009048 2.9e-06 55.8 26 80.8
CSS0006442 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 3.8e-06 55.5 114 37.7
CAN.G108.61 Capsicum annuum HOM05D007326 ORTHO05D009048 4.9e-06 55.1 107 37.4
Oeu030278.1 Olea europaea HOM05D007326 ORTHO05D009048 4.9e-06 55.1 105 38.1
Pp3c23_5100 Physcomitrium patens HOM05D007326 ORTHO05D009048 4.9e-06 55.1 78 44.9
TWI23G0901 Tripterygium wilfordii HOM05D007326 ORTHO05D009048 4.9e-06 55.1 88 42.0
CSS0025602 Camellia sinensis var. sinensis HOM05D007326 ORTHO05D009048 6.5e-06 54.7 114 37.7
Os06g0157800 Oryza sativa ssp. japonica HOM05D007326 ORTHO05D009048 6.5e-06 54.7 26 80.8
AL8G43810 Arabidopsis lyrata HOM05D007326 ORTHO05D009048 8.4e-06 54.3 26 80.8
Nn4g24310 Nelumbo nucifera HOM05D000291 ORTHO05D009048 8.4e-06 54.3 105 40.0


User provided reference genes

Program Settings