Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0379941 Rosa chinensis HOM05D008398 ORTHO05D005682 3.8e-243 844.3 411 100.0
RcHm_v2.0_Chr1g0379901 Rosa chinensis HOM05D008398 ORTHO05D005682 2.6e-223 778.5 411 93.4
FvH4_5g34640 Fragaria vesca HOM05D008398 ORTHO05D005682 2.0e-82 310.5 422 48.3
FAN05G0770 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.2e-73 280.4 438 45.7
FvH4_6g50450 Fragaria vesca HOM05D008398 ORTHO05D005682 3.5e-71 273.1 445 42.2
FAN18G3618 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.0e-71 272.3 425 44.5
FAN14G4819 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.5e-69 267.7 447 41.2
FvH4_7g30461 Fragaria vesca HOM05D008398 ORTHO05D035411 1.0e-62 245.0 412 41.5
FAN06G0523 Fragaria x ananassa HOM05D008398 ORTHO05D005682 8.7e-62 241.9 411 41.1
FAN10G3871 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.8e-60 236.9 420 41.0
FAN10G3441 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.4e-59 233.8 419 40.8
FvH4_7g30481 Fragaria vesca HOM05D008398 ORTHO05D029520 1.2e-58 231.5 418 40.2
FAN09G2688 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.7e-55 220.3 353 46.2
FAN03G3290 Fragaria x ananassa HOM05D005400 ORTHO05D006668 1.9e-53 214.2 415 40.0
FAN14G5053 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.6e-52 211.1 321 46.1
FAN14G2930 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.0e-49 201.8 428 40.0
FvH4_6g28610 Fragaria vesca HOM05D008398 ORTHO05D005682 2.9e-49 200.3 285 48.1
FAN03G1797 Fragaria x ananassa HOM05D008398 ORTHO05D029520 4.9e-49 199.5 341 40.8
FAN03G3131 Fragaria x ananassa HOM05D008398 ORTHO05D029520 4.9e-49 199.5 341 40.8
FAN01G0388 Fragaria x ananassa HOM05D008398 ORTHO05D035411 1.4e-48 198.0 342 40.9
FAN06G1253 Fragaria x ananassa HOM05D008398 ORTHO05D035236 9.3e-48 195.3 410 39.0
FAN06G3627 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.6e-47 193.0 311 44.1
FAN01G2543 Fragaria x ananassa HOM05D008398 ORTHO05D046348 6.0e-47 192.6 358 40.8
FvH4_7g30470 Fragaria vesca HOM05D008398 ORTHO05D046348 2.3e-46 190.7 365 40.0
FAN01G0845 Fragaria x ananassa HOM05D008398 ORTHO05D029520 5.1e-46 189.5 341 40.2
FAN06G1826 Fragaria x ananassa HOM05D008398 ORTHO05D035236 4.8e-44 183.0 424 37.7
FAN15G2539 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.1e-43 181.8 419 38.2
FAN10G3802 Fragaria x ananassa HOM05D008398 ORTHO05D035411 5.3e-43 179.5 342 39.8
FAN06G0070 Fragaria x ananassa HOM05D008398 ORTHO05D029494 1.5e-42 177.9 437 36.8
FAN06G2579 Fragaria x ananassa HOM05D008398 ORTHO05D029494 1.5e-42 177.9 437 36.8
FvH4_7g12650 Fragaria vesca HOM05D008398 ORTHO05D029494 2.6e-42 177.2 437 36.8
FAN01G2094 Fragaria x ananassa HOM05D008398 ORTHO05D029494 5.9e-42 176.0 439 36.7
FvH4_7g16534 Fragaria vesca HOM05D008398 ORTHO05D046322 7.2e-40 169.1 422 36.0
FvH4_7g30731 Fragaria vesca HOM05D008398 ORTHO05D035236 1.0e-38 165.2 346 40.2
FAN10G0863 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.4e-35 154.8 276 43.1
FvH4_5g06100 Fragaria vesca HOM05D008398 ORTHO05D005682 1.8e-35 154.5 194 51.5
FAN05G1573 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.5e-34 149.8 213 48.4
FvH4_4g36820 Fragaria vesca HOM05D008398 ORTHO05D005682 8.5e-33 145.6 316 35.8
FAN06G2795 Fragaria x ananassa HOM05D008398 ORTHO05D046322 9.4e-32 142.1 356 36.2
RcHm_v2.0_Chr1g0376501 Rosa chinensis HOM05D008398 ORTHO05D005682 3.6e-31 140.2 371 34.5
FAN02G2570 Fragaria x ananassa HOM05D008398 ORTHO05D005682 5.1e-30 136.3 560 28.4
FAN03G2566 Fragaria x ananassa HOM05D008398 ORTHO05D005682 6.7e-30 136.0 201 43.8
FvH4_7g16480 Fragaria vesca HOM05D008398 ORTHO05D046080 4.8e-28 129.8 341 36.4
FAN01G2752 Fragaria x ananassa HOM05D008398 ORTHO05D005682 4.1e-27 126.7 233 41.2
FvH4_5g09240 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-26 124.4 341 31.4
FAN03G1279 Fragaria x ananassa HOM05D008398 ORTHO05D005682 3.4e-26 123.6 177 45.8
RcHm_v2.0_Chr7g0225411 Rosa chinensis HOM05D006732 ORTHO05D005682 4.5e-26 123.2 362 31.5
RcHm_v2.0_Chr2g0090631 Rosa chinensis HOM05D006732 ORTHO05D005682 5.9e-26 122.9 420 28.8
FAN08G0591 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.0e-25 122.1 341 31.4
FvH4_1g07310 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-25 121.3 332 30.7
FvH4_1g07350 Fragaria vesca HOM05D006732 ORTHO05D005682 1.7e-25 121.3 332 30.7
FAN19G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.9e-25 120.6 341 32.0
FvH4_1g04980 Fragaria vesca HOM05D006732 ORTHO05D005682 8.5e-25 119.0 341 31.7
FAN18G2797 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-25 119.0 367 30.2
FvH4_6g28541 Fragaria vesca HOM05D008398 ORTHO05D005682 1.9e-24 117.9 268 39.2
FAN06G3071 Fragaria x ananassa HOM05D008398 ORTHO05D046080 2.5e-24 117.5 341 35.2
FAN23G0359 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-23 114.0 341 31.1
FvH4_1g04982 Fragaria vesca HOM05D006732 ORTHO05D005682 7.9e-23 112.5 422 28.4
FAN26G0599 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.8e-22 111.3 448 27.9
FAN23G0913 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.7e-22 109.4 359 31.8
RcHm_v2.0_Chr2g0090681 Rosa chinensis HOM05D006732 ORTHO05D005682 8.8e-22 109.0 412 28.6
FAN23G1322 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.1e-21 108.6 438 30.1
FAN14G3968 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.4e-21 105.9 164 41.5
FvH4_1g04981 Fragaria vesca HOM05D006732 ORTHO05D005682 9.7e-21 105.5 438 29.9
FAN19G2793 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.3e-20 105.1 357 31.7
FAN19G0447 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.7e-20 103.6 425 29.4
RcHm_v2.0_Chr2g0088891 Rosa chinensis HOM05D006732 ORTHO05D005682 1.4e-19 101.7 446 26.7
FAN26G0545 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.2e-18 98.6 413 27.6
FvH4_1g04892 Fragaria vesca HOM05D006732 ORTHO05D005682 2.0e-18 97.8 424 29.2
FvH4_1g04870 Fragaria vesca HOM05D006732 ORTHO05D005682 1.0e-17 95.5 421 29.0
FAN06G2718 Fragaria x ananassa HOM05D008398 ORTHO05D005682 1.0e-17 95.5 272 30.9
FvH4_1g04650 Fragaria vesca HOM05D006732 ORTHO05D005682 8.5e-17 92.4 409 26.9
FAN13G2469 Fragaria x ananassa HOM05D006732 ORTHO05D005682 1.5e-16 91.7 308 28.9
FAN19G1839 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-15 87.4 394 26.4
FAN05G1364 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.6e-15 87.0 317 30.0
MD02G1004600 Malus domestica HOM05D006732 ORTHO05D005682 1.0e-14 85.5 378 27.0
FvH4_1g03800 Fragaria vesca HOM05D006732 ORTHO05D005682 1.8e-14 84.7 346 27.2
Prupe.7G110000 Prunus persica HOM05D006732 ORTHO05D005682 1.5e-13 81.6 286 31.1
FAN03G1911 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.0e-13 81.3 433 24.9
FvH4_1g03870 Fragaria vesca HOM05D006732 ORTHO05D005682 3.3e-13 80.5 304 30.6
FAN14G2290 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.3e-12 76.3 276 31.2
QL02p078454 Quercus lobata HOM05D006732 ORTHO05D005682 1.1e-11 75.5 164 32.9
FvH4_1g03650 Fragaria vesca HOM05D006732 ORTHO05D005682 2.4e-11 74.3 342 26.6
FvH4_7g31682 Fragaria vesca HOM05D010677 ORTHO05D012678 5.3e-11 73.2 291 25.8
FAN14G3920 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.0e-11 72.8 174 40.2
FAN19G1442 Fragaria x ananassa HOM05D006732 ORTHO05D005682 9.1e-11 72.4 298 29.9
FvH4_7g31670 Fragaria vesca HOM05D010677 ORTHO05D012678 5.9e-10 69.7 292 28.1
FvH4_7g28941 Fragaria vesca HOM05D006732 ORTHO05D005682 7.7e-10 69.3 143 35.7
FAN05G2135 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.7e-10 69.3 177 37.3
FAN03G3389 Fragaria x ananassa HOM05D010677 ORTHO05D012678 1.7e-09 68.2 275 29.1
Prupe.2G176100 Prunus persica HOM05D006732 ORTHO05D005682 5.0e-09 66.6 253 30.8
FAN26G1230 Fragaria x ananassa HOM05D006732 ORTHO05D005682 8.5e-09 65.9 204 29.4
FvH4_7g31320 Fragaria vesca HOM05D010677 ORTHO05D012678 1.5e-08 65.1 315 29.8
FAN11G1254 Fragaria x ananassa HOM05D000588 ORTHO05D000637 2.5e-08 64.3 72 47.2
FAN19G1133 Fragaria x ananassa HOM05D006732 ORTHO05D005682 3.2e-08 63.9 348 25.0
FAN02G2044 Fragaria x ananassa HOM05D008398 ORTHO05D005682 7.2e-08 62.8 81 48.1
Prupe.6G029800 Prunus persica HOM05D006732 ORTHO05D005682 1.6e-07 61.6 219 28.8
FAN05G3589 Fragaria x ananassa HOM05D008398 ORTHO05D005682 2.7e-07 60.8 179 27.9
FAN23G0775 Fragaria x ananassa HOM05D006732 ORTHO05D005682 2.7e-07 60.8 360 25.0
QL02p081954 Quercus lobata HOM05D006732 ORTHO05D005682 4.7e-07 60.1 182 33.5
FAN19G1560 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-06 56.2 161 31.1
FAN19G2470 Fragaria x ananassa HOM05D006732 ORTHO05D005682 6.8e-06 56.2 173 30.6


User provided reference genes

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