Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0379651 Rosa chinensis HOM05D005766 ORTHO05D007002 5.6e-127 457.6 229 100.0
FvH4_7g30700 Fragaria vesca HOM05D005766 ORTHO05D007002 4.3e-87 325.1 173 93.6
Prupe.2G304700 Prunus persica HOM05D005766 ORTHO05D007002 1.2e-81 307.0 173 86.7
MD07G1282600 Malus domestica HOM05D005766 ORTHO05D007002 4.7e-81 305.1 169 88.8
FAN03G2278 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.3e-80 302.8 159 95.0
FAN06G1885 Fragaria x ananassa HOM05D005766 ORTHO05D007002 2.3e-80 302.8 159 95.0
FAN01G0765 Fragaria x ananassa HOM05D005766 ORTHO05D007002 6.7e-80 301.2 159 94.3
MD01G1212200 Malus domestica HOM05D005766 ORTHO05D007002 8.8e-80 300.8 167 88.0
FAN06G2288 Fragaria x ananassa HOM05D005766 ORTHO05D007002 1.5e-79 300.1 159 94.3
FAN10G0167 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.3e-79 298.9 159 93.7
FAN10G3945 Fragaria x ananassa HOM05D005766 ORTHO05D007002 3.3e-79 298.9 159 93.7
TAR629G2087 Trochodendron aralioides HOM05D005766 ORTHO05D007002 9.7e-79 297.4 187 75.9
Atru.chr1.316 Acer truncatum HOM05D005766 ORTHO05D007002 6.3e-78 294.7 174 81.0
QL11p056568 Quercus lobata HOM05D005766 ORTHO05D007002 6.3e-78 294.7 175 79.4
Nn1g01746 Nelumbo nucifera HOM05D005766 ORTHO05D007002 7.7e-76 287.7 177 76.8
Manes.14G020100 Manihot esculenta HOM05D005766 ORTHO05D007002 3.8e-75 285.4 173 79.2
CANSAT21G0601 Cannabis sativa HOM05D005766 ORTHO05D007002 5.0e-75 285.0 173 79.2
Cfa016332 Carpinus fangiana HOM05D005766 ORTHO05D007002 3.2e-74 282.3 173 78.0
TWI39G0494 Tripterygium wilfordii HOM05D005766 ORTHO05D007002 4.2e-74 282.0 173 78.0
PGR004G1861 Punica granatum HOM05D005766 ORTHO05D007002 2.1e-73 279.6 174 75.9
Lj1A1010T47 Lonicera japonica HOM05D005766 ORTHO05D007002 2.7e-73 279.3 182 74.2
PSO170G0163 Papaver somniferum HOM05D005766 ORTHO05D007002 8.0e-73 277.7 173 75.7
vmacro06594 Vaccinium macrocarpon HOM05D005766 ORTHO05D007002 1.0e-72 277.3 175 74.9
Rhsim03G0196600 Rhododendron simsii HOM05D005766 ORTHO05D007002 1.8e-72 276.6 179 74.3
CsaV3_3G021770 Cucumis sativus L. HOM05D005766 ORTHO05D007002 2.3e-72 276.2 173 73.4
Duzib205G0439 Durio zibethinus HOM05D005766 ORTHO05D007002 3.0e-72 275.8 173 74.0
Thecc.03G188900 Theobroma cacao HOM05D005766 ORTHO05D007002 3.0e-72 275.8 173 75.7
Sabra15G0019200 Salix brachista HOM05D005766 ORTHO05D007002 2.0e-71 273.1 198 66.2
Sabra15G0021700 Salix brachista HOM05D005766 ORTHO05D007002 2.0e-71 273.1 198 66.2
GSVIVG01028775001 Vitis vinifera HOM05D005766 ORTHO05D007002 2.0e-71 273.1 163 79.1
Sed0015140 Sechium edule HOM05D005766 ORTHO05D007002 2.6e-71 272.7 173 72.8
Haze_00083 Corylus avellana HOM05D005766 ORTHO05D007002 2.8e-70 269.2 167 77.8
MELO3C006963.2 Cucumis melo HOM05D005766 ORTHO05D007002 3.7e-70 268.9 173 72.3
Gohir.A12G254600 Gossypium hirsutum HOM05D005766 ORTHO05D007002 4.8e-70 268.5 173 74.0
Gohir.D12G254700 Gossypium hirsutum HOM05D005766 ORTHO05D007002 6.3e-70 268.1 173 74.0
Hund04814 Selenicereus undatus HOM05D005766 ORTHO05D007002 8.2e-70 267.7 169 75.1
ClCG05G008560 Citrullus lanatus HOM05D005766 ORTHO05D007002 1.1e-69 267.3 169 71.6
Cpa.g.sc3.14 Carica papaya HOM05D005766 ORTHO05D007002 1.4e-69 266.9 202 65.8
Hma1.2p1_0327F.1_g126600 Hydrangea macrophylla HOM05D005766 ORTHO05D007002 1.8e-69 266.5 173 69.9
arahy.Tifrunner.gnm1.ann1.8957SA Arachis hypogaea HOM05D005766 ORTHO05D007002 3.1e-69 265.8 173 73.4
Gorai.008G272400 Gossypium raimondii HOM05D005766 ORTHO05D007002 3.1e-69 265.8 173 73.4
Ciclev10004767m.g Citrus clementina HOM05D005766 ORTHO05D007002 4.1e-69 265.4 165 77.6
Eucgr.K00307 Eucalyptus grandis HOM05D005766 ORTHO05D007002 7.0e-69 264.6 171 70.2
Potri.015G026100 Populus trichocarpa HOM05D005766 ORTHO05D007002 1.6e-68 263.5 173 70.5
CSS0041625 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 2.0e-68 263.1 173 72.3
Aqoxy5G04049 Aquilegia oxysepala HOM05D005766 ORTHO05D007002 5.0e-67 258.5 173 70.5
CSS0024367 Camellia sinensis var. sinensis HOM05D005766 ORTHO05D007002 1.1e-66 257.3 169 72.2
TPR.G7746 Trifolium pratense HOM05D005766 ORTHO05D007002 2.5e-66 256.1 175 70.9
Psat6g194960 Pisum sativum HOM05D000038 ORTHO05D007763 3.2e-66 255.8 175 72.0
Lj5g0016487 Lotus japonicus HOM05D005766 ORTHO05D007002 3.6e-65 252.3 170 71.8
arahy.Tifrunner.gnm1.ann1.M1FPNI Arachis hypogaea HOM05D005766 ORTHO05D007002 4.7e-65 251.9 178 68.5
ATR1131G022 Amborella trichopoda HOM05D005766 ORTHO05D007002 6.1e-65 251.5 169 67.5
Lsat_1_v5_gn_2_61121 Lactuca sativa HOM05D005766 ORTHO05D007002 1.8e-64 250.0 169 69.2
HanXRQChr14g0440221 Helianthus annuus HOM05D005766 ORTHO05D007002 5.2e-64 248.4 174 67.2
Sc13g0009390 Simmondsia chinensis HOM05D005766 ORTHO05D007002 6.8e-64 248.1 182 65.4
Ah.07g206240 Amaranthus hybridus HOM05D005766 ORTHO05D007002 1.2e-63 247.3 174 67.8
Phvul.007G077400 Phaseolus vulgaris HOM05D005766 ORTHO05D007002 2.6e-63 246.1 173 68.2
Nitab4.5_0001504g0110 Nicotiana tabacum HOM05D005766 ORTHO05D007002 5.7e-63 245.0 184 64.7
Glyma.20G164300 Glycine max HOM05D005766 ORTHO05D007002 2.8e-62 242.7 173 66.5
PGSC0003DMG400006615 Solanum tuberosum HOM05D005766 ORTHO05D007002 4.8e-62 241.9 186 61.3
Glyma.10G228700 Glycine max HOM05D005766 ORTHO05D007002 8.3e-62 241.1 172 66.3
Zm00001eb221900 Zea mays HOM05D005766 ORTHO05D007002 8.3e-62 241.1 171 65.5
Migut.F00259 Erythranthe guttata HOM05D005766 ORTHO05D007002 1.8e-61 240.0 171 64.9
Sopen12g011330 Solanum pennellii HOM05D005766 ORTHO05D007002 1.8e-61 240.0 179 60.9
SEGI_39054 Sequoiadendron giganteum HOM05D005766 ORTHO05D007002 2.4e-61 239.6 169 66.9
Lalb_Chr06g0161401 Lupinus albus HOM05D005766 ORTHO05D007002 4.1e-61 238.8 185 62.7
Solyc12g021310.3 Solanum lycopersicum HOM05D005766 ORTHO05D007002 4.1e-61 238.8 200 57.5
Cc02_g02130 Coffea canephora HOM05D005766 ORTHO05D007002 1.2e-60 237.3 169 66.3
Medtr1g099390 Medicago truncatula HOM05D005766 ORTHO05D007002 1.3e-59 233.8 177 63.3
unitig_37.g11976 Utricularia gibba HOM05D005766 ORTHO05D007002 6.5e-59 231.5 179 62.6
Ca_10701_v3 Cicer arietinum L. HOM05D005766 ORTHO05D007002 1.6e-57 226.9 180 63.9
SalBow4G0986 Salvia bowleyana HOM05D005766 ORTHO05D007002 1.2e-55 220.7 169 61.5
SGA_v2.0_scaffold192G40599 Striga asiatica HOM05D005766 ORTHO05D007002 1.5e-55 220.3 169 61.5
MBI07_g26934_MAGBIO Magnolia biondii HOM05D005766 ORTHO05D007002 5.4e-53 211.8 161 65.2
QL09p011987 Quercus lobata HOM05D005766 ORTHO05D007002 1.0e-51 207.6 175 60.0
AUR62021076 Chenopodium quinoa HOM05D005766 ORTHO05D007002 6.8e-48 194.9 133 72.2
AUR62031455 Chenopodium quinoa HOM05D000038 ORTHO05D007763 8.9e-48 194.5 133 72.2
Mapoly0113s0021 Marchantia polymorpha HOM05D005766 ORTHO05D007002 1.3e-46 190.7 173 49.1
Glyma.18G131400 Glycine max HOM05D005766 ORTHO05D007002 1.7e-46 190.3 174 55.7
DCAR_008901 Daucus carota HOM05D000149 ORTHO05D000076 4.1e-45 185.7 148 62.2
Os05g0299300 Oryza sativa ssp. japonica HOM05D005766 ORTHO05D007002 4.5e-44 182.2 130 63.8
CAN.G71.5 Capsicum annuum HOM05D005766 ORTHO05D007002 1.8e-40 170.2 130 63.8
SMO203G0206 Selaginella moellendorffii HOM05D005766 ORTHO05D007002 1.8e-40 170.2 168 47.0
Duzib084G0599 Durio zibethinus HOM05D005766 ORTHO05D007002 1.1e-34 151.0 114 70.2
arahy.Tifrunner.gnm1.ann1.DV56VC Arachis hypogaea HOM05D005766 ORTHO05D007002 5.6e-34 148.7 137 54.7
Actinidia08606 Actinidia chinensis HOM05D005766 ORTHO05D007002 1.2e-33 147.5 91 71.4
Cre01.g002700 Chlamydomonas reinhardtii HOM05D005766 ORTHO05D007002 2.1e-25 120.2 168 37.5
AagrBONN_evm.TU.Sc2ySwM_344.4899 Anthoceros agrestis HOM05D005766 ORTHO05D007002 4.7e-25 119.0 174 37.4
CiPaw.05G259700 Carya illinoinensis HOM05D005766 ORTHO05D007002 2.9e-22 109.8 60 75.0
ECA238G0894 Erigeron canadensis HOM05D005766 ORTHO05D000105 6.4e-22 108.6 81 56.8
arahy.Tifrunner.gnm1.ann1.XWQU4Z Arachis hypogaea HOM05D005766 ORTHO05D007002 1.7e-19 100.5 69 63.8
Dinv28359 Davidia involucrata HOM05D005766 ORTHO05D007002 8.6e-19 98.2 56 75.0
TPR.G27363 Trifolium pratense HOM05D005766 ORTHO05D007002 1.2e-17 94.4 58 75.9
arahy.Tifrunner.gnm1.ann1.118EZC Arachis hypogaea HOM05D005766 ORTHO05D007002 2.2e-14 83.6 56 67.9
arahy.Tifrunner.gnm1.ann1.AW6XP7 Arachis hypogaea HOM05D005766 ORTHO05D007002 5.1e-11 72.4 51 60.8
PRCOL_00006853 Prasinoderma coloniale HOM05D005766 ORTHO05D007002 1.1e-10 71.2 165 25.5
Oeu023563.1 Olea europaea HOM05D005766 ORTHO05D007002 4.8e-09 65.9 88 44.3
Glyma.08G028700 Glycine max HOM05D005766 ORTHO05D007002 2.4e-08 63.5 43 65.1
Oeu044897.1 Olea europaea HOM05D005766 ORTHO05D007002 9.0e-08 61.6 88 42.0
Oeu016993.1 Olea europaea HOM05D005766 ORTHO05D007002 1.2e-07 61.2 88 42.0
Oeu049881.1 Olea europaea HOM05D005766 ORTHO05D007002 2.0e-07 60.5 57 50.9


User provided reference genes

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