Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
RcHm_v2.0_Chr1g0379561 Rosa chinensis HOM05D000002 ORTHO05D050709 1.8e-46 189.1 113 100.0
RcHm_v2.0_Chr2g0165661 Rosa chinensis HOM05D000002 ORTHO05D050709 1.2e-42 176.4 113 94.7
FvH4_5g29991 Fragaria vesca HOM05D000002 ORTHO05D000001 2.5e-35 152.1 102 88.2
RcHm_v2.0_Chr1g0376911 Rosa chinensis HOM05D000002 ORTHO05D001544 2.5e-19 99.0 76 92.1
MD00G1044200 Malus domestica HOM05D000002 ORTHO05D001544 5.8e-16 87.8 112 58.0
Hma1.2p1_1846F.1_g305160 Hydrangea macrophylla HOM05D000002 ORTHO05D001544 2.0e-13 79.3 103 55.3
Ciclev10033628m.g Citrus clementina HOM05D000002 ORTHO05D001544 1.3e-12 76.6 107 48.6
Ciclev10006890m.g Citrus clementina HOM05D000002 ORTHO05D001544 3.9e-12 75.1 107 47.7
Manes.06G038551 Manihot esculenta HOM05D000002 ORTHO05D001544 8.9e-09 63.9 110 39.1
Ciclev10003960m.g Citrus clementina HOM05D000002 ORTHO05D001544 2.0e-08 62.8 96 46.9
Prupe.2G062600 Prunus persica HOM05D000002 ORTHO05D001544 2.0e-08 62.8 99 37.4
Manes.16G054725 Manihot esculenta HOM05D000002 ORTHO05D001544 2.6e-08 62.4 104 37.5
Sopen01g006740 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen01g021410 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen02g017450 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen04g011600 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen04g018310 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen04g023650 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen05g009710 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen05g021830 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen07g002700 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen09g020870 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen10g016600 Solanum pennellii HOM05D000002 ORTHO05D001544 5.8e-08 61.2 110 36.4
Sopen11g015120 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen11g015130 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen12g003850 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen12g003860 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen12g023960 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
Sopen12g023970 Solanum pennellii HOM05D000002 ORTHO05D000001 5.8e-08 61.2 110 36.4
SHI17833 Sapria himalayana HOM05D000002 ORTHO05D001544 1.7e-07 59.7 110 37.3
ECA246G3269 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-07 59.3 115 33.0
Manes.01G061550 Manihot esculenta HOM05D000002 ORTHO05D001544 2.2e-07 59.3 108 36.1
Manes.18G138908 Manihot esculenta HOM05D000002 ORTHO05D001544 2.2e-07 59.3 104 47.1
ECA248G0736 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.9e-07 58.9 115 35.7
SHI35727 Sapria himalayana HOM05D000002 ORTHO05D001544 2.9e-07 58.9 101 38.6
SHI46719 Sapria himalayana HOM05D000002 ORTHO05D001544 2.9e-07 58.9 101 38.6
Sopen01g011800 Solanum pennellii HOM05D000002 ORTHO05D001544 2.9e-07 58.9 110 35.5
SHI15516 Sapria himalayana HOM05D000002 ORTHO05D001544 4.9e-07 58.2 110 36.4
Sopen10g013010 Solanum pennellii HOM05D000002 ORTHO05D000001 4.9e-07 58.2 110 35.5
ECA238G2281 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-07 57.8 115 34.8
ECA238G3908 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-07 57.8 121 35.5
Manes.03G074416 Manihot esculenta HOM05D000002 ORTHO05D001544 6.4e-07 57.8 112 45.5
Manes.02G206750 Manihot esculenta HOM05D000002 ORTHO05D001544 8.3e-07 57.4 110 37.3
ECA246G1853 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.1e-06 57.0 105 32.4
ECA247G3199 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-06 57.0 115 33.9
SHI24155 Sapria himalayana HOM05D000002 ORTHO05D001544 1.1e-06 57.0 101 38.6
Sopen08g016350 Solanum pennellii HOM05D000002 ORTHO05D001544 1.1e-06 57.0 110 34.5
ECA236G3759 Erigeron canadensis HOM05D000002 ORTHO05D001544 1.4e-06 56.6 115 33.9
PGR042G1292 Punica granatum HOM05D000002 ORTHO05D001544 1.4e-06 56.6 108 40.7
ECA234G4265 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.9e-06 56.2 118 35.6
SHI26748 Sapria himalayana HOM05D000002 ORTHO05D001544 2.4e-06 55.8 108 37.0
ECA233G1034 Erigeron canadensis HOM05D000002 ORTHO05D001544 3.2e-06 55.5 115 33.0
ECA248G1064 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-06 55.5 118 36.4
Manes.05G117018 Manihot esculenta HOM05D000002 ORTHO05D001544 3.2e-06 55.5 104 34.6
ECA234G0077 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.1e-06 55.1 115 33.9
ECA240G2127 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.4e-06 54.7 108 34.3
Sopen04g026340 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-06 54.7 110 33.6
ECA247G0542 Erigeron canadensis HOM05D000006 ORTHO05D000001 7.1e-06 54.3 103 33.0
PGR031G0672 Punica granatum HOM05D000002 ORTHO05D001544 7.1e-06 54.3 102 45.1
ECA233G4558 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 53.9 120 33.3
ECA246G4187 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 53.9 118 30.5
ECA247G1915 Erigeron canadensis HOM05D000002 ORTHO05D001544 9.2e-06 53.9 115 32.2
ECA247G2276 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.2e-06 53.9 115 32.2
ECA248G1200 Erigeron canadensis HOM05D000002 ORTHO05D001544 9.2e-06 53.9 108 32.4


User provided reference genes

Program Settings